Os09g0504900
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Hypothetical protein.
FiT-DB / Search/ Help/ Sample detail
|
Os09g0504900 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Hypothetical protein.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 102.58 | 0.476 | 5.75 | 0.538 | 0.394 | 0.927 | 0.704 | -0.532 | 0.342 | 16.7 | 74.99 | 2826 | -- | -- |
| 102.96 | 0.473 | 5.75 | 0.486 | 0.39 | 0.891 | 0.698 | -- | 0.332 | 16.7 | 74.99 | 2824 | -- | -- |
| 103.84 | 0.475 | 5.75 | 0.541 | 0.401 | 0.938 | -- | -0.486 | 0.35 | 16.9 | 75 | 2832 | -- | -- |
| 104.14 | 0.475 | 5.76 | 0.467 | 0.398 | 0.884 | -- | -- | 0.324 | 17.1 | 74.72 | 2822 | -- | -- |
| 111.58 | 0.492 | 5.74 | 0.528 | -- | 1 | -- | -0.409 | 0.333 | -- | 74.8 | 2723 | -- | -- |
| 121.64 | 0.517 | 5.79 | 0.401 | 0.441 | -- | 0.869 | -- | 0.192 | 16.4 | -- | -- | -- | -- |
| 123.6 | 0.521 | 5.78 | 0.408 | 0.451 | -- | -- | -- | 0.197 | 16.7 | -- | -- | -- | -- |
| 111.75 | 0.492 | 5.75 | 0.466 | -- | 0.95 | -- | -- | 0.311 | -- | 74.55 | 2718 | -- | -- |
| 109.87 | 0.488 | 5.77 | -- | 0.395 | 0.85 | -- | -- | 0.267 | 17 | 75 | 2829 | -- | -- |
| 134.36 | 0.542 | 5.78 | 0.391 | -- | -- | -- | -- | 0.185 | -- | -- | -- | -- | -- |
| 127.98 | 0.529 | 5.79 | -- | 0.443 | -- | -- | -- | 0.152 | 16.8 | -- | -- | -- | -- |
| 117.43 | 0.505 | 5.76 | -- | -- | 0.912 | -- | -- | 0.258 | -- | 74.92 | 2745 | -- | -- |
| 138.39 | 0.549 | 5.79 | -- | -- | -- | -- | -- | 0.142 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 98.11 | humidity | 90 | 90 | < th | dose dependent | rect. | 2 | 2 |
| 4 | 98.82 | humidity | 90 | 90 | < th | dose independent | rect. | 3 | 1 |
| 7 | 99.18 | humidity | 80 | 90 | < th | dose independent | rect. | 2 | 3 |
| 13 | 99.24 | humidity | 90 | 10 | < th | dose dependent | rect. | 3 | 1 |
| 15 | 99.42 | humidity | 90 | 10 | < th | dose independent | rect. | 3 | 1 |
| 33 | 102.59 | humidity | 80 | 90 | < th | dose dependent | rect. | 24 | 5 |
| 34 | 102.60 | humidity | 80 | 90 | < th | dose independent | rect. | 24 | 5 |
| 49 | 103.77 | humidity | 80 | 1440 | < th | dose independent | rect. | 6 | 8 |
| 55 | 104.20 | humidity | 80 | 1440 | > th | dose independent | rect. | 6 | 8 |
| 63 | 104.44 | humidity | 70 | 1440 | > th | dose dependent | rect. | 6 | 8 |
| 68 | 104.60 | atmosphere | 1005 | 10 | > th | dose dependent | rect. | 3 | 1 |
| 81 | 104.98 | humidity | 70 | 720 | > th | dose independent | rect. | 15 | 12 |
| 102 | 105.29 | humidity | 60 | 1440 | > th | dose dependent | rect. | 11 | 2 |
| 103 | 105.31 | humidity | 80 | 1440 | < th | dose independent | sin | 3 | NA |
| 107 | 105.32 | humidity | 70 | 720 | > th | dose independent | rect. | 15 | 5 |
| 116 | 105.44 | humidity | 70 | 1440 | > th | dose dependent | rect. | 9 | 5 |
| 117 | 105.44 | humidity | 50 | 1440 | > th | dose dependent | rect. | 4 | 15 |
| 122 | 105.47 | humidity | 50 | 1440 | > th | dose dependent | sin | 2 | NA |
| 138 | 105.57 | humidity | 50 | 1440 | > th | dose dependent | rect. | 4 | 20 |
| 147 | 105.61 | humidity | 80 | 1440 | > th | dose independent | sin | 2 | NA |
| 164 | 105.70 | humidity | 80 | 1440 | > th | dose independent | rect. | 9 | 5 |
| 170 | 105.71 | humidity | 50 | 720 | > th | dose dependent | rect. | 16 | 9 |
| 191 | 105.78 | humidity | 90 | 1440 | < th | dose dependent | rect. | 4 | 15 |
| 192 | 105.78 | humidity | 70 | 4320 | < th | dose dependent | rect. | 16 | 16 |
| 194 | 105.79 | humidity | 80 | 1440 | < th | dose independent | rect. | 9 | 5 |
| 195 | 105.79 | humidity | 70 | 4320 | < th | dose dependent | rect. | 16 | 4 |
| 219 | 105.84 | humidity | 90 | 1440 | < th | dose dependent | sin | 2 | NA |
| 221 | 105.84 | humidity | 90 | 1440 | < th | dose dependent | rect. | 4 | 11 |
| 223 | 105.84 | humidity | 90 | 1440 | < th | dose dependent | rect. | 4 | 20 |
| 273 | 105.94 | humidity | 50 | 1440 | > th | dose dependent | rect. | 22 | 21 |
| 314 | 105.99 | humidity | 60 | 4320 | < th | dose dependent | sin | 12 | NA |
| 338 | 106.03 | humidity | 90 | 1440 | < th | dose dependent | rect. | 16 | 22 |
| 381 | 106.07 | humidity | 90 | 1440 | < th | dose dependent | rect. | 22 | 21 |
| 400 | 106.10 | humidity | 50 | 1440 | > th | dose dependent | rect. | 16 | 22 |
| 401 | 106.11 | humidity | 80 | 1440 | < th | dose independent | rect. | 10 | 3 |
| 487 | 106.22 | humidity | 50 | 1440 | > th | dose dependent | no | NA | NA |
| 514 | 106.28 | humidity | 90 | 1440 | < th | dose dependent | no | NA | NA |
| 526 | 106.30 | humidity | 70 | 720 | > th | dose independent | sin | 14 | NA |
| 533 | 106.30 | humidity | 50 | 1440 | > th | dose dependent | rect. | 9 | 23 |
| 534 | 106.31 | humidity | 70 | 4320 | < th | dose independent | rect. | 18 | 14 |
| 552 | 106.33 | humidity | 80 | 1440 | > th | dose independent | rect. | 10 | 3 |
| 575 | 106.34 | humidity | 80 | 1440 | < th | dose dependent | rect. | 10 | 22 |
| 578 | 106.35 | humidity | 90 | 1440 | < th | dose dependent | rect. | 11 | 2 |
| 719 | 106.52 | humidity | 80 | 1440 | < th | dose independent | rect. | 6 | 15 |
| 746 | 106.55 | humidity | 70 | 4320 | < th | dose independent | rect. | 18 | 2 |
| 771 | 106.56 | humidity | 70 | 1440 | > th | dose independent | rect. | 17 | 20 |
| 831 | 106.61 | humidity | 80 | 1440 | > th | dose independent | rect. | 6 | 16 |
| 873 | 106.66 | humidity | 80 | 1440 | < th | dose dependent | rect. | 10 | 18 |
| 879 | 106.67 | humidity | 80 | 1440 | < th | dose dependent | rect. | 10 | 12 |
| 947 | 106.74 | humidity | 70 | 720 | > th | dose independent | rect. | 15 | 18 |