Os09g0499600
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Zinc finger, BED-type predicted domain containing protein.
FiT-DB / Search/ Help/ Sample detail
|
Os09g0499600 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Zinc finger, BED-type predicted domain containing protein.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 60.46 | 0.365 | 8.58 | 0.715 | 0.9 | 1.09 | 0.825 | -0.361 | -0.0609 | 12.6 | 25.7 | 249 | -- | -- |
| 60.5 | 0.362 | 8.57 | 0.758 | 0.902 | 1.07 | 0.806 | -- | -0.0545 | 12.6 | 25.7 | 248 | -- | -- |
| 63.17 | 0.37 | 8.57 | 0.814 | 0.885 | 1.07 | -- | 0.249 | -0.049 | 12.6 | 25.7 | 228 | -- | -- |
| 63.2 | 0.37 | 8.57 | 0.785 | 0.886 | 1.08 | -- | -- | -0.0482 | 12.6 | 25.7 | 229 | -- | -- |
| 91.22 | 0.447 | 8.62 | 0.651 | -- | 1.79 | -- | -0.141 | -0.182 | -- | 24.59 | 9 | -- | -- |
| 78.72 | 0.416 | 8.57 | 0.923 | 1.18 | -- | 0.993 | -- | -0.00183 | 13.9 | -- | -- | -- | -- |
| 82.52 | 0.425 | 8.57 | 0.954 | 1.18 | -- | -- | -- | 0.00401 | 13.9 | -- | -- | -- | -- |
| 90.32 | 0.443 | 8.61 | 0.657 | -- | 1.76 | -- | -- | -0.18 | -- | 24.6 | 11 | -- | -- |
| 78.69 | 0.413 | 8.6 | -- | 0.814 | 1.27 | -- | -- | -0.167 | 12.3 | 25.17 | 206 | -- | -- |
| 166.38 | 0.603 | 8.58 | 0.905 | -- | -- | -- | -- | -0.0234 | -- | -- | -- | -- | -- |
| 106.5 | 0.483 | 8.59 | -- | 1.16 | -- | -- | -- | -0.102 | 13.9 | -- | -- | -- | -- |
| 101.28 | 0.469 | 8.63 | -- | -- | 1.86 | -- | -- | -0.267 | -- | 24.48 | 13 | -- | -- |
| 187.99 | 0.64 | 8.6 | -- | -- | -- | -- | -- | -0.124 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 45.15 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 3 | 14 |
| 9 | 49.57 | temperature | 30.0 | 270 | < th | dose dependent | rect. | 7 | 7 |
| 24 | 51.37 | temperature | 15.0 | 10 | > th | dose dependent | rect. | 5 | 15 |
| 26 | 51.39 | temperature | 10.0 | 720 | > th | dose dependent | rect. | 3 | 6 |
| 37 | 51.89 | temperature | 30.0 | 270 | < th | dose independent | rect. | 6 | 21 |
| 54 | 52.59 | temperature | 30.0 | 270 | < th | dose independent | rect. | 7 | 8 |
| 58 | 52.73 | temperature | 30.0 | 90 | < th | dose independent | rect. | 9 | 19 |
| 61 | 52.94 | temperature | 30.0 | 270 | < th | dose dependent | rect. | 9 | 1 |
| 73 | 53.24 | temperature | 30.0 | 720 | < th | dose dependent | rect. | 24 | 11 |
| 96 | 53.82 | temperature | 10.0 | 720 | > th | dose dependent | rect. | 21 | 18 |
| 97 | 53.83 | temperature | 30.0 | 10 | < th | dose independent | rect. | 9 | 20 |
| 138 | 54.40 | temperature | 15.0 | 720 | > th | dose dependent | sin | 5 | NA |
| 178 | 54.82 | temperature | 30.0 | 90 | < th | dose independent | rect. | 9 | 6 |
| 222 | 55.25 | temperature | 25.0 | 270 | < th | dose independent | rect. | 8 | 3 |
| 230 | 55.29 | temperature | 30.0 | 720 | < th | dose dependent | sin | 5 | NA |
| 234 | 55.31 | temperature | 30.0 | 10 | < th | dose independent | rect. | 9 | 7 |
| 357 | 56.44 | temperature | 30.0 | 10 | < th | dose independent | rect. | 9 | 5 |
| 366 | 56.49 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 1 | 22 |
| 452 | 57.10 | temperature | 30.0 | 270 | < th | dose independent | rect. | 17 | 10 |
| 471 | 57.23 | temperature | 20.0 | 270 | > th | dose dependent | sin | 0 | NA |
| 523 | 57.50 | temperature | 30.0 | 270 | < th | dose independent | rect. | 17 | 22 |
| 528 | 57.53 | humidity | 60.0 | 270 | > th | dose independent | rect. | 17 | 10 |
| 558 | 57.69 | temperature | 20.0 | 720 | > th | dose independent | rect. | 4 | 3 |
| 563 | 57.70 | temperature | 30.0 | 270 | < th | dose dependent | rect. | 7 | 19 |
| 606 | 57.92 | radiation | 10.0 | 270 | < th | dose independent | rect. | 17 | 10 |
| 631 | 58.04 | radiation | 10.0 | 270 | < th | dose dependent | rect. | 16 | 11 |
| 667 | 58.20 | temperature | 10.0 | 720 | > th | dose dependent | rect. | 21 | 12 |
| 722 | 58.48 | humidity | 70.0 | 270 | > th | dose independent | rect. | 7 | 20 |
| 793 | 58.80 | temperature | 30.0 | 270 | < th | dose independent | rect. | 7 | 14 |
| 838 | 58.98 | wind | 9.0 | 270 | < th | dose independent | rect. | 3 | 14 |
| 917 | 59.29 | humidity | 80.0 | 270 | > th | dose dependent | rect. | 3 | 3 |
| 937 | 59.35 | temperature | 30.0 | 90 | < th | dose dependent | rect. | 9 | 19 |
| 958 | 59.45 | temperature | 20.0 | 270 | > th | dose independent | rect. | 3 | 15 |
| 965 | 59.46 | atmosphere | 995.0 | 10 | > th | dose dependent | rect. | 9 | 20 |
| 966 | 59.47 | wind | 9.0 | 270 | < th | dose independent | rect. | 17 | 10 |
| 983 | 59.54 | temperature | 10.0 | 270 | > th | dose independent | rect. | 17 | 10 |
| 987 | 59.54 | temperature | 10.0 | 270 | > th | dose independent | rect. | 3 | 14 |
| 988 | 59.54 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 3 | 14 |
| 991 | 59.55 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 3 | 14 |
| 993 | 59.55 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 3 | 14 |
| 997 | 59.58 | temperature | 30.0 | 270 | < th | dose dependent | sin | 23 | NA |