Os09g0514900
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Protein of unknown function DUF654 family protein.
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Os09g0514900 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Protein of unknown function DUF654 family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 20.49 | 0.213 | 9.76 | 1.36 | 0.668 | -0.915 | -0.0909 | 2.02 | 0.224 | 13.4 | 8.675 | 339 | -- | -- |
| 23.13 | 0.224 | 9.8 | 1.07 | 0.47 | -0.8 | -0.0411 | -- | 0.14 | 13 | 8.61 | 786 | -- | -- |
| 20.51 | 0.211 | 9.76 | 1.36 | 0.656 | -0.916 | -- | 1.98 | 0.223 | 13.5 | 9.223 | 362 | -- | -- |
| 23.1 | 0.224 | 9.8 | 1.06 | 0.455 | -0.788 | -- | -- | 0.136 | 12.9 | 7.837 | 821 | -- | -- |
| 32.31 | 0.265 | 9.76 | 1.43 | -- | -1.04 | -- | 1.51 | 0.251 | -- | 15.59 | 928 | -- | -- |
| 31.29 | 0.262 | 9.82 | 0.851 | 0.577 | -- | 0.0448 | -- | 0.0122 | 12.1 | -- | -- | -- | -- |
| 31.3 | 0.262 | 9.82 | 0.852 | 0.577 | -- | -- | -- | 0.0125 | 12.1 | -- | -- | -- | -- |
| 34.44 | 0.273 | 9.79 | 1.13 | -- | -1.05 | -- | -- | 0.175 | -- | 12.77 | 929 | -- | -- |
| 48.78 | 0.325 | 9.83 | -- | 0.576 | -0.37 | -- | -- | -0.0399 | 12.7 | 10.04 | 397 | -- | -- |
| 52.24 | 0.338 | 9.83 | 0.834 | -- | -- | -- | -- | 0.0042 | -- | -- | -- | -- | -- |
| 50.45 | 0.332 | 9.84 | -- | 0.566 | -- | -- | -- | -0.0825 | 12 | -- | -- | -- | -- |
| 64.1 | 0.373 | 9.84 | -- | -- | -0.602 | -- | -- | -0.0105 | -- | 12.42 | 889 | -- | -- |
| 70.6 | 0.392 | 9.85 | -- | -- | -- | -- | -- | -0.0883 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 20.02 | temperature | 10 | 270 | > th | dose dependent | rect. | 23 | 23 |
| 2 | 20.09 | temperature | 10 | 720 | > th | dose dependent | rect. | 15 | 22 |
| 7 | 20.24 | temperature | 30 | 270 | < th | dose dependent | rect. | 3 | 23 |
| 8 | 20.25 | temperature | 15 | 270 | > th | dose dependent | rect. | 8 | 23 |
| 21 | 20.38 | temperature | 20 | 1440 | > th | dose dependent | rect. | 16 | 7 |
| 37 | 20.50 | temperature | 20 | 1440 | > th | dose dependent | rect. | 20 | 1 |
| 53 | 20.55 | temperature | 30 | 270 | < th | dose dependent | rect. | 14 | 23 |
| 55 | 20.56 | humidity | 90 | 14400 | > th | dose dependent | rect. | 21 | 7 |
| 57 | 20.56 | temperature | 10 | 720 | > th | dose dependent | rect. | 6 | 23 |
| 58 | 20.57 | temperature | 10 | 270 | > th | dose dependent | no | NA | NA |
| 63 | 20.59 | temperature | 30 | 270 | < th | dose dependent | no | NA | NA |
| 70 | 20.59 | temperature | 30 | 270 | < th | dose dependent | rect. | 11 | 23 |
| 76 | 20.61 | temperature | 10 | 1440 | > th | dose dependent | rect. | 20 | 2 |
| 82 | 20.62 | temperature | 30 | 1440 | < th | dose dependent | rect. | 21 | 1 |
| 90 | 20.63 | temperature | 10 | 1440 | > th | dose dependent | rect. | 17 | 6 |
| 99 | 20.64 | humidity | 90 | 14400 | > th | dose dependent | rect. | 19 | 10 |
| 105 | 20.64 | temperature | 30 | 270 | < th | dose dependent | rect. | 19 | 23 |
| 111 | 20.66 | radiation | 1 | 14400 | < th | dose dependent | rect. | 4 | 1 |
| 118 | 20.67 | temperature | 20 | 1440 | > th | dose dependent | sin | 15 | NA |
| 191 | 20.72 | temperature | 30 | 1440 | < th | dose dependent | rect. | 17 | 6 |
| 207 | 20.73 | wind | 9 | 43200 | < th | dose independent | rect. | 18 | 3 |
| 257 | 20.76 | temperature | 30 | 1440 | < th | dose dependent | rect. | 16 | 13 |
| 277 | 20.78 | radiation | 1 | 14400 | < th | dose independent | rect. | 18 | 12 |
| 356 | 20.82 | temperature | 20 | 1440 | > th | dose dependent | rect. | 17 | 1 |
| 376 | 20.83 | temperature | 30 | 1440 | < th | dose dependent | sin | 14 | NA |
| 420 | 20.84 | temperature | 15 | 720 | > th | dose dependent | rect. | 19 | 23 |
| 512 | 20.89 | wind | 9 | 43200 | > th | dose dependent | rect. | 18 | 3 |
| 538 | 20.89 | temperature | 30 | 30 | < th | dose dependent | rect. | 7 | 23 |
| 539 | 20.90 | wind | 9 | 43200 | > th | dose independent | rect. | 18 | 3 |
| 544 | 20.90 | wind | 9 | 43200 | > th | dose dependent | rect. | 18 | 5 |
| 566 | 20.90 | temperature | 30 | 720 | < th | dose dependent | rect. | 7 | 23 |
| 604 | 20.92 | radiation | 1 | 14400 | > th | dose independent | rect. | 18 | 1 |
| 615 | 20.92 | radiation | 1 | 14400 | < th | dose dependent | rect. | 18 | 1 |
| 645 | 20.93 | wind | 5 | 43200 | > th | dose independent | rect. | 13 | 12 |
| 647 | 20.93 | humidity | 90 | 14400 | > th | dose dependent | sin | 10 | NA |
| 682 | 20.94 | wind | 5 | 43200 | > th | dose independent | rect. | 14 | 8 |
| 729 | 20.95 | temperature | 30 | 1440 | < th | dose dependent | rect. | 11 | 19 |
| 779 | 20.97 | wind | 5 | 43200 | < th | dose independent | rect. | 13 | 12 |
| 786 | 20.97 | wind | 3 | 43200 | > th | dose dependent | rect. | 10 | 11 |
| 857 | 20.99 | wind | 5 | 43200 | < th | dose independent | rect. | 14 | 8 |
| 863 | 20.99 | wind | 3 | 43200 | > th | dose dependent | rect. | 10 | 7 |
| 895 | 21.00 | wind | 5 | 43200 | > th | dose independent | rect. | 11 | 6 |
| 897 | 21.00 | wind | 5 | 43200 | > th | dose independent | rect. | 11 | 10 |
| 940 | 21.01 | wind | 5 | 43200 | < th | dose independent | rect. | 11 | 10 |
| 976 | 21.02 | wind | 5 | 43200 | < th | dose independent | rect. | 11 | 6 |
| 981 | 21.02 | radiation | 1 | 14400 | > th | dose independent | rect. | 18 | 12 |