Os09g0512800
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Neural Wiskott-Aldrich syndrome protein (N-WASP).
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Os09g0512800 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Neural Wiskott-Aldrich syndrome protein (N-WASP).
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 44.2 | 0.312 | 11.9 | -0.911 | 0.0986 | 1.21 | 0.29 | -1.58 | -0.423 | 10.4 | 16.71 | 789 | -- | -- |
| 45.99 | 0.316 | 11.8 | -0.61 | 0.0821 | 1.19 | 0.581 | -- | -0.345 | 10.8 | 16.23 | 800 | -- | -- |
| 44.43 | 0.31 | 11.9 | -0.933 | 0.0993 | 1.21 | -- | -1.78 | -0.431 | 9.07 | 16.78 | 777 | -- | -- |
| 47.15 | 0.32 | 11.8 | -0.588 | 0.13 | 1.31 | -- | -- | -0.343 | 7.63 | 14.56 | 718 | -- | -- |
| 44.94 | 0.312 | 11.9 | -0.926 | -- | 1.14 | -- | -1.78 | -0.422 | -- | 16.54 | 813 | -- | -- |
| 68.05 | 0.387 | 11.8 | -0.27 | 0.172 | -- | -0.482 | -- | -0.138 | 22 | -- | -- | -- | -- |
| 68.87 | 0.389 | 11.8 | -0.25 | 0.182 | -- | -- | -- | -0.136 | 21.2 | -- | -- | -- | -- |
| 47.67 | 0.322 | 11.8 | -0.571 | -- | 1.2 | -- | -- | -0.326 | -- | 14.32 | 823 | -- | -- |
| 54.69 | 0.346 | 11.8 | -- | 0.421 | 1.21 | -- | -- | -0.254 | 0.61 | 14.56 | 718 | -- | -- |
| 70.79 | 0.393 | 11.8 | -0.249 | -- | -- | -- | -- | -0.137 | -- | -- | -- | -- | -- |
| 70.51 | 0.393 | 11.8 | -- | 0.182 | -- | -- | -- | -0.108 | 21.1 | -- | -- | -- | -- |
| 55.17 | 0.346 | 11.8 | -- | -- | 0.968 | -- | -- | -0.233 | -- | 15.12 | 756 | -- | -- |
| 72.43 | 0.397 | 11.8 | -- | -- | -- | -- | -- | -0.109 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 41.63 | temperature | 20 | 720 | > th | dose dependent | rect. | 21 | 19 |
| 6 | 42.16 | wind | 9 | 43200 | > th | dose dependent | rect. | 19 | 2 |
| 16 | 42.38 | temperature | 10 | 720 | > th | dose dependent | rect. | 21 | 21 |
| 18 | 42.59 | wind | 9 | 43200 | < th | dose independent | rect. | 18 | 3 |
| 35 | 43.02 | wind | 9 | 43200 | > th | dose independent | rect. | 19 | 2 |
| 42 | 43.10 | temperature | 10 | 720 | > th | dose dependent | rect. | 12 | 23 |
| 55 | 43.34 | temperature | 20 | 720 | > th | dose dependent | sin | 5 | NA |
| 74 | 43.67 | temperature | 20 | 1440 | > th | dose dependent | rect. | 15 | 6 |
| 102 | 43.86 | temperature | 20 | 1440 | > th | dose dependent | rect. | 17 | 2 |
| 123 | 43.97 | wind | 9 | 43200 | > th | dose dependent | rect. | 18 | 12 |
| 127 | 43.98 | temperature | 20 | 1440 | > th | dose dependent | rect. | 12 | 14 |
| 140 | 44.02 | temperature | 30 | 1440 | < th | dose dependent | rect. | 17 | 1 |
| 144 | 44.04 | temperature | 20 | 1440 | > th | dose dependent | sin | 17 | NA |
| 155 | 44.06 | temperature | 30 | 720 | < th | dose dependent | rect. | 24 | 21 |
| 219 | 44.31 | wind | 9 | 43200 | > th | dose dependent | rect. | 18 | 7 |
| 232 | 44.33 | temperature | 10 | 720 | > th | dose dependent | rect. | 3 | 23 |
| 233 | 44.35 | wind | 1 | 43200 | > th | dose dependent | rect. | 20 | 1 |
| 252 | 44.43 | wind | 9 | 43200 | < th | dose dependent | rect. | 20 | 1 |
| 288 | 44.52 | temperature | 15 | 720 | > th | dose dependent | rect. | 1 | 23 |
| 301 | 44.56 | temperature | 15 | 720 | > th | dose dependent | no | NA | NA |
| 343 | 44.68 | temperature | 20 | 1440 | > th | dose dependent | rect. | 3 | 19 |
| 402 | 44.77 | temperature | 20 | 30 | > th | dose dependent | rect. | 3 | 23 |
| 420 | 44.79 | temperature | 25 | 1440 | > th | dose independent | rect. | 15 | 6 |
| 490 | 44.89 | temperature | 20 | 270 | > th | dose dependent | rect. | 3 | 19 |
| 534 | 44.97 | temperature | 30 | 30 | < th | dose dependent | rect. | 9 | 23 |
| 544 | 45.01 | wind | 9 | 43200 | > th | dose independent | rect. | 18 | 7 |
| 568 | 45.06 | temperature | 25 | 1440 | < th | dose independent | rect. | 15 | 7 |
| 621 | 45.12 | temperature | 20 | 30 | > th | dose dependent | rect. | 1 | 23 |
| 750 | 45.30 | temperature | 30 | 720 | < th | dose dependent | rect. | 17 | 21 |
| 908 | 45.54 | wind | 9 | 43200 | < th | dose independent | rect. | 18 | 7 |