Os09g0507300
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to L-ascorbate oxidase precursor (EC 1.10.3.3) (Ascorbase) (ASO).
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Os09g0507300 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to L-ascorbate oxidase precursor (EC 1.10.3.3) (Ascorbase) (ASO).
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = atmosphere,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 188.25 | 0.645 | 2.91 | -0.0464 | 0.14 | 0.567 | 0.898 | 1.92 | -0.073 | 15.2 | 1015 | 3833 | -- | -- |
| 197.23 | 0.654 | 2.9 | 0.187 | 0.136 | 0.607 | 1.05 | -- | -0.0104 | 15.3 | 1014 | 4114 | -- | -- |
| 190.63 | 0.643 | 2.92 | -0.0262 | 0.141 | 0.634 | -- | 2.17 | -0.0749 | 15.3 | 1015 | 3801 | -- | -- |
| 201.1 | 0.66 | 2.9 | 0.207 | 0.142 | 0.592 | -- | -- | -0.0114 | 15.3 | 1014 | 4114 | -- | -- |
| 191.64 | 0.645 | 2.91 | -0.0276 | -- | 0.697 | -- | 2.31 | -0.0806 | -- | 1015 | 3794 | -- | -- |
| 207.46 | 0.675 | 2.92 | 0.194 | 0.162 | -- | 1.07 | -- | -0.0858 | 15.6 | -- | -- | -- | -- |
| 210.95 | 0.68 | 2.91 | 0.211 | 0.168 | -- | -- | -- | -0.0797 | 15.6 | -- | -- | -- | -- |
| 202.24 | 0.662 | 2.9 | 0.2 | -- | 0.601 | -- | -- | -0.0134 | -- | 1014 | 4114 | -- | -- |
| 202.22 | 0.662 | 2.9 | -- | 0.137 | 0.594 | -- | -- | -0.0325 | 15.4 | 1014 | 4114 | -- | -- |
| 212.51 | 0.681 | 2.91 | 0.204 | -- | -- | -- | -- | -0.0841 | -- | -- | -- | -- | -- |
| 212.12 | 0.681 | 2.92 | -- | 0.163 | -- | -- | -- | -0.103 | 15.6 | -- | -- | -- | -- |
| 203.29 | 0.664 | 2.9 | -- | -- | 0.603 | -- | -- | -0.0352 | -- | 1014 | 4114 | -- | -- |
| 213.61 | 0.682 | 2.92 | -- | -- | -- | -- | -- | -0.107 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 177.02 | wind | 3.0 | 10 | < th | dose dependent | rect. | 14 | 2 |
| 5 | 179.73 | radiation | 10.0 | 270 | < th | dose independent | rect. | 12 | 1 |
| 6 | 179.77 | radiation | 10.0 | 270 | < th | dose dependent | rect. | 12 | 1 |
| 8 | 181.64 | precipitation | 0.1 | 270 | > th | dose independent | rect. | 13 | 1 |
| 11 | 181.65 | precipitation | 0.1 | 270 | > th | dose dependent | rect. | 13 | 1 |
| 14 | 182.35 | temperature | 25.0 | 10 | < th | dose dependent | rect. | 13 | 4 |
| 15 | 182.45 | temperature | 25.0 | 90 | < th | dose dependent | rect. | 13 | 3 |
| 20 | 182.68 | radiation | 30.0 | 10 | < th | dose dependent | rect. | 13 | 3 |
| 32 | 184.50 | temperature | 25.0 | 90 | < th | dose independent | rect. | 13 | 3 |
| 33 | 184.55 | temperature | 20.0 | 4320 | > th | dose independent | rect. | 23 | 1 |
| 36 | 184.84 | temperature | 20.0 | 4320 | < th | dose independent | rect. | 23 | 1 |
| 38 | 184.89 | atmosphere | 1010.0 | 270 | > th | dose independent | rect. | 12 | 1 |
| 51 | 185.27 | temperature | 20.0 | 4320 | < th | dose independent | rect. | 22 | 3 |
| 66 | 185.68 | temperature | 25.0 | 270 | < th | dose independent | rect. | 12 | 1 |
| 67 | 185.69 | wind | 3.0 | 90 | < th | dose independent | rect. | 13 | 3 |
| 70 | 185.85 | radiation | 20.0 | 10 | < th | dose independent | rect. | 13 | 3 |
| 78 | 186.21 | wind | 3.0 | 10 | < th | dose independent | rect. | 14 | 2 |
| 121 | 187.18 | radiation | 10.0 | 1440 | < th | dose dependent | rect. | 12 | 1 |
| 207 | 188.84 | temperature | 25.0 | 1440 | < th | dose dependent | rect. | 13 | 1 |
| 213 | 188.90 | humidity | 80.0 | 720 | > th | dose independent | rect. | 22 | 13 |
| 217 | 189.00 | temperature | 20.0 | 4320 | > th | dose independent | rect. | 6 | 1 |
| 224 | 189.02 | humidity | 80.0 | 720 | > th | dose independent | rect. | 23 | 11 |
| 236 | 189.20 | atmosphere | 1015.0 | 4320 | > th | dose independent | rect. | 21 | 5 |
| 237 | 189.20 | atmosphere | 1015.0 | 4320 | < th | dose independent | rect. | 20 | 6 |
| 246 | 189.24 | temperature | 20.0 | 4320 | < th | dose independent | rect. | 6 | 1 |
| 268 | 189.35 | wind | 5.0 | 10 | < th | dose dependent | rect. | 12 | 5 |
| 286 | 189.42 | atmosphere | 1015.0 | 4320 | > th | dose independent | rect. | 21 | 2 |
| 296 | 189.47 | atmosphere | 1015.0 | 4320 | < th | dose independent | rect. | 21 | 2 |
| 358 | 189.61 | atmosphere | 1015.0 | 4320 | > th | dose independent | sin | 12 | NA |
| 365 | 189.62 | atmosphere | 1015.0 | 4320 | < th | dose independent | sin | 12 | NA |
| 473 | 189.85 | humidity | 80.0 | 1440 | < th | dose independent | rect. | 22 | 11 |
| 516 | 189.94 | atmosphere | 1015.0 | 4320 | > th | dose dependent | rect. | 23 | 7 |
| 517 | 189.94 | atmosphere | 1015.0 | 4320 | > th | dose dependent | rect. | 21 | 9 |
| 523 | 189.96 | radiation | 10.0 | 1440 | > th | dose independent | rect. | 12 | 1 |
| 606 | 190.08 | humidity | 80.0 | 1440 | < th | dose independent | rect. | 21 | 13 |
| 647 | 190.15 | atmosphere | 1015.0 | 4320 | > th | dose dependent | rect. | 1 | 4 |
| 669 | 190.18 | humidity | 90.0 | 1440 | < th | dose dependent | rect. | 4 | 1 |
| 706 | 190.25 | atmosphere | 1015.0 | 4320 | > th | dose dependent | sin | 12 | NA |
| 755 | 190.31 | humidity | 80.0 | 4320 | < th | dose dependent | rect. | 7 | 1 |
| 784 | 190.35 | atmosphere | 1015.0 | 4320 | > th | dose dependent | rect. | 3 | 1 |
| 810 | 190.39 | atmosphere | 1015.0 | 4320 | > th | dose independent | rect. | 3 | 1 |
| 832 | 190.41 | humidity | 80.0 | 4320 | < th | dose dependent | rect. | 5 | 3 |
| 979 | 190.55 | atmosphere | 1015.0 | 4320 | > th | dose independent | no | NA | NA |
| 998 | 190.57 | atmosphere | 1015.0 | 4320 | > th | dose independent | rect. | 5 | 23 |