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Notice!
This gene did NOT pass the analysis criteria (log2(expression) > 5 in more than 80% of samples & normality of residuals was not rejected).
The modeling results may be unreliable.

Os09g0486700

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Similar to P90 ribosomal S6 kinase.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 4.33 (0.0391) R2 : 0.459
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : -1.95 (0.1) R2dE : 0.456 R2E : 0.454
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : -0.165 (0.0823) R2dN8 : 0.00562 R2N8 : 0.00329
σ : 0.734
deviance : 248.45
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_____
C
peak time of C : --
E
wheather : atmosphere
threshold : 1034
memory length : 59
response mode : < th
dose dependency : dose dependent
G
type of G : rect.
peak or start time of G : 12
open length of G : 16.6

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = atmosphere, response mode = < th, dose dependency = dose dependent, type of G = rect.)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
216.09 0.691 4.31 0.633 0.732 -1.83 -1.16 0.891 -0.18 11.6 1021 10 12 16.9
216.74 0.686 4.32 0.651 0.758 -1.77 -1.48 -- -0.171 11.1 1020 21 12 16.9
219.25 0.69 4.31 0.612 0.706 -1.82 -- 2 -0.166 11.5 1021 14 12 16.9
226.58 0.701 4.32 0.565 0.748 -1.77 -- -- -0.174 11.4 1021 33 11.9 16.8
231.29 0.708 4.3 0.598 -- -1.99 -- 1.75 -0.0779 -- 1031 52 12.2 16.5
260.16 0.756 4.26 0.568 1.74 -- -1.49 -- -0.0822 9.91 -- -- -- --
268.74 0.768 4.27 0.511 1.75 -- -- -- -0.0854 9.89 -- -- -- --
240.77 0.723 4.32 0.549 -- -1.98 -- -- -0.0996 -- 1032 55 12.2 16.5
234.8 0.714 4.32 -- 0.708 -1.75 -- -- -0.212 11.4 1022 44 11.9 16.8
451.49 0.993 4.31 0.491 -- -- -- -- -0.0852 -- -- -- -- --
275.61 0.777 4.28 -- 1.74 -- -- -- -0.142 9.87 -- -- -- --
248.45 0.734 4.33 -- -- -1.95 -- -- -0.165 -- 1034 59 12 16.6
457.86 0.999 4.32 -- -- -- -- -- -0.14 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 218.69 atmosphere 1015.0 10 < th dose dependent rect. 12 17
4 222.78 atmosphere 1000.0 90 > th dose independent rect. 4 21
5 223.19 atmosphere 1000.0 270 > th dose independent rect. 2 21
9 224.79 temperature 10.0 270 > th dose dependent rect. 6 22
10 224.88 radiation 40.0 90 < th dose dependent rect. 4 21
11 224.94 atmosphere 1015.0 30 < th dose dependent rect. 9 20
12 224.98 temperature 10.0 10 > th dose dependent rect. 12 17
16 225.33 radiation 30.0 90 < th dose independent rect. 4 21
17 225.35 atmosphere 1010.0 10 < th dose independent rect. 12 17
35 226.98 temperature 15.0 10 > th dose independent rect. 12 17
38 227.08 temperature 30.0 90 < th dose independent rect. 4 8
41 227.22 temperature 30.0 10 < th dose independent rect. 5 20
45 227.36 temperature 30.0 90 < th dose dependent rect. 4 21
53 227.65 temperature 30.0 10 < th dose independent rect. 5 7
57 227.82 atmosphere 995.0 90 > th dose dependent rect. 4 21
62 228.24 temperature 10.0 270 > th dose dependent rect. 23 15
63 228.29 wind 7.0 30 < th dose independent rect. 12 17
65 228.37 atmosphere 995.0 270 > th dose dependent rect. 13 10
69 228.48 atmosphere 995.0 10 > th dose dependent rect. 5 20
72 228.54 atmosphere 1000.0 30 > th dose independent rect. 5 7
84 228.93 radiation 30.0 90 < th dose independent rect. 4 8
95 229.18 radiation 40.0 30 < th dose dependent rect. 5 7
97 229.22 temperature 30.0 270 < th dose dependent rect. 2 21
104 229.39 temperature 30.0 90 < th dose independent rect. 4 21
126 230.17 radiation 20.0 270 < th dose dependent rect. 4 7
142 230.41 temperature 10.0 90 > th dose dependent rect. 1 14
143 230.43 humidity 70.0 10 > th dose independent rect. 5 20
146 230.46 radiation 20.0 270 < th dose dependent rect. 2 22
149 230.57 temperature 10.0 10 > th dose dependent rect. 1 15
150 230.58 wind 9.0 10 < th dose dependent rect. 12 17
193 231.12 temperature 10.0 30 > th dose independent rect. 5 7
196 231.12 atmosphere 1015.0 30 < th dose independent rect. 5 7
197 231.12 precipitation 0.1 30 < th dose independent rect. 5 7
199 231.12 precipitation 0.1 30 < th dose dependent rect. 5 7
200 231.13 humidity 50.0 10 > th dose independent rect. 12 17
218 231.34 humidity 60.0 90 > th dose dependent rect. 4 21
246 231.65 temperature 10.0 1440 > th dose independent rect. 5 8
249 231.65 atmosphere 995.0 1440 > th dose independent rect. 5 8
250 231.65 temperature 10.0 1440 > th dose independent rect. 13 16
262 231.74 temperature 30.0 10 < th dose independent rect. 5 14
277 231.89 temperature 15.0 10 > th dose dependent rect. 8 21
287 231.99 wind 9.0 30 < th dose independent rect. 5 7
290 232.02 atmosphere 995.0 270 > th dose dependent rect. 2 21
322 232.30 temperature 30.0 90 < th dose independent rect. 4 14
327 232.37 radiation 10.0 270 < th dose independent rect. 2 22
329 232.39 precipitation 0.1 10 < th dose independent rect. 12 17
330 232.39 precipitation 0.1 10 < th dose dependent rect. 12 17
343 232.54 temperature 10.0 270 > th dose dependent rect. 17 23
353 232.68 atmosphere 1000.0 270 > th dose independent rect. 13 10
367 232.78 humidity 50.0 30 > th dose dependent rect. 5 7
403 233.21 temperature 25.0 14400 > th dose dependent rect. 7 1
412 233.26 atmosphere 1000.0 90 > th dose independent rect. 13 23
430 233.47 temperature 15.0 90 > th dose dependent rect. 1 3
444 233.62 humidity 50.0 30 > th dose independent rect. 5 7
458 233.69 temperature 25.0 43200 > th dose independent rect. 21 1
467 233.75 temperature 25.0 43200 < th dose independent rect. 20 2
473 233.77 temperature 30.0 43200 < th dose independent rect. 5 5
499 233.89 temperature 30.0 43200 < th dose independent rect. 19 15
503 233.91 temperature 30.0 43200 < th dose independent rect. 21 13
508 233.92 temperature 30.0 43200 < th dose independent rect. 23 11
513 233.95 temperature 30.0 43200 < th dose independent rect. 1 9
520 233.99 atmosphere 995.0 30 > th dose dependent rect. 13 23
535 234.12 temperature 30.0 43200 > th dose independent rect. 8 2
568 234.23 temperature 25.0 43200 > th dose dependent rect. 20 1
606 234.32 atmosphere 995.0 30 > th dose independent rect. 12 17
655 234.58 temperature 30.0 90 < th dose dependent rect. 4 8
657 234.60 temperature 30.0 43200 > th dose dependent rect. 11 2
659 234.60 temperature 30.0 43200 > th dose dependent rect. 8 5
749 234.75 atmosphere 995.0 10 > th dose dependent rect. 16 9
763 234.78 temperature 30.0 43200 > th dose dependent sin 8 NA
782 234.81 temperature 30.0 43200 < th dose independent sin 8 NA
783 234.81 temperature 20.0 90 > th dose independent rect. 1 3
794 234.82 temperature 15.0 270 > th dose dependent rect. 23 3
805 234.84 temperature 30.0 43200 > th dose independent sin 8 NA
820 234.85 temperature 30.0 90 < th dose dependent rect. 4 14
822 234.86 temperature 25.0 14400 < th dose independent rect. 6 1
899 234.97 atmosphere 1015.0 90 < th dose dependent rect. 1 3
924 235.02 wind 1.0 10 > th dose independent rect. 5 7