Os09g0511700
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Prunasin hydrolase isoform PH C precursor (EC 3.2.1.118).
FiT-DB / Search/ Help/ Sample detail
|
Os09g0511700 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Similar to Prunasin hydrolase isoform PH C precursor (EC 3.2.1.118).
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 155.35 | 0.586 | 7.97 | 1.11 | 0.857 | -1.65 | -1.15 | 2.04 | -0.514 | 15.3 | 26.17 | 5622 | -- | -- |
| 157.14 | 0.584 | 7.99 | 0.726 | 0.839 | -1.55 | -1.26 | -- | -0.44 | 15.2 | 23.76 | 5643 | -- | -- |
| 159.28 | 0.588 | 7.97 | 1.09 | 0.852 | -1.63 | -- | 2.1 | -0.517 | 15 | 26.2 | 5635 | -- | -- |
| 160.46 | 0.59 | 8.02 | 0.612 | 0.851 | -1.5 | -- | -- | -0.535 | 15 | 24.33 | 5655 | -- | -- |
| 199.46 | 0.658 | 7.98 | 1.03 | -- | -1.75 | -- | 1.88 | -0.56 | -- | 26.15 | 5554 | -- | -- |
| 238.08 | 0.723 | 8.06 | 0.0359 | 0.973 | -- | -0.879 | -- | -0.73 | 15.2 | -- | -- | -- | -- |
| 240.46 | 0.726 | 8.06 | 0.0178 | 0.966 | -- | -- | -- | -0.735 | 15 | -- | -- | -- | -- |
| 200.12 | 0.659 | 8.02 | 0.608 | -- | -1.64 | -- | -- | -0.576 | -- | 24.49 | 5528 | -- | -- |
| 169.42 | 0.606 | 8.02 | -- | 0.841 | -1.37 | -- | -- | -0.567 | 15 | 24.5 | 5658 | -- | -- |
| 294.07 | 0.801 | 8.06 | -0.0234 | -- | -- | -- | -- | -0.76 | -- | -- | -- | -- | -- |
| 240.47 | 0.725 | 8.06 | -- | 0.966 | -- | -- | -- | -0.737 | 15 | -- | -- | -- | -- |
| 206.12 | 0.669 | 8.08 | -- | -- | -1.35 | -- | -- | -0.845 | -- | 27.77 | 5553 | -- | -- |
| 294.09 | 0.8 | 8.06 | -- | -- | -- | -- | -- | -0.758 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 155.02 | temperature | 15 | 4320 | > th | dose dependent | rect. | 18 | 1 |
| 7 | 155.44 | temperature | 30 | 4320 | < th | dose dependent | rect. | 18 | 1 |
| 52 | 156.73 | temperature | 25 | 4320 | > th | dose independent | rect. | 7 | 1 |
| 56 | 156.84 | temperature | 20 | 4320 | > th | dose dependent | rect. | 17 | 11 |
| 72 | 157.28 | temperature | 20 | 4320 | > th | dose dependent | rect. | 1 | 3 |
| 73 | 157.29 | temperature | 20 | 4320 | > th | dose dependent | rect. | 3 | 1 |
| 91 | 157.65 | temperature | 25 | 4320 | < th | dose independent | rect. | 7 | 1 |
| 172 | 158.83 | temperature | 20 | 4320 | > th | dose dependent | sin | 12 | NA |
| 183 | 158.91 | temperature | 25 | 1440 | > th | dose independent | rect. | 19 | 2 |
| 187 | 158.96 | temperature | 25 | 1440 | < th | dose independent | rect. | 19 | 1 |
| 218 | 159.23 | temperature | 25 | 4320 | < th | dose independent | rect. | 19 | 3 |
| 235 | 159.35 | temperature | 20 | 720 | > th | dose dependent | rect. | 15 | 18 |
| 254 | 159.55 | temperature | 25 | 4320 | < th | dose independent | rect. | 19 | 5 |
| 285 | 159.80 | temperature | 25 | 4320 | > th | dose dependent | rect. | 7 | 1 |
| 303 | 159.92 | temperature | 25 | 4320 | < th | dose independent | rect. | 17 | 15 |
| 382 | 160.54 | temperature | 25 | 4320 | > th | dose independent | rect. | 17 | 15 |
| 421 | 160.78 | temperature | 30 | 4320 | > th | dose independent | rect. | 14 | 2 |
| 437 | 160.86 | temperature | 30 | 4320 | < th | dose independent | rect. | 14 | 2 |
| 698 | 162.17 | temperature | 25 | 4320 | < th | dose independent | sin | 13 | NA |
| 816 | 162.68 | temperature | 25 | 4320 | > th | dose independent | sin | 13 | NA |
| 985 | 163.25 | temperature | 30 | 4320 | < th | dose independent | rect. | 14 | 13 |
| 996 | 163.28 | temperature | 30 | 4320 | < th | dose independent | rect. | 14 | 10 |