Os09g0497900
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : No apical meristem (NAM) protein domain containing protein.
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Os09g0497900 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : No apical meristem (NAM) protein domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 161.42 | 0.597 | 5.95 | 0.383 | 0.466 | -0.82 | -0.64 | -1.69 | -0.18 | 10.3 | 22.5 | 1847 | -- | -- |
| 168.65 | 0.605 | 6.02 | -0.151 | 0.4 | -0.814 | -0.927 | -- | -0.311 | 9.82 | 22.5 | 1870 | -- | -- |
| 162.72 | 0.594 | 5.96 | 0.348 | 0.465 | -0.812 | -- | -1.66 | -0.184 | 10.8 | 22.42 | 1894 | -- | -- |
| 169.83 | 0.607 | 6.01 | -0.202 | 0.477 | -0.829 | -- | -- | -0.319 | 10.8 | 22.58 | 1869 | -- | -- |
| 175.95 | 0.618 | 5.96 | 0.367 | -- | -0.817 | -- | -1.74 | -0.172 | -- | 22.36 | 1699 | -- | -- |
| 195.12 | 0.655 | 5.95 | 0.111 | 0.445 | -- | -0.683 | -- | -0.0317 | 10.1 | -- | -- | -- | -- |
| 196.59 | 0.657 | 5.95 | 0.0874 | 0.45 | -- | -- | -- | -0.031 | 10.9 | -- | -- | -- | -- |
| 182.7 | 0.63 | 6.02 | -0.135 | -- | -0.772 | -- | -- | -0.27 | -- | 24.5 | 1551 | -- | -- |
| 170.13 | 0.607 | 6.01 | -- | 0.498 | -0.771 | -- | -- | -0.286 | 11.2 | 22.56 | 1328 | -- | -- |
| 209.16 | 0.676 | 5.96 | 0.0779 | -- | -- | -- | -- | -0.034 | -- | -- | -- | -- | -- |
| 196.79 | 0.656 | 5.95 | -- | 0.45 | -- | -- | -- | -0.0407 | 10.8 | -- | -- | -- | -- |
| 183.24 | 0.63 | 6.04 | -- | -- | -0.826 | -- | -- | -0.299 | -- | 24.5 | 1607 | -- | -- |
| 209.32 | 0.675 | 5.96 | -- | -- | -- | -- | -- | -0.0426 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 155.13 | temperature | 10 | 10 | > th | dose dependent | rect. | 3 | 23 |
| 9 | 161.27 | temperature | 20 | 4320 | > th | dose independent | rect. | 20 | 4 |
| 15 | 161.52 | temperature | 20 | 4320 | > th | dose independent | rect. | 21 | 2 |
| 17 | 161.68 | temperature | 20 | 4320 | < th | dose independent | rect. | 20 | 4 |
| 20 | 162.03 | temperature | 30 | 90 | < th | dose dependent | rect. | 23 | 23 |
| 21 | 162.09 | temperature | 30 | 10 | < th | dose dependent | rect. | 7 | 23 |
| 25 | 162.27 | temperature | 25 | 1440 | < th | dose dependent | rect. | 16 | 5 |
| 26 | 162.43 | temperature | 30 | 30 | < th | dose dependent | rect. | 9 | 23 |
| 28 | 162.47 | temperature | 25 | 1440 | < th | dose dependent | rect. | 17 | 3 |
| 32 | 162.53 | temperature | 15 | 720 | > th | dose dependent | rect. | 20 | 19 |
| 36 | 162.74 | temperature | 25 | 1440 | < th | dose dependent | rect. | 18 | 1 |
| 37 | 162.75 | temperature | 20 | 4320 | < th | dose independent | rect. | 21 | 2 |
| 52 | 163.05 | temperature | 30 | 10 | < th | dose dependent | rect. | 15 | 23 |
| 61 | 163.20 | temperature | 30 | 10 | < th | dose dependent | rect. | 11 | 23 |
| 62 | 163.22 | temperature | 30 | 10 | < th | dose dependent | no | NA | NA |
| 63 | 163.23 | temperature | 30 | 10 | < th | dose dependent | rect. | 1 | 23 |
| 69 | 163.29 | temperature | 15 | 10 | > th | dose dependent | no | NA | NA |
| 90 | 163.44 | temperature | 25 | 1440 | < th | dose dependent | sin | 16 | NA |
| 93 | 163.47 | temperature | 30 | 10 | < th | dose dependent | rect. | 17 | 23 |
| 109 | 163.57 | temperature | 25 | 1440 | < th | dose dependent | rect. | 14 | 14 |
| 143 | 163.71 | temperature | 25 | 1440 | < th | dose dependent | rect. | 11 | 18 |
| 151 | 163.77 | temperature | 20 | 10 | > th | dose dependent | rect. | 6 | 23 |
| 169 | 163.86 | temperature | 25 | 4320 | < th | dose dependent | rect. | 21 | 1 |
| 179 | 163.95 | temperature | 30 | 10 | < th | dose dependent | rect. | 23 | 23 |
| 181 | 163.97 | temperature | 20 | 1440 | > th | dose dependent | rect. | 3 | 1 |
| 223 | 164.15 | temperature | 20 | 10 | > th | dose dependent | rect. | 21 | 23 |
| 233 | 164.23 | temperature | 30 | 10 | < th | dose dependent | rect. | 19 | 23 |
| 296 | 164.56 | temperature | 20 | 10 | > th | dose dependent | rect. | 6 | 20 |
| 315 | 164.63 | temperature | 20 | 90 | > th | dose dependent | rect. | 12 | 23 |
| 327 | 164.68 | temperature | 20 | 10 | > th | dose dependent | rect. | 1 | 23 |
| 348 | 164.79 | temperature | 25 | 1440 | < th | dose dependent | rect. | 1 | 22 |
| 349 | 164.79 | temperature | 25 | 1440 | < th | dose dependent | rect. | 13 | 23 |
| 368 | 164.88 | temperature | 10 | 720 | > th | dose dependent | rect. | 20 | 13 |
| 386 | 164.94 | temperature | 20 | 10 | > th | dose dependent | rect. | 13 | 23 |
| 387 | 164.95 | temperature | 25 | 1440 | < th | dose dependent | no | NA | NA |
| 409 | 165.00 | temperature | 20 | 10 | > th | dose dependent | rect. | 6 | 18 |
| 417 | 165.02 | temperature | 30 | 30 | < th | dose dependent | rect. | 21 | 23 |
| 450 | 165.13 | temperature | 20 | 4320 | < th | dose independent | sin | 16 | NA |
| 459 | 165.16 | temperature | 20 | 4320 | > th | dose independent | sin | 16 | NA |
| 485 | 165.26 | temperature | 30 | 4320 | < th | dose dependent | rect. | 3 | 1 |
| 506 | 165.33 | temperature | 20 | 10 | > th | dose dependent | rect. | 23 | 23 |
| 534 | 165.41 | temperature | 15 | 270 | > th | dose dependent | rect. | 16 | 23 |
| 540 | 165.44 | temperature | 10 | 4320 | > th | dose dependent | rect. | 3 | 1 |
| 601 | 165.60 | temperature | 30 | 10 | < th | dose dependent | rect. | 5 | 23 |
| 603 | 165.61 | temperature | 10 | 4320 | > th | dose dependent | rect. | 21 | 7 |
| 688 | 165.83 | temperature | 10 | 4320 | > th | dose dependent | rect. | 1 | 3 |
| 689 | 165.83 | temperature | 10 | 4320 | > th | dose dependent | rect. | 23 | 5 |
| 690 | 165.83 | temperature | 30 | 4320 | < th | dose dependent | rect. | 23 | 5 |
| 728 | 165.91 | temperature | 10 | 720 | > th | dose dependent | rect. | 21 | 11 |
| 846 | 166.11 | temperature | 10 | 4320 | > th | dose dependent | rect. | 21 | 1 |
| 893 | 166.17 | temperature | 10 | 4320 | > th | dose dependent | rect. | 23 | 1 |