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Os09g0510200

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Protein of unknown function DUF667 family protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 9.79 (0.0228) R2 : 0.6
β1 : 2.01 (0.0834) R2dD : 0.529 R2D : 0.351
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.706 (0.0486) R2dN8 : 0.248 R2N8 : 0.0708
σ : 0.428
deviance : 83.72
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = > th, dose dependency = dose independent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
60.63 0.366 9.88 1.36 0.39 0.141 0.588 -5.32 0.613 12.4 30.09 900 -- --
63.62 0.372 9.77 2.12 0.378 -0.326 0.704 -- 0.759 12.1 29.4 2434 -- --
62.11 0.367 9.88 1.36 0.387 0.141 -- -5.35 0.617 12.3 30.07 911 -- --
65.25 0.376 9.79 2.13 0.409 -0.407 -- -- 0.679 12.1 29.9 2419 -- --
70.96 0.392 9.92 1.29 -- 0.084 -- -5.83 0.596 -- 30.2 980 -- --
68.59 0.388 9.78 1.99 0.448 -- 0.786 -- 0.709 11.9 -- -- -- --
71.27 0.395 9.78 2.02 0.445 -- -- -- 0.712 11.9 -- -- -- --
72.81 0.397 9.78 2.07 -- -0.466 -- -- 0.716 -- 29.27 1089 -- --
170.81 0.612 9.87 -- 0.318 0.341 -- -- 0.311 10.1 24.3 1643 -- --
83.72 0.428 9.79 2.01 -- -- -- -- 0.706 -- -- -- -- --
179.17 0.626 9.83 -- 0.42 -- -- -- 0.487 11.7 -- -- -- --
108.53 0.485 9.92 -- -- 1.45 -- -- 0.145 -- 18.29 47520 -- --
190.27 0.644 9.84 -- -- -- -- -- 0.483 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 58.29 wind 1.0 270 > th dose independent rect. 10 8
2 58.31 humidity 70.0 270 > th dose independent rect. 17 8
4 58.46 radiation 10.0 90 < th dose dependent sin 3 NA
5 58.48 temperature 15.0 270 > th dose independent rect. 17 8
7 58.54 radiation 1.0 270 > th dose independent sin 7 NA
9 58.59 atmosphere 1000.0 270 > th dose independent rect. 17 8
10 58.65 temperature 30.0 270 < th dose independent rect. 17 8
13 58.70 atmosphere 1015.0 270 < th dose independent rect. 6 17
15 58.72 precipitation 0.1 270 < th dose independent rect. 13 16
16 58.72 precipitation 0.1 270 < th dose dependent rect. 13 16
17 58.75 radiation 10.0 90 < th dose dependent rect. 3 14
20 58.92 precipitation 0.1 270 < th dose independent rect. 11 18
21 58.92 precipitation 0.1 270 < th dose dependent rect. 11 18
26 58.97 temperature 15.0 270 > th dose independent rect. 18 16
27 58.97 radiation 1.0 270 < th dose dependent sin 6 NA
28 58.98 radiation 1.0 270 < th dose independent sin 7 NA
29 58.99 radiation 10.0 10 < th dose dependent sin 2 NA
39 59.09 atmosphere 995.0 270 > th dose independent rect. 6 17
41 59.11 radiation 1.0 270 < th dose independent rect. 23 8
43 59.13 radiation 10.0 90 < th dose dependent rect. 3 12
48 59.18 atmosphere 1015.0 270 < th dose independent rect. 5 20
49 59.18 humidity 50.0 270 > th dose dependent rect. 17 6
50 59.20 temperature 30.0 270 < th dose independent rect. 18 16
55 59.22 atmosphere 995.0 270 > th dose independent rect. 18 16
56 59.22 radiation 1.0 270 < th dose independent rect. 23 17
58 59.24 atmosphere 995.0 270 > th dose independent rect. 5 20
63 59.27 radiation 10.0 270 < th dose independent rect. 17 8
64 59.28 temperature 15.0 270 > th dose independent rect. 10 8
68 59.30 temperature 15.0 270 > th dose independent rect. 1 16
79 59.34 wind 9.0 270 < th dose independent rect. 13 16
85 59.36 radiation 10.0 270 < th dose dependent rect. 17 8
93 59.40 radiation 1.0 270 < th dose dependent rect. 23 9
99 59.43 radiation 1.0 270 < th dose dependent rect. 23 18
100 59.44 precipitation 0.1 270 < th dose independent rect. 23 7
101 59.44 wind 9.0 270 < th dose independent rect. 1 16
103 59.44 precipitation 0.1 270 < th dose dependent rect. 23 7
104 59.45 wind 9.0 270 < th dose independent rect. 10 8
115 59.49 temperature 15.0 10 > th dose independent rect. 20 7
117 59.49 temperature 10.0 270 > th dose independent rect. 5 8
118 59.49 atmosphere 995.0 270 > th dose independent rect. 5 8
119 59.49 atmosphere 1015.0 270 < th dose independent rect. 5 8
120 59.49 precipitation 0.1 270 < th dose independent rect. 5 8
121 59.49 temperature 10.0 270 > th dose independent rect. 13 16
123 59.49 precipitation 0.1 270 < th dose independent rect. 1 16
124 59.49 precipitation 0.1 270 < th dose dependent rect. 5 8
125 59.49 precipitation 0.1 270 < th dose dependent rect. 1 16
126 59.51 temperature 15.0 270 > th dose independent rect. 6 17
128 59.52 atmosphere 1000.0 90 > th dose independent rect. 19 8
132 59.53 wind 7.0 270 < th dose independent rect. 23 7
138 59.53 atmosphere 1015.0 270 < th dose independent rect. 1 16
151 59.57 atmosphere 1015.0 270 < th dose independent rect. 10 8
153 59.57 humidity 50.0 270 > th dose independent rect. 18 16
154 59.57 atmosphere 1015.0 270 < th dose independent rect. 18 16
167 59.60 temperature 15.0 270 > th dose independent rect. 5 20
172 59.63 temperature 10.0 270 > th dose independent rect. 23 7
173 59.63 temperature 30.0 270 < th dose independent rect. 23 7
174 59.63 humidity 50.0 270 > th dose independent rect. 23 7
177 59.63 atmosphere 1000.0 10 > th dose independent rect. 20 7
178 59.63 atmosphere 995.0 270 > th dose independent rect. 23 7
179 59.63 radiation 20.0 270 < th dose independent rect. 23 7
184 59.63 wind 1.0 270 > th dose independent rect. 1 16
189 59.64 precipitation 0.1 43200 > th dose dependent rect. 19 2
197 59.65 wind 9.0 270 < th dose independent rect. 5 8
202 59.66 wind 9.0 270 < th dose independent rect. 18 16
208 59.69 precipitation 0.1 270 < th dose independent rect. 1 4
212 59.69 wind 9.0 270 < th dose independent rect. 17 8
214 59.69 precipitation 0.1 270 < th dose dependent rect. 1 4
219 59.70 radiation 10.0 10 < th dose dependent rect. 3 15
228 59.73 wind 9.0 270 < th dose independent rect. 5 6
231 59.74 wind 7.0 270 < th dose independent rect. 1 4
232 59.75 humidity 50.0 270 > th dose independent rect. 5 6
234 59.76 precipitation 0.1 43200 > th dose dependent rect. 17 3
235 59.76 radiation 1.0 270 < th dose dependent rect. 1 4
242 59.80 temperature 10.0 270 > th dose independent rect. 1 4
244 59.80 temperature 30.0 270 < th dose independent rect. 1 4
245 59.80 humidity 50.0 270 > th dose independent rect. 1 4
248 59.80 atmosphere 995.0 270 > th dose independent rect. 1 4
249 59.80 atmosphere 1010.0 270 < th dose independent rect. 1 4
251 59.80 radiation 20.0 270 < th dose independent rect. 1 4
257 59.80 radiation 40.0 270 < th dose dependent rect. 1 4
259 59.81 radiation 1.0 270 < th dose independent rect. 1 4
262 59.81 atmosphere 1015.0 270 < th dose independent rect. 17 8
272 59.83 wind 9.0 270 < th dose independent rect. 6 17
274 59.84 precipitation 0.1 270 < th dose independent rect. 10 8
277 59.84 precipitation 0.1 270 < th dose dependent rect. 10 8
278 59.85 atmosphere 1010.0 270 < th dose independent rect. 18 6
294 59.90 radiation 1.0 270 > th dose independent rect. 5 6
337 59.93 radiation 10.0 10 < th dose dependent rect. 3 17
349 59.97 atmosphere 1010.0 10 < th dose independent rect. 20 7
370 60.00 wind 9.0 270 < th dose independent rect. 5 20
413 60.07 wind 1.0 270 > th dose independent rect. 1 4
438 60.11 temperature 10.0 10 > th dose dependent rect. 20 7
480 60.18 temperature 10.0 270 > th dose dependent rect. 1 4
512 60.22 precipitation 0.1 10 < th dose independent rect. 3 17
514 60.22 precipitation 0.1 10 < th dose dependent rect. 3 17
547 60.25 wind 9.0 270 < th dose dependent rect. 23 6
559 60.27 wind 9.0 270 < th dose dependent rect. 1 4
578 60.30 wind 1.0 270 > th dose independent rect. 12 17
592 60.31 precipitation 0.1 14400 > th dose independent rect. 6 17
593 60.31 precipitation 0.1 14400 < th dose independent rect. 6 17
601 60.31 precipitation 0.1 14400 < th dose dependent rect. 6 17
622 60.34 radiation 10.0 90 < th dose dependent rect. 3 6
631 60.35 humidity 50.0 270 > th dose dependent rect. 23 6
632 60.35 atmosphere 995.0 270 > th dose dependent rect. 17 6
636 60.36 radiation 1.0 90 < th dose independent rect. 3 15
651 60.38 wind 1.0 270 > th dose independent rect. 17 7
655 60.38 precipitation 0.1 270 < th dose independent rect. 17 8
661 60.38 precipitation 0.1 270 < th dose dependent rect. 17 8
672 60.40 atmosphere 1015.0 270 < th dose independent rect. 23 7
675 60.40 radiation 10.0 10 < th dose dependent rect. 3 13
680 60.41 humidity 50.0 270 > th dose dependent rect. 1 4
690 60.42 precipitation 0.1 14400 > th dose dependent rect. 6 18
704 60.44 humidity 70.0 10 > th dose independent rect. 18 9
709 60.44 atmosphere 1015.0 10 < th dose dependent rect. 12 8
766 60.49 atmosphere 995.0 90 > th dose dependent rect. 18 8
781 60.51 wind 1.0 270 > th dose independent rect. 18 5
784 60.51 wind 9.0 270 < th dose dependent rect. 5 6
791 60.52 radiation 40.0 1440 < th dose independent rect. 3 5
798 60.52 temperature 10.0 270 > th dose dependent rect. 18 6
844 60.53 wind 9.0 270 < th dose dependent rect. 5 8
870 60.55 radiation 30.0 10 < th dose dependent rect. 2 7
885 60.57 wind 1.0 10 > th dose independent rect. 12 8
889 60.57 atmosphere 1015.0 90 < th dose dependent rect. 13 17
908 60.58 temperature 30.0 270 < th dose independent rect. 5 20
935 60.59 temperature 30.0 10 < th dose independent rect. 20 7
937 60.59 humidity 50.0 10 > th dose independent rect. 20 7
941 60.59 radiation 1.0 10 < th dose independent rect. 20 7
946 60.59 precipitation 0.1 14400 < th dose independent rect. 16 7
947 60.59 temperature 10.0 10 > th dose independent rect. 3 17
949 60.59 atmosphere 1015.0 10 < th dose independent rect. 3 17
956 60.59 radiation 1.0 10 < th dose dependent rect. 20 7
961 60.59 precipitation 0.1 14400 < th dose dependent rect. 16 7
971 60.60 precipitation 0.1 14400 > th dose independent rect. 16 7
986 60.61 wind 9.0 10 < th dose independent rect. 20 7
993 60.61 precipitation 0.1 14400 > th dose dependent rect. 12 12