Os09g0493800
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Chaperone protein dnaJ 10 (AtJ10) (AtDjC10).
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Os09g0493800 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Chaperone protein dnaJ 10 (AtJ10) (AtDjC10).
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 20.88 | 0.215 | 9.96 | 0.123 | 0.598 | -0.799 | -0.302 | 0.643 | 0.374 | 3.36 | 23.09 | 264 | -- | -- |
| 21.12 | 0.214 | 9.94 | 0.166 | 0.601 | -0.98 | -0.163 | -- | 0.389 | 3.46 | 22.25 | 259 | -- | -- |
| 21.03 | 0.214 | 9.95 | 0.147 | 0.597 | -0.934 | -- | 0.416 | 0.387 | 3.42 | 22.27 | 297 | -- | -- |
| 21.15 | 0.214 | 9.94 | 0.188 | 0.6 | -1.01 | -- | -- | 0.403 | 3.41 | 22.09 | 267 | -- | -- |
| 35.27 | 0.277 | 9.98 | -0.0825 | -- | -0.714 | -- | 1.26 | 0.299 | -- | 25.6 | 1041 | -- | -- |
| 30.86 | 0.26 | 9.92 | 0.404 | 0.521 | -- | -0.123 | -- | 0.513 | 3.37 | -- | -- | -- | -- |
| 30.91 | 0.26 | 9.92 | 0.406 | 0.52 | -- | -- | -- | 0.514 | 3.39 | -- | -- | -- | -- |
| 36.16 | 0.28 | 9.95 | 0.169 | -- | -0.945 | -- | -- | 0.388 | -- | 22.44 | 1080 | -- | -- |
| 21.95 | 0.218 | 9.95 | -- | 0.604 | -1.16 | -- | -- | 0.371 | 3.49 | 21.87 | 303 | -- | -- |
| 46.13 | 0.317 | 9.92 | 0.428 | -- | -- | -- | -- | 0.527 | -- | -- | -- | -- | -- |
| 35.25 | 0.278 | 9.93 | -- | 0.528 | -- | -- | -- | 0.469 | 3.39 | -- | -- | -- | -- |
| 36.43 | 0.281 | 9.95 | -- | -- | -1.09 | -- | -- | 0.387 | -- | 19.32 | 2421 | -- | -- |
| 50.96 | 0.333 | 9.93 | -- | -- | -- | -- | -- | 0.48 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 20.99 | temperature | 25.0 | 90 | < th | dose dependent | rect. | 17 | 20 |
| 28 | 21.36 | temperature | 25.0 | 90 | < th | dose dependent | rect. | 21 | 23 |
| 44 | 21.49 | temperature | 25.0 | 90 | < th | dose dependent | rect. | 5 | 23 |
| 54 | 21.53 | temperature | 25.0 | 90 | < th | dose dependent | no | NA | NA |
| 67 | 21.54 | temperature | 25.0 | 90 | < th | dose dependent | rect. | 1 | 23 |
| 151 | 21.63 | temperature | 20.0 | 90 | < th | dose dependent | rect. | 21 | 15 |
| 162 | 21.63 | temperature | 20.0 | 270 | < th | dose dependent | rect. | 8 | 23 |
| 238 | 21.71 | temperature | 20.0 | 30 | < th | dose dependent | rect. | 3 | 23 |
| 245 | 21.71 | temperature | 20.0 | 30 | < th | dose dependent | rect. | 11 | 23 |
| 376 | 21.85 | temperature | 25.0 | 720 | < th | dose dependent | rect. | 8 | 19 |
| 441 | 21.92 | humidity | 80.0 | 43200 | < th | dose dependent | rect. | 6 | 1 |
| 549 | 22.09 | temperature | 20.0 | 270 | < th | dose dependent | sin | 8 | NA |
| 557 | 22.10 | humidity | 80.0 | 43200 | < th | dose independent | rect. | 6 | 1 |
| 626 | 22.20 | temperature | 20.0 | 30 | < th | dose dependent | sin | 6 | NA |
| 633 | 22.21 | humidity | 50.0 | 43200 | < th | dose dependent | sin | 8 | NA |
| 654 | 22.25 | humidity | 80.0 | 43200 | > th | dose independent | rect. | 6 | 1 |
| 719 | 22.38 | humidity | 60.0 | 43200 | < th | dose dependent | rect. | 5 | 5 |
| 739 | 22.42 | temperature | 15.0 | 4320 | < th | dose dependent | rect. | 24 | 3 |
| 746 | 22.43 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 7 | 1 |
| 747 | 22.43 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 7 | 1 |
| 749 | 22.43 | humidity | 50.0 | 43200 | < th | dose dependent | rect. | 4 | 11 |
| 760 | 22.43 | temperature | 15.0 | 4320 | < th | dose dependent | rect. | 23 | 20 |
| 775 | 22.44 | temperature | 15.0 | 4320 | < th | dose dependent | rect. | 20 | 21 |
| 778 | 22.45 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 7 | 1 |
| 779 | 22.45 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 7 | 1 |
| 812 | 22.47 | temperature | 15.0 | 4320 | < th | dose dependent | rect. | 20 | 9 |
| 845 | 22.49 | temperature | 15.0 | 4320 | < th | dose dependent | sin | 10 | NA |
| 848 | 22.49 | temperature | 15.0 | 4320 | < th | dose dependent | rect. | 21 | 7 |
| 855 | 22.49 | temperature | 15.0 | 4320 | < th | dose dependent | rect. | 20 | 14 |
| 977 | 22.55 | temperature | 20.0 | 1440 | < th | dose dependent | rect. | 4 | 11 |
| 982 | 22.55 | temperature | 15.0 | 4320 | < th | dose dependent | rect. | 16 | 15 |