Os09g0508000
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os09g0508000 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = radiation,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 58.1 | 0.358 | 9.11 | 0.0315 | 0.939 | -0.446 | -1.22 | -0.0377 | -0.328 | 20.4 | 0.1894 | 38 | -- | -- |
| 58.09 | 0.355 | 9.11 | 0.0336 | 0.94 | -0.447 | -1.18 | -- | -0.328 | 20.4 | 0.19 | 39 | -- | -- |
| 59.88 | 0.363 | 9.11 | 0.0646 | 0.93 | -0.411 | -- | 0.655 | -0.32 | 20.7 | 0.8283 | 36 | -- | -- |
| 62.43 | 0.368 | 9.11 | 0.0648 | 0.931 | -0.454 | -- | -- | -0.332 | 20.4 | 0.19 | 41 | -- | -- |
| 86.41 | 0.435 | 9.08 | 0.0793 | -- | -0.857 | -- | 0.717 | -0.321 | -- | 0.8283 | 36 | -- | -- |
| 62.83 | 0.372 | 9.12 | -0.00802 | 1.33 | -- | -0.999 | -- | -0.335 | 21.6 | -- | -- | -- | -- |
| 66.52 | 0.382 | 9.12 | 0.0283 | 1.33 | -- | -- | -- | -0.334 | 21.7 | -- | -- | -- | -- |
| 89.77 | 0.443 | 9.08 | 0.0695 | -- | -0.853 | -- | -- | -0.325 | -- | 0.8283 | 36 | -- | -- |
| 62.54 | 0.368 | 9.12 | -- | 0.946 | -0.44 | -- | -- | -0.338 | 20.5 | 0.183 | 41 | -- | -- |
| 171.73 | 0.612 | 9.09 | 0.0398 | -- | -- | -- | -- | -0.336 | -- | -- | -- | -- | -- |
| 66.55 | 0.382 | 9.12 | -- | 1.33 | -- | -- | -- | -0.337 | 21.7 | -- | -- | -- | -- |
| 89.9 | 0.443 | 9.09 | -- | -- | -0.852 | -- | -- | -0.333 | -- | 0.8283 | 36 | -- | -- |
| 171.77 | 0.612 | 9.09 | -- | -- | -- | -- | -- | -0.341 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 51.20 | atmosphere | 1000.0 | 10 | > th | dose dependent | rect. | 5 | 4 |
| 4 | 51.51 | temperature | 20.0 | 30 | > th | dose independent | rect. | 5 | 17 |
| 7 | 51.63 | atmosphere | 1000.0 | 270 | > th | dose dependent | rect. | 5 | 1 |
| 12 | 52.08 | radiation | 10.0 | 30 | < th | dose dependent | sin | 10 | NA |
| 14 | 52.11 | atmosphere | 1015.0 | 10 | < th | dose independent | rect. | 22 | 7 |
| 15 | 52.13 | wind | 3.0 | 90 | < th | dose dependent | rect. | 5 | 2 |
| 16 | 52.13 | wind | 7.0 | 90 | < th | dose dependent | rect. | 5 | 4 |
| 17 | 52.14 | atmosphere | 995.0 | 270 | > th | dose dependent | rect. | 3 | 4 |
| 23 | 52.20 | wind | 5.0 | 10 | < th | dose independent | rect. | 5 | 4 |
| 26 | 52.23 | wind | 3.0 | 270 | < th | dose independent | rect. | 5 | 1 |
| 32 | 52.26 | radiation | 1.0 | 30 | > th | dose independent | sin | 10 | NA |
| 33 | 52.26 | temperature | 10.0 | 10 | > th | dose dependent | rect. | 5 | 4 |
| 42 | 52.36 | wind | 9.0 | 10 | < th | dose independent | rect. | 5 | 17 |
| 44 | 52.41 | temperature | 15.0 | 270 | > th | dose independent | rect. | 3 | 18 |
| 50 | 52.46 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 5 | 1 |
| 51 | 52.49 | atmosphere | 1015.0 | 10 | < th | dose independent | rect. | 9 | 20 |
| 64 | 52.58 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 7 | 10 |
| 65 | 52.59 | wind | 5.0 | 270 | < th | dose independent | rect. | 3 | 4 |
| 71 | 52.67 | radiation | 1.0 | 10 | < th | dose independent | rect. | 22 | 8 |
| 73 | 52.68 | humidity | 50.0 | 270 | > th | dose independent | rect. | 17 | 14 |
| 74 | 52.68 | precipitation | 0.1 | 10 | < th | dose independent | rect. | 5 | 17 |
| 75 | 52.68 | precipitation | 0.1 | 10 | < th | dose dependent | rect. | 5 | 17 |
| 76 | 52.69 | radiation | 1.0 | 90 | > th | dose independent | rect. | 4 | 3 |
| 83 | 52.69 | temperature | 10.0 | 270 | > th | dose independent | rect. | 7 | 10 |
| 84 | 52.69 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 7 | 10 |
| 88 | 52.69 | temperature | 10.0 | 270 | > th | dose independent | rect. | 17 | 14 |
| 89 | 52.69 | radiation | 40.0 | 270 | < th | dose independent | rect. | 17 | 14 |
| 93 | 52.71 | radiation | 10.0 | 10 | < th | dose dependent | rect. | 22 | 8 |
| 94 | 52.72 | atmosphere | 995.0 | 10 | > th | dose independent | rect. | 9 | 20 |
| 96 | 52.73 | atmosphere | 1005.0 | 270 | > th | dose independent | rect. | 5 | 1 |
| 100 | 52.74 | wind | 9.0 | 270 | < th | dose independent | rect. | 17 | 14 |
| 101 | 52.75 | precipitation | 0.1 | 10 | < th | dose independent | rect. | 5 | 4 |
| 102 | 52.75 | precipitation | 0.1 | 10 | < th | dose dependent | rect. | 5 | 4 |
| 108 | 52.77 | temperature | 10.0 | 10 | > th | dose independent | rect. | 5 | 4 |
| 110 | 52.77 | temperature | 30.0 | 10 | < th | dose independent | rect. | 5 | 4 |
| 111 | 52.77 | humidity | 50.0 | 10 | > th | dose independent | rect. | 5 | 4 |
| 113 | 52.77 | atmosphere | 995.0 | 10 | > th | dose independent | rect. | 5 | 4 |
| 114 | 52.77 | atmosphere | 1005.0 | 90 | > th | dose independent | rect. | 5 | 4 |
| 115 | 52.77 | atmosphere | 1015.0 | 10 | < th | dose independent | rect. | 5 | 4 |
| 116 | 52.77 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 7 | 10 |
| 117 | 52.77 | temperature | 10.0 | 10 | > th | dose independent | rect. | 9 | 20 |
| 118 | 52.77 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 7 | 10 |
| 119 | 52.78 | atmosphere | 1005.0 | 10 | > th | dose independent | rect. | 5 | 4 |
| 123 | 52.79 | wind | 9.0 | 10 | < th | dose independent | rect. | 22 | 7 |
| 124 | 52.79 | temperature | 10.0 | 10 | > th | dose independent | rect. | 22 | 7 |
| 125 | 52.79 | temperature | 30.0 | 10 | < th | dose independent | rect. | 22 | 7 |
| 126 | 52.79 | humidity | 50.0 | 10 | > th | dose independent | rect. | 22 | 7 |
| 129 | 52.79 | atmosphere | 995.0 | 10 | > th | dose independent | rect. | 22 | 7 |
| 135 | 52.79 | temperature | 10.0 | 10 | > th | dose independent | rect. | 5 | 17 |
| 137 | 52.79 | atmosphere | 1015.0 | 10 | < th | dose independent | rect. | 5 | 17 |
| 140 | 52.79 | radiation | 30.0 | 10 | < th | dose dependent | rect. | 22 | 7 |
| 162 | 52.84 | temperature | 10.0 | 10 | > th | dose dependent | rect. | 22 | 7 |
| 166 | 52.85 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 17 | 14 |
| 169 | 52.85 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 17 | 14 |
| 192 | 52.88 | precipitation | 0.1 | 10 | < th | dose independent | rect. | 9 | 20 |
| 194 | 52.88 | precipitation | 0.1 | 10 | < th | dose dependent | rect. | 9 | 20 |
| 230 | 52.96 | wind | 9.0 | 10 | < th | dose dependent | rect. | 22 | 7 |
| 233 | 52.97 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 7 | 20 |
| 237 | 52.98 | radiation | 1.0 | 90 | > th | dose dependent | rect. | 4 | 3 |
| 248 | 52.99 | atmosphere | 1010.0 | 270 | < th | dose independent | rect. | 5 | 1 |
| 250 | 53.00 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 5 | 1 |
| 251 | 53.00 | radiation | 40.0 | 30 | < th | dose independent | rect. | 5 | 4 |
| 253 | 53.00 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 5 | 1 |
| 256 | 53.01 | precipitation | 0.1 | 30 | < th | dose independent | rect. | 22 | 7 |
| 259 | 53.01 | precipitation | 0.1 | 30 | < th | dose dependent | rect. | 22 | 7 |
| 271 | 53.03 | temperature | 10.0 | 270 | > th | dose independent | rect. | 5 | 1 |
| 273 | 53.03 | temperature | 30.0 | 270 | < th | dose independent | rect. | 5 | 1 |
| 274 | 53.03 | humidity | 50.0 | 270 | > th | dose independent | rect. | 5 | 1 |
| 278 | 53.03 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 5 | 1 |
| 280 | 53.03 | radiation | 20.0 | 270 | < th | dose independent | rect. | 5 | 1 |
| 286 | 53.03 | temperature | 10.0 | 270 | > th | dose independent | rect. | 6 | 23 |
| 288 | 53.04 | temperature | 15.0 | 270 | > th | dose independent | rect. | 2 | 21 |
| 320 | 53.14 | humidity | 50.0 | 10 | > th | dose dependent | rect. | 22 | 7 |
| 352 | 53.19 | humidity | 50.0 | 90 | > th | dose dependent | rect. | 5 | 4 |
| 361 | 53.21 | radiation | 1.0 | 30 | < th | dose independent | sin | 9 | NA |
| 375 | 53.22 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 3 | 4 |
| 377 | 53.22 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 3 | 4 |
| 380 | 53.24 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 7 | 20 |
| 386 | 53.25 | temperature | 10.0 | 270 | > th | dose independent | rect. | 3 | 4 |
| 388 | 53.25 | temperature | 30.0 | 270 | < th | dose independent | rect. | 3 | 4 |
| 389 | 53.25 | humidity | 50.0 | 270 | > th | dose independent | rect. | 3 | 4 |
| 391 | 53.25 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 3 | 4 |
| 392 | 53.25 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 3 | 4 |
| 394 | 53.25 | radiation | 40.0 | 270 | < th | dose independent | rect. | 3 | 4 |
| 395 | 53.25 | wind | 1.0 | 270 | > th | dose independent | rect. | 7 | 10 |
| 396 | 53.25 | temperature | 10.0 | 270 | > th | dose independent | rect. | 7 | 20 |
| 401 | 53.28 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 7 | 20 |
| 402 | 53.28 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 7 | 20 |
| 418 | 53.38 | atmosphere | 1015.0 | 90 | < th | dose independent | rect. | 7 | 22 |
| 422 | 53.39 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 17 | 14 |
| 425 | 53.40 | precipitation | 0.1 | 90 | < th | dose independent | rect. | 7 | 22 |
| 426 | 53.40 | radiation | 40.0 | 90 | < th | dose dependent | rect. | 5 | 4 |
| 427 | 53.40 | precipitation | 0.1 | 90 | < th | dose dependent | rect. | 7 | 22 |
| 430 | 53.41 | humidity | 50.0 | 10 | > th | dose independent | rect. | 9 | 20 |
| 431 | 53.41 | radiation | 40.0 | 270 | < th | dose dependent | rect. | 5 | 1 |
| 441 | 53.44 | humidity | 50.0 | 270 | > th | dose dependent | rect. | 5 | 1 |
| 526 | 53.57 | wind | 1.0 | 90 | > th | dose independent | rect. | 9 | 20 |
| 527 | 53.57 | wind | 9.0 | 30 | < th | dose independent | rect. | 9 | 20 |
| 530 | 53.58 | radiation | 40.0 | 270 | < th | dose dependent | rect. | 17 | 14 |
| 534 | 53.59 | wind | 9.0 | 270 | < th | dose independent | rect. | 7 | 10 |
| 635 | 53.75 | radiation | 1.0 | 30 | < th | dose dependent | rect. | 22 | 21 |
| 642 | 53.77 | temperature | 10.0 | 10 | > th | dose dependent | rect. | 5 | 17 |
| 645 | 53.78 | atmosphere | 995.0 | 10 | > th | dose independent | rect. | 5 | 17 |
| 670 | 53.84 | radiation | 1.0 | 10 | > th | dose dependent | rect. | 5 | 2 |
| 689 | 53.86 | temperature | 15.0 | 4320 | > th | dose independent | rect. | 7 | 1 |
| 690 | 53.86 | wind | 9.0 | 270 | < th | dose independent | rect. | 7 | 20 |
| 821 | 54.09 | wind | 9.0 | 270 | < th | dose independent | rect. | 3 | 18 |
| 853 | 54.16 | wind | 9.0 | 30 | < th | dose dependent | rect. | 5 | 17 |
| 948 | 54.24 | wind | 1.0 | 90 | > th | dose independent | rect. | 22 | 7 |
| 965 | 54.25 | radiation | 40.0 | 10 | < th | dose dependent | rect. | 5 | 4 |