Os09g0506200
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Leucine-rich repeat 2 containing protein.
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Os09g0506200 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Leucine-rich repeat 2 containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 158.7 | 0.592 | 4.86 | 0.766 | 0.315 | 1.1 | 0.218 | 0.336 | 0.793 | 6.63 | 20.6 | 1396 | -- | -- |
| 158.89 | 0.587 | 4.86 | 0.713 | 0.318 | 1.1 | 0.324 | -- | 0.779 | 6.41 | 20.72 | 1400 | -- | -- |
| 158.77 | 0.587 | 4.86 | 0.778 | 0.311 | 1.11 | -- | 0.368 | 0.793 | 7.01 | 20.6 | 1360 | -- | -- |
| 158.87 | 0.587 | 4.87 | 0.677 | 0.32 | 1.12 | -- | -- | 0.766 | 6.99 | 20.8 | 1360 | -- | -- |
| 163.9 | 0.596 | 4.87 | 0.787 | -- | 1.12 | -- | 0.385 | 0.8 | -- | 20.67 | 1366 | -- | -- |
| 199.59 | 0.662 | 4.81 | 1.08 | 0.366 | -- | 0.479 | -- | 1.03 | 5.54 | -- | -- | -- | -- |
| 200.1 | 0.662 | 4.81 | 1.08 | 0.371 | -- | -- | -- | 1.03 | 5.84 | -- | -- | -- | -- |
| 164.03 | 0.596 | 4.88 | 0.674 | -- | 1.13 | -- | -- | 0.768 | -- | 20.84 | 1364 | -- | -- |
| 168.93 | 0.605 | 4.9 | -- | 0.321 | 1.42 | -- | -- | 0.644 | 6.74 | 18.58 | 1423 | -- | -- |
| 207.24 | 0.673 | 4.82 | 1.09 | -- | -- | -- | -- | 1.04 | -- | -- | -- | -- | -- |
| 230.72 | 0.711 | 4.84 | -- | 0.388 | -- | -- | -- | 0.908 | 5.71 | -- | -- | -- | -- |
| 174.21 | 0.615 | 4.91 | -- | -- | 1.45 | -- | -- | 0.647 | -- | 18.52 | 1385 | -- | -- |
| 238.54 | 0.721 | 4.85 | -- | -- | -- | -- | -- | 0.915 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 156.03 | temperature | 20 | 1440 | > th | dose dependent | rect. | 13 | 17 |
| 22 | 156.51 | temperature | 20 | 1440 | > th | dose dependent | sin | 15 | NA |
| 86 | 157.38 | radiation | 1 | 43200 | < th | dose independent | rect. | 16 | 1 |
| 91 | 157.41 | radiation | 1 | 43200 | > th | dose independent | rect. | 16 | 1 |
| 125 | 157.68 | temperature | 15 | 1440 | > th | dose dependent | rect. | 16 | 1 |
| 200 | 158.21 | radiation | 1 | 43200 | > th | dose independent | rect. | 14 | 3 |
| 203 | 158.23 | radiation | 1 | 43200 | < th | dose independent | rect. | 14 | 3 |
| 272 | 158.59 | temperature | 10 | 1440 | > th | dose dependent | rect. | 18 | 2 |
| 283 | 158.65 | temperature | 30 | 1440 | < th | dose dependent | rect. | 14 | 9 |
| 293 | 158.68 | temperature | 30 | 1440 | < th | dose dependent | rect. | 16 | 7 |
| 332 | 158.85 | temperature | 20 | 1440 | > th | dose dependent | no | NA | NA |
| 351 | 158.90 | temperature | 30 | 1440 | < th | dose dependent | rect. | 18 | 3 |
| 352 | 158.90 | temperature | 30 | 1440 | < th | dose dependent | rect. | 18 | 5 |
| 355 | 158.90 | temperature | 20 | 1440 | > th | dose dependent | rect. | 1 | 23 |
| 361 | 158.92 | radiation | 1 | 43200 | < th | dose dependent | rect. | 16 | 1 |
| 373 | 158.96 | temperature | 30 | 1440 | < th | dose dependent | rect. | 19 | 1 |
| 382 | 158.98 | temperature | 20 | 1440 | > th | dose dependent | rect. | 18 | 23 |
| 395 | 159.01 | temperature | 20 | 1440 | > th | dose dependent | rect. | 16 | 23 |
| 396 | 159.02 | wind | 5 | 43200 | > th | dose independent | rect. | 20 | 5 |
| 424 | 159.14 | wind | 5 | 43200 | < th | dose independent | rect. | 20 | 5 |
| 474 | 159.32 | radiation | 1 | 43200 | > th | dose independent | rect. | 11 | 6 |
| 491 | 159.36 | radiation | 1 | 43200 | < th | dose independent | rect. | 11 | 6 |
| 525 | 159.47 | temperature | 20 | 1440 | > th | dose dependent | rect. | 5 | 2 |
| 603 | 159.75 | wind | 5 | 43200 | > th | dose independent | rect. | 20 | 19 |
| 618 | 159.84 | temperature | 25 | 1440 | < th | dose independent | rect. | 13 | 10 |
| 638 | 159.94 | temperature | 30 | 1440 | < th | dose dependent | sin | 17 | NA |
| 678 | 160.07 | wind | 5 | 43200 | < th | dose independent | rect. | 20 | 19 |
| 693 | 160.11 | temperature | 25 | 1440 | > th | dose independent | rect. | 12 | 12 |
| 701 | 160.13 | temperature | 10 | 1440 | > th | dose dependent | rect. | 4 | 20 |
| 829 | 160.39 | temperature | 25 | 4320 | < th | dose dependent | rect. | 21 | 9 |
| 836 | 160.41 | temperature | 25 | 4320 | < th | dose dependent | rect. | 22 | 4 |
| 853 | 160.45 | temperature | 30 | 1440 | < th | dose dependent | rect. | 13 | 18 |
| 902 | 160.54 | temperature | 10 | 4320 | > th | dose dependent | rect. | 22 | 1 |
| 931 | 160.60 | wind | 5 | 43200 | < th | dose independent | rect. | 8 | 6 |
| 941 | 160.61 | temperature | 25 | 4320 | < th | dose dependent | rect. | 1 | 1 |
| 955 | 160.63 | wind | 5 | 43200 | > th | dose independent | rect. | 8 | 6 |
| 981 | 160.66 | temperature | 10 | 4320 | > th | dose dependent | rect. | 21 | 9 |
| 999 | 160.69 | temperature | 10 | 4320 | > th | dose dependent | rect. | 4 | 2 |