Os09g0509100
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : No apical meristem (NAM) protein domain containing protein.
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Os09g0509100 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : No apical meristem (NAM) protein domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 51.7 | 0.338 | 13.3 | 0.689 | 0.456 | 0.383 | -0.627 | -6.39 | 0.205 | 6.04 | 26.63 | 4315 | -- | -- |
| 54.03 | 0.342 | 13.1 | 2.18 | 0.485 | -0.682 | -1.02 | -- | 0.53 | 5.97 | 34.75 | 18670 | -- | -- |
| 52.54 | 0.338 | 13.3 | 0.677 | 0.456 | 0.38 | -- | -6.44 | 0.206 | 5.68 | 26.66 | 4304 | -- | -- |
| 52.96 | 0.339 | 13 | 2.25 | 0.412 | -0.692 | -- | -- | 0.717 | 5.62 | 33.2 | 17494 | -- | -- |
| 63.26 | 0.37 | 13.3 | 0.721 | -- | 0.368 | -- | -6.19 | 0.217 | -- | 26.49 | 4329 | -- | -- |
| 63.06 | 0.372 | 13.1 | 2.01 | 0.427 | -- | -0.726 | -- | 0.454 | 6.22 | -- | -- | -- | -- |
| 64.24 | 0.375 | 13.1 | 2 | 0.427 | -- | -- | -- | 0.456 | 5.83 | -- | -- | -- | -- |
| 62.79 | 0.369 | 13 | 2.32 | -- | -0.649 | -- | -- | 0.71 | -- | 32.34 | 20670 | -- | -- |
| 104.07 | 0.475 | 13.2 | -- | 0.426 | 1.3 | -- | -- | -0.156 | 6.01 | -6.855 | 47520 | -- | -- |
| 73.67 | 0.401 | 13.1 | 2.01 | -- | -- | -- | -- | 0.466 | -- | -- | -- | -- | -- |
| 169.58 | 0.609 | 13.1 | -- | 0.458 | -- | -- | -- | 0.233 | 5.62 | -- | -- | -- | -- |
| 113.47 | 0.496 | 13.2 | -- | -- | 1.32 | -- | -- | -0.152 | -- | 7.231 | 47520 | -- | -- |
| 180.48 | 0.627 | 13.1 | -- | -- | -- | -- | -- | 0.242 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 48.30 | wind | 1 | 43200 | < th | dose independent | rect. | 2 | 5 |
| 2 | 48.37 | wind | 1 | 43200 | > th | dose independent | rect. | 2 | 5 |
| 3 | 48.71 | wind | 1 | 43200 | < th | dose dependent | rect. | 2 | 5 |
| 5 | 48.92 | wind | 1 | 43200 | > th | dose independent | rect. | 3 | 3 |
| 18 | 49.63 | radiation | 20 | 14400 | < th | dose independent | rect. | 7 | 1 |
| 20 | 49.87 | radiation | 20 | 14400 | < th | dose independent | rect. | 21 | 11 |
| 23 | 49.89 | radiation | 20 | 14400 | < th | dose independent | rect. | 5 | 3 |
| 28 | 49.90 | radiation | 20 | 14400 | < th | dose independent | rect. | 24 | 8 |
| 46 | 49.93 | wind | 1 | 43200 | < th | dose dependent | rect. | 4 | 2 |
| 52 | 50.13 | radiation | 20 | 14400 | > th | dose independent | rect. | 7 | 1 |
| 57 | 50.21 | humidity | 80 | 14400 | < th | dose dependent | rect. | 19 | 3 |
| 61 | 50.23 | wind | 1 | 14400 | > th | dose dependent | rect. | 14 | 1 |
| 79 | 50.29 | temperature | 25 | 14400 | > th | dose dependent | rect. | 8 | 1 |
| 85 | 50.40 | wind | 9 | 14400 | < th | dose dependent | rect. | 14 | 1 |
| 131 | 50.60 | humidity | 80 | 14400 | > th | dose independent | rect. | 20 | 2 |
| 132 | 50.60 | radiation | 40 | 14400 | > th | dose dependent | rect. | 12 | 1 |
| 137 | 50.63 | radiation | 20 | 14400 | > th | dose dependent | rect. | 7 | 2 |
| 173 | 50.74 | radiation | 30 | 14400 | < th | dose dependent | rect. | 8 | 1 |
| 196 | 50.79 | temperature | 30 | 14400 | < th | dose independent | rect. | 24 | 14 |
| 202 | 50.79 | temperature | 30 | 14400 | > th | dose dependent | rect. | 12 | 1 |
| 205 | 50.80 | temperature | 30 | 14400 | < th | dose independent | rect. | 8 | 6 |
| 208 | 50.80 | temperature | 30 | 14400 | < th | dose independent | rect. | 4 | 9 |
| 230 | 50.81 | temperature | 25 | 14400 | > th | dose dependent | rect. | 20 | 16 |
| 233 | 50.82 | humidity | 70 | 43200 | < th | dose independent | rect. | 17 | 16 |
| 234 | 50.82 | temperature | 30 | 14400 | > th | dose independent | rect. | 18 | 20 |
| 237 | 50.83 | temperature | 30 | 14400 | < th | dose independent | sin | 7 | NA |
| 238 | 50.83 | humidity | 70 | 43200 | < th | dose independent | rect. | 17 | 6 |
| 245 | 50.84 | temperature | 30 | 14400 | < th | dose independent | rect. | 12 | 1 |
| 246 | 50.84 | humidity | 70 | 43200 | < th | dose independent | rect. | 17 | 3 |
| 249 | 50.84 | temperature | 30 | 14400 | > th | dose independent | rect. | 8 | 6 |
| 282 | 50.85 | temperature | 25 | 14400 | > th | dose dependent | sin | 7 | NA |
| 287 | 50.86 | temperature | 30 | 14400 | > th | dose independent | rect. | 12 | 2 |
| 289 | 50.86 | humidity | 80 | 14400 | < th | dose independent | rect. | 20 | 2 |
| 330 | 50.89 | temperature | 30 | 14400 | > th | dose independent | sin | 7 | NA |
| 346 | 50.91 | temperature | 25 | 14400 | > th | dose independent | rect. | 6 | 2 |
| 354 | 50.92 | temperature | 30 | 14400 | < th | dose independent | rect. | 9 | 1 |
| 405 | 50.94 | humidity | 80 | 14400 | > th | dose independent | rect. | 19 | 5 |
| 442 | 50.95 | humidity | 70 | 43200 | < th | dose independent | rect. | 18 | 1 |
| 486 | 50.97 | temperature | 30 | 14400 | > th | dose independent | rect. | 10 | 1 |
| 487 | 50.97 | temperature | 25 | 14400 | < th | dose independent | rect. | 6 | 1 |
| 543 | 51.00 | humidity | 70 | 43200 | > th | dose independent | rect. | 17 | 3 |
| 567 | 51.02 | radiation | 40 | 14400 | > th | dose dependent | rect. | 10 | 4 |
| 625 | 51.07 | humidity | 80 | 14400 | < th | dose independent | rect. | 19 | 5 |
| 630 | 51.08 | radiation | 20 | 14400 | < th | dose independent | sin | 11 | NA |
| 708 | 51.11 | temperature | 25 | 14400 | > th | dose dependent | rect. | 6 | 19 |
| 724 | 51.12 | radiation | 40 | 14400 | > th | dose dependent | rect. | 12 | 23 |
| 748 | 51.13 | temperature | 25 | 14400 | > th | dose dependent | rect. | 12 | 23 |
| 786 | 51.15 | temperature | 25 | 14400 | > th | dose dependent | no | NA | NA |
| 833 | 51.16 | radiation | 40 | 14400 | > th | dose dependent | rect. | 12 | 20 |
| 928 | 51.19 | humidity | 70 | 43200 | > th | dose independent | rect. | 17 | 16 |
| 937 | 51.19 | radiation | 40 | 14400 | < th | dose dependent | rect. | 21 | 12 |