Os09g0502200
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Beta-1,3-glucanase (Fragment).
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Os09g0502200 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Beta-1,3-glucanase (Fragment).
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = atmosphere,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 96.83 | 0.462 | 7.5 | 0.636 | 0.603 | 1.06 | 1.17 | 1.92 | 0.283 | 23.8 | 1009 | 16150 | -- | -- |
| 100.74 | 0.467 | 7.52 | 0.469 | 0.611 | 1.2 | 1.17 | -- | 0.292 | 23.8 | 1008 | 16282 | -- | -- |
| 102.52 | 0.472 | 7.5 | 0.619 | 0.603 | 1.05 | -- | 2.03 | 0.271 | 23.3 | 1009 | 15896 | -- | -- |
| 106.41 | 0.48 | 7.52 | 0.407 | 0.613 | 1.24 | -- | -- | 0.284 | 23.4 | 1008 | 16146 | -- | -- |
| 124.89 | 0.52 | 7.5 | 0.669 | -- | 1.01 | -- | 2.21 | 0.236 | -- | 1009 | 15464 | -- | -- |
| 128.83 | 0.532 | 7.54 | 0.629 | 0.599 | -- | 1.22 | -- | 0.18 | 23.8 | -- | -- | -- | -- |
| 135.04 | 0.544 | 7.55 | 0.582 | 0.599 | -- | -- | -- | 0.177 | 23.4 | -- | -- | -- | -- |
| 129.76 | 0.531 | 7.51 | 0.419 | -- | 1.26 | -- | -- | 0.267 | -- | 1009 | 16286 | -- | -- |
| 110.21 | 0.489 | 7.54 | -- | 0.607 | 1.37 | -- | -- | 0.236 | 23.3 | 1009 | 15650 | -- | -- |
| 157.54 | 0.586 | 7.53 | 0.598 | -- | -- | -- | -- | 0.183 | -- | -- | -- | -- | -- |
| 143.98 | 0.561 | 7.56 | -- | 0.605 | -- | -- | -- | 0.112 | 23.4 | -- | -- | -- | -- |
| 133.3 | 0.538 | 7.53 | -- | -- | 1.36 | -- | -- | 0.186 | -- | 1009 | 15396 | -- | -- |
| 166.97 | 0.603 | 7.55 | -- | -- | -- | -- | -- | 0.116 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 96.44 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 17 | 1 |
| 2 | 96.63 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 17 | 1 |
| 3 | 96.63 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 17 | 1 |
| 4 | 96.78 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 17 | 1 |
| 5 | 97.27 | atmosphere | 1010.0 | 14400 | < th | dose dependent | rect. | 15 | 1 |
| 8 | 97.38 | atmosphere | 1010.0 | 14400 | < th | dose dependent | rect. | 6 | 1 |
| 10 | 97.44 | atmosphere | 1010.0 | 14400 | < th | dose dependent | rect. | 24 | 1 |
| 20 | 97.63 | atmosphere | 1010.0 | 14400 | < th | dose dependent | rect. | 24 | 8 |
| 30 | 97.68 | atmosphere | 1010.0 | 14400 | < th | dose dependent | rect. | 24 | 18 |
| 38 | 97.70 | atmosphere | 1010.0 | 14400 | < th | dose dependent | rect. | 14 | 18 |
| 75 | 97.75 | atmosphere | 1010.0 | 14400 | < th | dose dependent | rect. | 4 | 14 |
| 169 | 97.83 | atmosphere | 1010.0 | 14400 | < th | dose dependent | sin | 9 | NA |
| 170 | 97.83 | atmosphere | 1010.0 | 14400 | < th | dose dependent | no | NA | NA |
| 173 | 97.83 | atmosphere | 1010.0 | 14400 | < th | dose dependent | rect. | 4 | 22 |
| 181 | 97.84 | atmosphere | 1010.0 | 14400 | < th | dose dependent | sin | 7 | NA |
| 184 | 97.84 | atmosphere | 1010.0 | 14400 | < th | dose dependent | sin | 4 | NA |
| 201 | 97.85 | atmosphere | 1010.0 | 14400 | < th | dose dependent | sin | 2 | NA |
| 465 | 98.07 | atmosphere | 995.0 | 14400 | > th | dose dependent | rect. | 14 | 1 |
| 560 | 98.49 | atmosphere | 1005.0 | 14400 | > th | dose independent | rect. | 6 | 10 |
| 590 | 98.64 | atmosphere | 1005.0 | 14400 | < th | dose independent | rect. | 6 | 11 |
| 685 | 98.99 | atmosphere | 995.0 | 14400 | > th | dose dependent | rect. | 24 | 1 |
| 725 | 99.05 | atmosphere | 1005.0 | 14400 | > th | dose independent | rect. | 9 | 1 |
| 726 | 99.05 | atmosphere | 995.0 | 14400 | > th | dose independent | rect. | 10 | 5 |
| 746 | 99.07 | atmosphere | 1005.0 | 14400 | > th | dose independent | sin | 1 | NA |
| 758 | 99.09 | atmosphere | 995.0 | 14400 | > th | dose independent | rect. | 8 | 7 |
| 767 | 99.10 | atmosphere | 1005.0 | 14400 | < th | dose independent | sin | 0 | NA |
| 783 | 99.11 | atmosphere | 1005.0 | 14400 | < th | dose independent | rect. | 8 | 1 |
| 850 | 99.15 | atmosphere | 1005.0 | 14400 | > th | dose independent | rect. | 5 | 17 |
| 857 | 99.15 | atmosphere | 995.0 | 14400 | > th | dose dependent | rect. | 6 | 12 |
| 884 | 99.16 | atmosphere | 995.0 | 14400 | > th | dose dependent | rect. | 24 | 18 |
| 908 | 99.17 | atmosphere | 995.0 | 14400 | > th | dose dependent | rect. | 12 | 14 |
| 945 | 99.18 | atmosphere | 995.0 | 14400 | > th | dose dependent | rect. | 12 | 19 |