Os09g0508200
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Pollen Ole e 1 allergen and extensin domain containing protein.
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Os09g0508200 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Pollen Ole e 1 allergen and extensin domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = precipitation,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 178.62 | 0.628 | 2.86 | -0.00739 | 0.111 | -0.432 | 0.526 | -0.955 | 0.215 | 16.2 | 0.2197 | 7362 | -- | -- |
| 179.64 | 0.624 | 2.86 | 0.064 | 0.104 | -0.438 | 0.549 | -- | 0.232 | 16.1 | 0.2642 | 7740 | -- | -- |
| 179.37 | 0.624 | 2.86 | -0.00292 | 0.114 | -0.428 | -- | -0.964 | 0.217 | 15.8 | 0.1727 | 7340 | -- | -- |
| 180.17 | 0.625 | 2.86 | 0.0408 | 0.113 | -0.467 | -- | -- | 0.237 | 15.7 | 0.9778 | 7740 | -- | -- |
| 180.09 | 0.625 | 2.86 | -0.00732 | -- | -0.433 | -- | -0.953 | 0.214 | -- | 0.3098 | 7340 | -- | -- |
| 185.48 | 0.638 | 2.88 | 0.105 | 0.124 | -- | 0.47 | -- | 0.152 | 15.9 | -- | -- | -- | -- |
| 186.11 | 0.639 | 2.88 | 0.112 | 0.126 | -- | -- | -- | 0.154 | 15.5 | -- | -- | -- | -- |
| 180.87 | 0.626 | 2.86 | 0.0488 | -- | -0.499 | -- | -- | 0.233 | -- | 1 | 7616 | -- | -- |
| 180.21 | 0.625 | 2.86 | -- | 0.114 | -0.498 | -- | -- | 0.233 | 15.5 | 1 | 7736 | -- | -- |
| 187 | 0.639 | 2.88 | 0.106 | -- | -- | -- | -- | 0.151 | -- | -- | -- | -- | -- |
| 186.44 | 0.639 | 2.88 | -- | 0.124 | -- | -- | -- | 0.142 | 15.5 | -- | -- | -- | -- |
| 180.92 | 0.626 | 2.86 | -- | -- | -0.503 | -- | -- | 0.235 | -- | 1 | 7616 | -- | -- |
| 187.3 | 0.639 | 2.88 | -- | -- | -- | -- | -- | 0.139 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 164.37 | wind | 5.0 | 10 | > th | dose independent | rect. | 10 | 1 |
| 5 | 164.37 | wind | 5.0 | 10 | > th | dose dependent | rect. | 10 | 1 |
| 9 | 164.54 | wind | 7.0 | 90 | > th | dose dependent | rect. | 8 | 1 |
| 27 | 164.95 | humidity | 90.0 | 90 | > th | dose independent | rect. | 8 | 1 |
| 32 | 165.34 | humidity | 90.0 | 90 | > th | dose dependent | rect. | 8 | 1 |
| 40 | 166.50 | wind | 9.0 | 90 | > th | dose dependent | rect. | 22 | 12 |
| 98 | 172.06 | atmosphere | 1005.0 | 90 | < th | dose independent | rect. | 10 | 1 |
| 113 | 173.35 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 22 | 6 |
| 114 | 173.35 | precipitation | 0.1 | 4320 | < th | dose dependent | rect. | 22 | 6 |
| 115 | 173.42 | precipitation | 0.1 | 4320 | > th | dose independent | rect. | 22 | 6 |
| 120 | 173.58 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 20 | 8 |
| 146 | 174.25 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 22 | 5 |
| 163 | 174.65 | wind | 9.0 | 720 | > th | dose dependent | rect. | 22 | 12 |
| 183 | 174.88 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 20 | 13 |
| 191 | 174.94 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 20 | 17 |
| 192 | 174.95 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 21 | 12 |
| 193 | 174.95 | precipitation | 0.1 | 4320 | < th | dose dependent | rect. | 21 | 12 |
| 195 | 174.97 | precipitation | 0.1 | 4320 | > th | dose independent | rect. | 21 | 12 |
| 221 | 175.11 | precipitation | 0.1 | 4320 | > th | dose independent | rect. | 23 | 1 |
| 222 | 175.11 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 23 | 1 |
| 235 | 175.34 | wind | 9.0 | 90 | > th | dose independent | rect. | 19 | 15 |
| 263 | 175.51 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 23 | 1 |
| 264 | 175.51 | precipitation | 0.1 | 4320 | < th | dose dependent | rect. | 23 | 1 |
| 276 | 175.59 | wind | 1.0 | 90 | < th | dose dependent | rect. | 4 | 1 |
| 298 | 175.71 | atmosphere | 1005.0 | 270 | < th | dose independent | rect. | 8 | 3 |
| 329 | 175.96 | precipitation | 0.1 | 4320 | > th | dose independent | rect. | 2 | 2 |
| 338 | 176.02 | wind | 1.0 | 90 | < th | dose independent | rect. | 4 | 1 |
| 339 | 176.03 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 2 | 2 |
| 340 | 176.03 | precipitation | 0.1 | 4320 | < th | dose dependent | rect. | 2 | 2 |
| 348 | 176.11 | radiation | 1.0 | 4320 | < th | dose dependent | rect. | 23 | 1 |
| 364 | 176.20 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 2 | 1 |
| 488 | 177.11 | radiation | 40.0 | 30 | < th | dose independent | rect. | 14 | 1 |
| 493 | 177.13 | atmosphere | 1005.0 | 30 | > th | dose dependent | rect. | 14 | 1 |
| 503 | 177.18 | temperature | 30.0 | 30 | < th | dose independent | rect. | 14 | 1 |
| 519 | 177.22 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 15 | 1 |
| 526 | 177.22 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 16 | 23 |
| 532 | 177.23 | atmosphere | 1000.0 | 30 | > th | dose independent | rect. | 14 | 1 |
| 537 | 177.26 | precipitation | 0.1 | 4320 | > th | dose independent | sin | 8 | NA |
| 538 | 177.26 | precipitation | 0.1 | 4320 | < th | dose independent | sin | 8 | NA |
| 540 | 177.26 | precipitation | 0.1 | 4320 | < th | dose dependent | sin | 8 | NA |
| 542 | 177.27 | humidity | 60.0 | 30 | > th | dose independent | rect. | 14 | 1 |
| 558 | 177.34 | wind | 1.0 | 30 | > th | dose independent | rect. | 14 | 1 |
| 583 | 177.44 | radiation | 30.0 | 30 | > th | dose independent | rect. | 14 | 1 |
| 587 | 177.45 | wind | 9.0 | 30 | < th | dose independent | rect. | 14 | 1 |
| 588 | 177.45 | temperature | 10.0 | 30 | > th | dose independent | rect. | 14 | 1 |
| 592 | 177.45 | atmosphere | 1010.0 | 30 | < th | dose independent | rect. | 14 | 1 |
| 594 | 177.45 | radiation | 1.0 | 30 | > th | dose independent | rect. | 14 | 1 |
| 595 | 177.45 | precipitation | 0.1 | 30 | < th | dose independent | rect. | 14 | 1 |
| 597 | 177.45 | temperature | 10.0 | 30 | > th | dose independent | rect. | 15 | 23 |
| 598 | 177.45 | precipitation | 0.1 | 30 | < th | dose dependent | rect. | 14 | 1 |
| 605 | 177.46 | humidity | 50.0 | 30 | > th | dose dependent | rect. | 14 | 1 |
| 613 | 177.51 | wind | 1.0 | 30 | > th | dose dependent | rect. | 14 | 1 |
| 629 | 177.57 | wind | 5.0 | 30 | > th | dose independent | rect. | 14 | 1 |
| 630 | 177.57 | temperature | 10.0 | 30 | > th | dose dependent | rect. | 14 | 1 |
| 645 | 177.63 | humidity | 90.0 | 30 | < th | dose independent | rect. | 14 | 1 |
| 653 | 177.66 | wind | 9.0 | 30 | < th | dose dependent | rect. | 14 | 1 |
| 655 | 177.67 | precipitation | 0.1 | 14400 | > th | dose dependent | sin | 7 | NA |
| 672 | 177.71 | radiation | 1.0 | 30 | > th | dose dependent | rect. | 14 | 1 |
| 688 | 177.76 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 2 | 12 |
| 693 | 177.78 | humidity | 90.0 | 30 | < th | dose dependent | rect. | 14 | 1 |
| 707 | 177.83 | temperature | 25.0 | 270 | > th | dose independent | rect. | 8 | 1 |
| 771 | 177.96 | humidity | 90.0 | 720 | > th | dose independent | rect. | 8 | 1 |
| 787 | 177.98 | wind | 5.0 | 720 | < th | dose independent | rect. | 1 | 10 |
| 802 | 178.00 | atmosphere | 1015.0 | 30 | < th | dose dependent | rect. | 14 | 1 |
| 852 | 178.07 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 3 | 7 |
| 920 | 178.14 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 2 | 12 |
| 933 | 178.15 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 2 | 12 |
| 939 | 178.15 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 2 | 12 |
| 951 | 178.17 | temperature | 25.0 | 90 | > th | dose dependent | rect. | 10 | 2 |