Os09g0517200
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Disease resistance protein family protein.
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Os09g0517200 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Disease resistance protein family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = precipitation,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 298.57 | 0.812 | 3.89 | 0.812 | 0.327 | -2.4 | 0.99 | -0.588 | 0.233 | 1.52 | 0.8574 | 621 | -- | -- |
| 298.47 | 0.805 | 3.89 | 0.809 | 0.319 | -2.54 | 1.03 | -- | 0.242 | 1.5 | 0.9969 | 624 | -- | -- |
| 302.09 | 0.81 | 3.88 | 0.786 | 0.336 | -2.35 | -- | -1.37 | 0.235 | 2.09 | 1 | 622 | -- | -- |
| 302.02 | 0.809 | 3.9 | 0.78 | 0.343 | -2.7 | -- | -- | 0.238 | 2.41 | 1 | 624 | -- | -- |
| 308.6 | 0.818 | 3.88 | 0.785 | -- | -2.35 | -- | -1.68 | 0.236 | -- | 1 | 624 | -- | -- |
| 336.83 | 0.86 | 3.91 | 1.11 | 0.402 | -- | 1.48 | -- | 0.168 | 1.11 | -- | -- | -- | -- |
| 345.57 | 0.871 | 3.92 | 1.06 | 0.412 | -- | -- | -- | 0.159 | 1.87 | -- | -- | -- | -- |
| 308.69 | 0.818 | 3.9 | 0.755 | -- | -2.82 | -- | -- | 0.235 | -- | 1.002 | 624 | -- | -- |
| 316.39 | 0.828 | 3.91 | -- | 0.328 | -3.05 | -- | -- | 0.163 | 2.24 | 0.9261 | 624 | -- | -- |
| 355.84 | 0.881 | 3.91 | 1.07 | -- | -- | -- | -- | 0.168 | -- | -- | -- | -- | -- |
| 374.93 | 0.906 | 3.94 | -- | 0.432 | -- | -- | -- | 0.0411 | 1.93 | -- | -- | -- | -- |
| 323.19 | 0.837 | 3.91 | -- | -- | -3.14 | -- | -- | 0.176 | -- | 0.8722 | 624 | -- | -- |
| 386.18 | 0.917 | 3.94 | -- | -- | -- | -- | -- | 0.0491 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 295.47 | humidity | 80.0 | 43200 | > th | dose dependent | rect. | 20 | 1 |
| 2 | 295.89 | radiation | 1.0 | 43200 | < th | dose independent | rect. | 3 | 3 |
| 7 | 295.95 | radiation | 1.0 | 43200 | > th | dose independent | rect. | 4 | 2 |
| 20 | 295.95 | radiation | 1.0 | 43200 | < th | dose independent | rect. | 19 | 11 |
| 22 | 296.82 | wind | 1.0 | 43200 | > th | dose dependent | rect. | 17 | 16 |
| 23 | 296.89 | wind | 1.0 | 43200 | > th | dose dependent | rect. | 18 | 14 |
| 24 | 296.92 | temperature | 30.0 | 43200 | > th | dose independent | rect. | 10 | 1 |
| 28 | 296.94 | temperature | 30.0 | 43200 | < th | dose independent | rect. | 9 | 2 |
| 30 | 296.97 | temperature | 30.0 | 43200 | < th | dose independent | rect. | 2 | 9 |
| 35 | 297.00 | temperature | 30.0 | 43200 | < th | dose independent | rect. | 7 | 4 |
| 56 | 297.01 | temperature | 30.0 | 43200 | < th | dose independent | rect. | 19 | 16 |
| 58 | 297.04 | humidity | 70.0 | 43200 | > th | dose dependent | rect. | 9 | 2 |
| 61 | 297.15 | temperature | 30.0 | 43200 | > th | dose dependent | rect. | 9 | 3 |
| 77 | 297.16 | wind | 1.0 | 43200 | > th | dose dependent | sin | 11 | NA |
| 82 | 297.21 | temperature | 30.0 | 43200 | > th | dose dependent | rect. | 9 | 1 |
| 93 | 297.26 | wind | 9.0 | 43200 | < th | dose dependent | rect. | 18 | 14 |
| 97 | 297.27 | humidity | 70.0 | 43200 | > th | dose dependent | rect. | 18 | 1 |
| 100 | 297.29 | wind | 9.0 | 43200 | < th | dose dependent | rect. | 17 | 16 |
| 137 | 297.49 | wind | 9.0 | 43200 | < th | dose dependent | sin | 11 | NA |
| 173 | 297.64 | humidity | 70.0 | 43200 | > th | dose dependent | rect. | 6 | 8 |
| 178 | 297.69 | temperature | 30.0 | 43200 | > th | dose dependent | sin | 8 | NA |
| 240 | 297.95 | humidity | 80.0 | 43200 | > th | dose dependent | rect. | 19 | 3 |
| 248 | 298.02 | humidity | 80.0 | 43200 | > th | dose independent | rect. | 8 | 4 |
| 278 | 298.32 | humidity | 90.0 | 43200 | < th | dose independent | rect. | 4 | 5 |
| 287 | 298.40 | temperature | 30.0 | 43200 | < th | dose independent | sin | 9 | NA |
| 289 | 298.41 | temperature | 30.0 | 43200 | > th | dose independent | sin | 9 | NA |
| 290 | 298.41 | humidity | 70.0 | 43200 | > th | dose dependent | rect. | 6 | 14 |
| 314 | 298.48 | humidity | 80.0 | 43200 | > th | dose dependent | rect. | 6 | 4 |
| 405 | 298.81 | humidity | 80.0 | 43200 | > th | dose independent | rect. | 8 | 14 |
| 436 | 298.91 | wind | 7.0 | 43200 | < th | dose dependent | rect. | 22 | 18 |
| 457 | 298.97 | humidity | 90.0 | 43200 | < th | dose independent | rect. | 3 | 12 |
| 474 | 299.02 | wind | 1.0 | 43200 | > th | dose dependent | rect. | 22 | 18 |
| 485 | 299.08 | wind | 3.0 | 43200 | > th | dose dependent | rect. | 6 | 1 |
| 530 | 299.20 | humidity | 80.0 | 43200 | < th | dose independent | rect. | 8 | 13 |
| 535 | 299.21 | temperature | 30.0 | 43200 | > th | dose dependent | no | NA | NA |
| 658 | 299.23 | wind | 3.0 | 43200 | > th | dose independent | rect. | 17 | 16 |
| 659 | 299.23 | temperature | 25.0 | 43200 | > th | dose dependent | rect. | 6 | 1 |
| 663 | 299.25 | wind | 3.0 | 43200 | > th | dose independent | rect. | 24 | 15 |
| 731 | 299.39 | humidity | 90.0 | 43200 | < th | dose independent | rect. | 3 | 9 |
| 797 | 299.49 | wind | 3.0 | 43200 | > th | dose independent | sin | 10 | NA |
| 817 | 299.54 | wind | 3.0 | 43200 | > th | dose independent | rect. | 17 | 18 |
| 826 | 299.56 | wind | 3.0 | 43200 | > th | dose independent | sin | 4 | NA |
| 831 | 299.57 | humidity | 90.0 | 43200 | > th | dose independent | rect. | 4 | 5 |
| 841 | 299.60 | wind | 3.0 | 43200 | < th | dose independent | rect. | 17 | 16 |
| 845 | 299.61 | humidity | 90.0 | 43200 | < th | dose independent | rect. | 6 | 2 |
| 848 | 299.61 | humidity | 70.0 | 43200 | > th | dose dependent | sin | 23 | NA |
| 854 | 299.62 | temperature | 25.0 | 43200 | > th | dose dependent | rect. | 1 | 1 |
| 866 | 299.65 | wind | 3.0 | 43200 | < th | dose independent | rect. | 24 | 15 |
| 867 | 299.65 | temperature | 25.0 | 43200 | > th | dose dependent | rect. | 1 | 3 |
| 889 | 299.69 | wind | 5.0 | 43200 | < th | dose dependent | sin | 4 | NA |
| 893 | 299.70 | temperature | 25.0 | 43200 | > th | dose dependent | rect. | 1 | 6 |
| 904 | 299.72 | precipitation | 0.1 | 30 | < th | dose independent | rect. | 3 | 23 |
| 910 | 299.72 | precipitation | 0.1 | 30 | < th | dose dependent | rect. | 3 | 23 |
| 940 | 299.77 | temperature | 25.0 | 43200 | > th | dose dependent | rect. | 21 | 7 |
| 955 | 299.79 | wind | 1.0 | 43200 | > th | dose dependent | sin | 4 | NA |
| 958 | 299.80 | precipitation | 0.1 | 720 | > th | dose independent | rect. | 6 | 22 |
| 967 | 299.81 | temperature | 25.0 | 43200 | > th | dose dependent | rect. | 3 | 1 |
| 974 | 299.83 | wind | 3.0 | 43200 | < th | dose independent | sin | 10 | NA |
| 980 | 299.84 | humidity | 80.0 | 43200 | < th | dose independent | rect. | 9 | 2 |
| 981 | 299.84 | precipitation | 0.1 | 720 | > th | dose independent | rect. | 8 | 20 |