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Os09g0493000

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Conserved hypothetical protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 6.78 (0.0483) R2 : 0.426
β1 : 1.67 (0.176) R2dD : 0.118 R2D : 0.033
β2 : 2.49 (0.196) R2dC : 0.598 R2C : -0.28
β3 : -2.66 (0.237) R2dE : 0.462 R2E : -0.392
β4 : 2.64 (0.441) R2dD*C : 0.046 R2D*C : 0.0121
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.884 (0.103) R2dN8 : 0.127 R2N8 : 0.0851
σ : 0.895
deviance : 369.35
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_____
C
peak time of C : 22.8
E
wheather : atmosphere
threshold : 1023
memory length : 55
response mode : < th
dose dependency : dose dependent
G
type of G : rect.
peak or start time of G : 18.4
open length of G : 10.8

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Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = atmosphere, response mode = < th, dose dependency = dose dependent, type of G = rect.)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
368.83 0.902 6.78 1.66 2.48 -2.68 2.06 0.938 0.886 22.7 1023 59 18.3 10.8
369.35 0.895 6.78 1.67 2.49 -2.66 2.64 -- 0.884 22.8 1023 55 18.4 10.8
373.81 0.9 6.78 1.62 2.48 -2.63 -- 3.07 0.9 22.6 1024 57 18.4 10.8
398.15 0.929 6.78 1.57 2.45 -2.5 -- -- 0.908 22.6 1025 55 18.4 10.8
439.18 0.976 6.75 1.52 -- -1.79 -- -2.06 0.856 -- 1028 1070 18 8.8
448.27 0.993 6.72 1.56 1.1 -- 2.06 -- 1.01 20.3 -- -- -- --
458.06 1 6.72 1.51 1.14 -- -- -- 1.02 19.5 -- -- -- --
437.58 0.974 6.72 1.58 -- -1.86 -- -- 0.877 -- 1034 1058 18 8.68
462.04 1 6.82 -- 2.45 -2.31 -- -- 0.782 22.6 1029 56 18.4 10.8
527.92 1.07 6.69 1.49 -- -- -- -- 1 -- -- -- -- --
518.32 1.06 6.76 -- 1.13 -- -- -- 0.853 19.6 -- -- -- --
502.38 1.04 6.74 -- -- -1.65 -- -- 0.811 -- 1046 1013 18.1 8.13
586.84 1.13 6.73 -- -- -- -- -- 0.837 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 378.75 atmosphere 1015.0 90 < th dose dependent rect. 18 11
7 386.86 atmosphere 1015.0 90 < th dose independent rect. 18 11
8 387.93 wind 7.0 90 < th dose independent rect. 18 11
9 388.05 precipitation 0.1 90 < th dose independent rect. 18 11
10 388.05 precipitation 0.1 90 < th dose dependent rect. 18 11
13 389.82 temperature 10.0 90 > th dose independent rect. 18 11
14 389.82 humidity 50.0 90 > th dose independent rect. 18 11
15 389.82 radiation 20.0 90 < th dose independent rect. 18 11
18 389.82 temperature 10.0 90 > th dose independent rect. 5 13
19 389.82 atmosphere 1015.0 90 < th dose independent rect. 5 13
20 390.04 radiation 40.0 90 < th dose dependent rect. 18 11
21 390.05 atmosphere 995.0 90 > th dose independent rect. 18 11
38 394.08 wind 9.0 90 < th dose independent rect. 5 13
41 394.47 precipitation 0.1 90 < th dose independent rect. 5 13
42 394.47 precipitation 0.1 90 < th dose dependent rect. 5 13
53 394.79 wind 1.0 90 > th dose independent rect. 4 14
67 395.40 atmosphere 1015.0 10 < th dose dependent rect. 19 20
74 395.74 wind 7.0 10 < th dose independent rect. 19 10
88 396.44 temperature 10.0 1440 > th dose independent rect. 19 10
91 396.44 temperature 30.0 1440 < th dose independent rect. 19 10
95 396.44 humidity 50.0 1440 > th dose independent rect. 19 10
97 396.44 atmosphere 995.0 1440 > th dose independent rect. 19 10
98 396.44 radiation 20.0 1440 < th dose independent rect. 19 10
110 396.44 temperature 10.0 1440 > th dose independent rect. 5 14
129 397.04 atmosphere 1010.0 10 < th dose independent rect. 19 20
177 398.16 atmosphere 995.0 90 > th dose dependent rect. 15 17
183 398.33 temperature 30.0 30 < th dose independent rect. 19 10
275 399.70 radiation 1.0 30 < th dose dependent sin 12 NA
278 399.85 wind 3.0 720 > th dose independent rect. 16 14
282 400.01 humidity 50.0 270 > th dose independent rect. 3 14
287 400.17 humidity 50.0 270 > th dose independent rect. 13 17
291 400.46 temperature 20.0 90 > th dose independent rect. 8 7
297 400.59 temperature 20.0 10 > th dose independent rect. 8 7
298 400.61 wind 1.0 10 > th dose independent rect. 8 7
303 400.74 humidity 90.0 10 < th dose independent rect. 8 7
304 400.76 wind 1.0 90 > th dose independent rect. 8 7
307 400.78 wind 1.0 10 > th dose independent rect. 4 15
312 400.79 wind 3.0 720 > th dose independent rect. 16 17
319 401.07 atmosphere 995.0 90 > th dose independent rect. 8 7
325 401.15 radiation 1.0 10 > th dose independent rect. 8 7
328 401.16 humidity 50.0 270 > th dose independent rect. 13 5
330 401.19 wind 1.0 90 > th dose independent rect. 18 10
346 401.61 radiation 1.0 30 < th dose independent sin 12 NA
368 401.95 wind 7.0 720 < th dose dependent rect. 4 3
369 401.96 precipitation 0.1 90 < th dose independent rect. 8 7
370 401.96 radiation 30.0 10 < th dose independent rect. 14 18
371 401.96 precipitation 0.1 90 < th dose dependent rect. 8 7
376 402.12 humidity 70.0 720 > th dose independent rect. 19 6
377 402.12 temperature 10.0 10 > th dose dependent rect. 8 7
378 402.14 wind 5.0 270 < th dose independent rect. 21 10
382 402.20 wind 9.0 10 < th dose independent rect. 8 7
389 402.29 temperature 10.0 10 > th dose independent rect. 8 7
391 402.29 atmosphere 995.0 10 > th dose independent rect. 8 7
392 402.29 atmosphere 1015.0 10 < th dose independent rect. 8 7
393 402.29 precipitation 0.1 10 < th dose independent rect. 8 7
394 402.29 temperature 10.0 10 > th dose independent rect. 15 17
395 402.29 precipitation 0.1 10 < th dose dependent rect. 8 7
398 402.33 humidity 50.0 90 > th dose independent rect. 5 13
419 402.55 temperature 10.0 1440 > th dose independent rect. 9 7
423 402.55 temperature 10.0 1440 > th dose independent rect. 16 17
428 402.56 atmosphere 995.0 90 > th dose independent rect. 5 13
447 402.68 atmosphere 1000.0 30 > th dose independent rect. 15 17
487 403.14 humidity 70.0 720 > th dose independent rect. 19 8
497 403.33 wind 9.0 30 < th dose independent rect. 15 17
502 403.44 wind 7.0 90 < th dose independent rect. 18 21
511 403.59 humidity 80.0 90 < th dose independent rect. 18 21
517 403.68 precipitation 0.1 90 < th dose independent rect. 18 21
518 403.68 precipitation 0.1 90 < th dose dependent rect. 18 21
519 403.69 atmosphere 995.0 90 > th dose dependent rect. 23 9
521 403.72 wind 7.0 10 < th dose independent rect. 19 20
523 403.73 wind 5.0 90 < th dose independent rect. 23 10
537 403.90 radiation 40.0 90 < th dose dependent rect. 5 13
574 404.13 atmosphere 1015.0 270 < th dose independent rect. 7 14
586 404.22 temperature 15.0 90 > th dose independent rect. 18 21
607 404.49 wind 9.0 1440 < th dose independent rect. 23 11
620 404.62 atmosphere 995.0 90 > th dose independent rect. 9 14
628 404.65 atmosphere 995.0 90 > th dose independent rect. 18 21
630 404.66 wind 3.0 720 > th dose independent sin 12 NA
640 404.72 atmosphere 1015.0 90 < th dose dependent rect. 15 3
647 404.93 atmosphere 1015.0 720 < th dose dependent rect. 17 2
665 405.19 precipitation 0.1 10 < th dose independent rect. 19 20
666 405.19 precipitation 0.1 10 < th dose dependent rect. 19 20
672 405.27 atmosphere 1015.0 10 < th dose dependent rect. 15 4
674 405.31 radiation 30.0 10 < th dose independent rect. 14 5
692 405.52 wind 1.0 720 > th dose dependent rect. 17 13
696 405.54 radiation 40.0 90 < th dose dependent rect. 13 5
704 405.61 radiation 40.0 90 < th dose independent rect. 15 3
708 405.65 wind 7.0 10 < th dose independent rect. 12 16
717 405.81 humidity 50.0 10 > th dose independent rect. 19 20
722 405.86 atmosphere 1015.0 270 < th dose independent rect. 18 17
724 405.88 temperature 10.0 90 > th dose independent rect. 15 3
726 405.88 atmosphere 1010.0 90 < th dose independent rect. 15 3
731 405.93 humidity 80.0 10 < th dose independent rect. 19 20
734 405.97 wind 1.0 270 > th dose independent rect. 7 14
749 406.14 wind 5.0 720 < th dose independent rect. 5 2
750 406.14 precipitation 0.1 270 < th dose independent rect. 7 14
751 406.14 precipitation 0.1 270 < th dose dependent rect. 7 14
754 406.18 radiation 40.0 90 < th dose independent rect. 13 5
771 406.29 radiation 1.0 270 > th dose independent rect. 17 20
774 406.32 temperature 30.0 90 < th dose independent rect. 8 7
785 406.36 wind 1.0 90 > th dose independent rect. 15 3
786 406.36 temperature 10.0 10 > th dose independent rect. 15 4
788 406.36 atmosphere 1010.0 10 < th dose independent rect. 15 4
790 406.36 temperature 10.0 10 > th dose independent rect. 19 20
791 406.36 atmosphere 995.0 10 > th dose independent rect. 19 20
798 406.40 wind 1.0 10 > th dose independent rect. 15 4
808 406.50 humidity 70.0 90 > th dose independent rect. 15 17
818 406.60 wind 1.0 270 > th dose independent rect. 7 4
819 406.60 precipitation 0.1 90 < th dose independent rect. 9 14
821 406.60 precipitation 0.1 90 < th dose dependent rect. 9 14
828 406.63 atmosphere 1015.0 30 < th dose dependent rect. 21 18
837 406.73 humidity 70.0 720 > th dose independent rect. 19 4
863 406.82 wind 1.0 720 > th dose dependent rect. 17 16
873 406.88 radiation 20.0 270 < th dose independent rect. 21 10
880 406.96 precipitation 0.1 10 < th dose independent rect. 15 4
882 406.96 precipitation 0.1 10 < th dose dependent rect. 15 4
890 407.00 wind 1.0 90 > th dose dependent rect. 15 3
892 407.00 temperature 30.0 30 < th dose dependent rect. 5 14
895 407.05 humidity 50.0 90 > th dose independent rect. 18 21
898 407.07 humidity 70.0 270 > th dose independent rect. 21 10
900 407.08 wind 9.0 270 < th dose independent rect. 7 14
916 407.15 temperature 10.0 270 > th dose independent rect. 21 10
917 407.15 temperature 30.0 270 < th dose independent rect. 21 10
918 407.15 humidity 50.0 270 > th dose independent rect. 21 10
920 407.15 atmosphere 995.0 270 > th dose independent rect. 21 10
922 407.15 temperature 10.0 270 > th dose independent rect. 7 14
925 407.18 radiation 30.0 10 < th dose dependent rect. 11 8
933 407.25 humidity 50.0 30 > th dose dependent rect. 18 11
940 407.29 temperature 10.0 90 > th dose dependent rect. 18 10