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Os09g0504800

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Conserved hypothetical protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 9.06 (0.0198) R2 : 0.0263
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.147 (0.0418) R2dN8 : 0.034 R2N8 : 0.0263
σ : 0.374
deviance : 64.07
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = radiation, response mode = > th, dose dependency = dose independent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
51.09 0.336 9.06 -0.121 0.321 -0.405 0.432 0.0733 0.164 16 11.48 28 -- --
51.12 0.333 9.06 -0.119 0.325 -0.41 0.473 -- 0.165 15.9 11.35 27 -- --
51.5 0.334 9.06 -0.117 0.319 -0.413 -- 0.22 0.162 15.9 12.02 25 -- --
51.72 0.335 9.06 -0.118 0.325 -0.414 -- -- 0.166 15.9 12.52 25 -- --
55.73 0.348 9.06 -0.112 -- -0.288 -- 0.264 0.155 -- 13.77 25 -- --
56.87 0.354 9.07 -0.15 0.338 -- 0.14 -- 0.132 20.9 -- -- -- --
56.94 0.353 9.07 -0.155 0.337 -- -- -- 0.132 21 -- -- -- --
55.9 0.348 9.06 -0.139 -- -0.287 -- -- 0.148 -- 12.58 23 -- --
52.08 0.336 9.06 -- 0.328 -0.421 -- -- 0.179 15.8 12.54 25 -- --
63.43 0.372 9.06 -0.155 -- -- -- -- 0.129 -- -- -- -- --
57.57 0.355 9.07 -- 0.337 -- -- -- 0.149 20.9 -- -- -- --
56.41 0.35 9.06 -- -- -0.288 -- -- 0.163 -- 12.57 23 -- --
64.07 0.374 9.06 -- -- -- -- -- 0.147 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 47.50 temperature 20.0 270 > th dose independent rect. 20 16
2 47.69 temperature 20.0 90 > th dose independent rect. 22 15
14 48.76 temperature 20.0 270 > th dose independent rect. 6 20
18 48.92 temperature 10.0 90 > th dose dependent rect. 22 15
24 49.07 temperature 10.0 270 > th dose dependent rect. 20 15
25 49.12 temperature 20.0 270 > th dose independent rect. 7 18
32 49.29 temperature 20.0 270 > th dose independent rect. 19 7
46 49.46 temperature 15.0 10 > th dose dependent rect. 23 14
52 49.51 temperature 30.0 270 < th dose dependent rect. 1 7
71 49.74 temperature 15.0 270 > th dose dependent rect. 20 6
100 50.04 temperature 30.0 90 < th dose dependent rect. 3 7
119 50.21 temperature 20.0 10 > th dose independent rect. 8 19
147 50.45 wind 5.0 30 < th dose independent rect. 14 18
156 50.50 radiation 20.0 270 < th dose dependent rect. 1 7
172 50.61 radiation 10.0 270 < th dose independent rect. 1 7
192 50.70 radiation 20.0 270 < th dose dependent rect. 1 9
204 50.76 radiation 10.0 30 > th dose independent rect. 8 23
207 50.77 radiation 20.0 30 < th dose independent rect. 17 15
209 50.79 radiation 10.0 30 > th dose independent rect. 15 22
213 50.80 temperature 30.0 270 < th dose dependent rect. 3 2
217 50.82 radiation 10.0 270 < th dose independent rect. 1 9
225 50.85 wind 5.0 270 < th dose independent rect. 1 6
233 50.87 wind 1.0 30 > th dose independent rect. 3 5
251 50.93 radiation 10.0 30 > th dose independent sin 1 NA
253 50.93 wind 7.0 270 < th dose independent rect. 12 9
254 50.93 wind 1.0 270 > th dose independent rect. 8 17
267 50.96 radiation 20.0 30 < th dose independent rect. 3 8
272 50.98 radiation 10.0 30 > th dose independent rect. 8 5
300 51.05 radiation 10.0 270 < th dose dependent rect. 1 18
303 51.08 wind 7.0 30 < th dose independent rect. 17 15
310 51.09 atmosphere 1010.0 30 < th dose independent rect. 3 5
314 51.10 atmosphere 1015.0 270 < th dose independent rect. 7 18
316 51.10 radiation 1.0 10 > th dose dependent rect. 8 5
323 51.14 atmosphere 1010.0 270 < th dose independent rect. 1 6
325 51.15 radiation 10.0 30 > th dose independent rect. 8 9
326 51.15 wind 1.0 30 > th dose independent rect. 8 19
329 51.16 radiation 20.0 30 < th dose independent rect. 3 5
331 51.16 atmosphere 995.0 270 > th dose independent rect. 7 18
359 51.23 wind 7.0 270 < th dose independent rect. 14 16
360 51.23 radiation 10.0 30 > th dose independent rect. 11 23
367 51.25 temperature 10.0 270 > th dose independent rect. 1 6
369 51.25 temperature 30.0 270 < th dose independent rect. 1 6
370 51.25 humidity 50.0 270 > th dose independent rect. 1 6
372 51.25 atmosphere 995.0 270 > th dose independent rect. 1 6
376 51.25 temperature 20.0 270 > th dose independent rect. 6 7
378 51.25 temperature 10.0 270 > th dose independent rect. 7 18
380 51.25 precipitation 0.1 270 < th dose independent rect. 7 18
382 51.25 precipitation 0.1 270 < th dose dependent rect. 7 18
384 51.26 precipitation 0.1 270 < th dose independent rect. 1 6
385 51.26 radiation 10.0 30 > th dose independent rect. 6 7
399 51.26 precipitation 0.1 270 < th dose dependent rect. 1 6
424 51.30 wind 5.0 270 < th dose independent rect. 2 4
431 51.31 radiation 30.0 90 < th dose dependent rect. 15 17
434 51.32 radiation 10.0 270 < th dose independent rect. 1 18
443 51.34 wind 9.0 270 < th dose dependent rect. 1 6
449 51.35 radiation 40.0 30 < th dose dependent rect. 17 15
452 51.36 humidity 50.0 270 > th dose independent rect. 21 15
458 51.36 wind 9.0 270 < th dose dependent rect. 12 8
461 51.36 radiation 1.0 10 > th dose dependent rect. 15 22
464 51.37 radiation 10.0 270 < th dose dependent sin 4 NA
490 51.39 wind 1.0 30 > th dose independent rect. 8 9
516 51.41 atmosphere 1015.0 30 < th dose independent rect. 8 19
526 51.42 radiation 10.0 30 > th dose independent rect. 6 11
551 51.43 radiation 40.0 30 < th dose dependent rect. 3 8
553 51.43 wind 9.0 270 < th dose dependent rect. 2 17
564 51.45 wind 7.0 270 < th dose independent rect. 2 17
573 51.46 atmosphere 1015.0 270 < th dose independent rect. 21 15
574 51.46 radiation 30.0 270 < th dose independent rect. 14 16
577 51.46 precipitation 0.1 30 < th dose independent rect. 8 19
580 51.46 precipitation 0.1 30 < th dose dependent rect. 8 19
581 51.47 wind 1.0 270 > th dose independent rect. 3 2
583 51.47 wind 9.0 1440 < th dose independent rect. 4 5
584 51.47 temperature 10.0 1440 > th dose independent rect. 4 5
587 51.47 humidity 50.0 1440 > th dose independent rect. 4 5
589 51.47 atmosphere 995.0 1440 > th dose independent rect. 4 5
590 51.47 atmosphere 1015.0 1440 < th dose independent rect. 4 5
591 51.47 temperature 10.0 1440 > th dose independent rect. 9 19
595 51.47 radiation 10.0 90 < th dose independent rect. 15 19
598 51.47 radiation 20.0 90 < th dose dependent rect. 15 19
600 51.48 wind 9.0 270 < th dose independent rect. 21 15
602 51.48 radiation 20.0 30 < th dose independent rect. 17 17
606 51.49 wind 5.0 30 < th dose independent rect. 3 5
609 51.49 radiation 10.0 30 < th dose independent rect. 3 20
621 51.50 temperature 10.0 10 > th dose dependent rect. 8 19
622 51.50 radiation 40.0 30 < th dose dependent rect. 9 23
632 51.52 temperature 20.0 30 > th dose independent rect. 8 9
639 51.52 temperature 15.0 10 > th dose dependent rect. 23 4
642 51.53 wind 1.0 270 > th dose independent rect. 1 6
644 51.53 temperature 10.0 270 > th dose independent rect. 12 9
645 51.53 temperature 10.0 270 > th dose independent rect. 21 15
646 51.53 atmosphere 995.0 270 > th dose independent rect. 21 15
664 51.55 wind 9.0 270 < th dose independent rect. 7 18
673 51.57 radiation 10.0 30 > th dose independent no NA NA
767 51.58 precipitation 0.1 270 < th dose independent rect. 21 15
774 51.58 precipitation 0.1 270 < th dose dependent rect. 21 15
777 51.59 precipitation 0.1 30 < th dose independent rect. 3 5
778 51.59 temperature 10.0 30 > th dose independent rect. 8 9
781 51.59 atmosphere 1015.0 30 < th dose independent rect. 8 9
782 51.59 precipitation 0.1 30 < th dose independent rect. 8 9
783 51.59 temperature 10.0 30 > th dose independent rect. 17 15
788 51.59 atmosphere 995.0 270 > th dose independent rect. 6 20
789 51.59 wind 9.0 270 < th dose dependent rect. 2 4
791 51.59 precipitation 0.1 30 < th dose dependent rect. 3 5
792 51.59 precipitation 0.1 30 < th dose dependent rect. 8 9
795 51.60 temperature 10.0 30 > th dose independent rect. 3 5
797 51.60 temperature 30.0 30 < th dose independent rect. 3 5
798 51.60 humidity 50.0 30 > th dose independent rect. 3 5
800 51.60 atmosphere 995.0 30 > th dose independent rect. 3 5
807 51.60 temperature 10.0 30 > th dose independent rect. 8 19
808 51.60 atmosphere 995.0 30 > th dose independent rect. 8 19
809 51.60 radiation 40.0 10 < th dose independent rect. 3 19
812 51.60 radiation 10.0 90 < th dose independent rect. 1 22
818 51.61 radiation 40.0 30 < th dose independent rect. 17 15
819 51.61 humidity 50.0 270 > th dose independent rect. 14 16
834 51.62 radiation 40.0 30 < th dose independent rect. 3 5
840 51.62 atmosphere 995.0 30 > th dose independent rect. 8 9
860 51.63 radiation 40.0 270 < th dose independent rect. 11 20
863 51.63 temperature 10.0 10 > th dose dependent rect. 8 5
868 51.64 humidity 50.0 270 > th dose independent rect. 12 8
874 51.65 wind 1.0 270 > th dose independent rect. 2 4
896 51.66 wind 9.0 30 < th dose independent rect. 8 9
897 51.66 humidity 50.0 10 > th dose independent rect. 17 15
899 51.66 radiation 10.0 30 < th dose independent rect. 5 17
945 51.68 radiation 40.0 30 < th dose dependent rect. 12 20
960 51.70 temperature 10.0 270 > th dose independent rect. 2 4
962 51.70 temperature 30.0 270 < th dose independent rect. 2 4
963 51.70 humidity 50.0 270 > th dose independent rect. 2 4
966 51.70 atmosphere 995.0 270 > th dose independent rect. 2 4
971 51.70 precipitation 0.1 270 < th dose independent rect. 2 4
977 51.70 temperature 10.0 270 > th dose independent rect. 6 20
980 51.70 precipitation 0.1 270 < th dose independent rect. 6 20
981 51.70 precipitation 0.1 270 < th dose dependent rect. 2 4
987 51.70 precipitation 0.1 270 < th dose dependent rect. 6 20
988 51.71 wind 1.0 270 > th dose independent rect. 8 1
989 51.71 temperature 20.0 10 > th dose independent rect. 23 4