Os09g0484200
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
FiT-DB / Search/ Help/ Sample detail
|
Os09g0484200 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Conserved hypothetical protein.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = radiation,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 329.26 | 0.853 | 12.2 | 1.56 | 6.2 | -9.49 | 1.89 | 0.136 | -0.233 | 6.2 | 0.36 | 725 | -- | -- |
| 329.24 | 0.845 | 12.2 | 1.56 | 6.22 | -9.52 | 2 | -- | -0.231 | 6.21 | 0.3594 | 726 | -- | -- |
| 330.36 | 0.847 | 12.2 | 1.5 | 6.15 | -9.43 | -- | 2.28 | -0.267 | 6.19 | 0.35 | 725 | -- | -- |
| 338.94 | 0.857 | 12.2 | 1.59 | 6.1 | -9.34 | -- | -- | -0.24 | 6.19 | 0.3548 | 725 | -- | -- |
| 445.69 | 0.983 | 12.4 | 1.12 | -- | -4.83 | -- | -1.47 | -0.65 | -- | 0.17 | 1665 | -- | -- |
| 505.36 | 1.05 | 12.3 | 2.4 | 1.6 | -- | -0.00649 | -- | 0.141 | 15.9 | -- | -- | -- | -- |
| 505.36 | 1.05 | 12.3 | 2.4 | 1.6 | -- | -- | -- | 0.141 | 15.8 | -- | -- | -- | -- |
| 417.01 | 0.951 | 12.4 | 1.74 | -- | -3.86 | -- | -- | -0.316 | -- | 0.18 | 1689 | -- | -- |
| 399.89 | 0.931 | 12.2 | -- | 7.44 | -11 | -- | -- | -0.381 | 6.12 | 0.2798 | 729 | -- | -- |
| 645.69 | 1.19 | 12.2 | 2.33 | -- | -- | -- | -- | 0.0986 | -- | -- | -- | -- | -- |
| 656.74 | 1.2 | 12.3 | -- | 1.55 | -- | -- | -- | -0.126 | 15.9 | -- | -- | -- | -- |
| 486.68 | 1.03 | 12.4 | -- | -- | -4.33 | -- | -- | -0.503 | -- | 0.1747 | 1667 | -- | -- |
| 788.97 | 1.31 | 12.3 | -- | -- | -- | -- | -- | -0.16 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 333.59 | radiation | 1 | 720 | < th | dose dependent | rect. | 5 | 16 |
| 2 | 338.14 | radiation | 1 | 720 | < th | dose dependent | rect. | 4 | 23 |
| 3 | 338.23 | radiation | 1 | 720 | < th | dose dependent | rect. | 15 | 23 |
| 4 | 338.33 | wind | 7 | 43200 | < th | dose independent | rect. | 15 | 1 |
| 5 | 338.59 | radiation | 1 | 720 | < th | dose dependent | rect. | 20 | 23 |
| 6 | 338.89 | radiation | 1 | 720 | < th | dose dependent | rect. | 13 | 23 |
| 7 | 338.90 | wind | 7 | 43200 | > th | dose independent | rect. | 15 | 1 |
| 8 | 339.06 | wind | 5 | 43200 | > th | dose dependent | rect. | 15 | 1 |
| 9 | 339.21 | radiation | 1 | 720 | < th | dose dependent | no | NA | NA |
| 12 | 339.42 | radiation | 1 | 720 | < th | dose dependent | rect. | 8 | 23 |
| 36 | 343.36 | radiation | 1 | 720 | < th | dose dependent | sin | 23 | NA |
| 48 | 345.18 | radiation | 1 | 720 | < th | dose dependent | rect. | 22 | 23 |
| 52 | 345.99 | wind | 5 | 43200 | < th | dose independent | rect. | 14 | 8 |
| 53 | 346.05 | radiation | 1 | 720 | < th | dose dependent | sin | 13 | NA |
| 54 | 346.06 | wind | 3 | 43200 | > th | dose dependent | rect. | 14 | 8 |
| 55 | 346.22 | wind | 5 | 43200 | > th | dose dependent | rect. | 15 | 4 |
| 61 | 346.38 | wind | 5 | 43200 | > th | dose independent | rect. | 14 | 8 |
| 67 | 346.77 | radiation | 1 | 720 | < th | dose independent | rect. | 5 | 16 |
| 81 | 347.74 | humidity | 80 | 43200 | > th | dose independent | rect. | 21 | 2 |
| 95 | 348.43 | humidity | 80 | 43200 | > th | dose independent | rect. | 20 | 4 |
| 102 | 348.79 | radiation | 1 | 720 | < th | dose dependent | rect. | 1 | 23 |
| 105 | 348.93 | wind | 7 | 14400 | > th | dose independent | rect. | 5 | 11 |
| 107 | 348.95 | wind | 7 | 14400 | < th | dose independent | rect. | 5 | 11 |
| 133 | 349.94 | wind | 9 | 43200 | < th | dose dependent | rect. | 11 | 12 |
| 148 | 350.43 | wind | 7 | 14400 | < th | dose independent | rect. | 10 | 6 |
| 166 | 350.81 | radiation | 1 | 720 | < th | dose independent | sin | 23 | NA |
| 175 | 351.00 | humidity | 80 | 43200 | < th | dose independent | rect. | 20 | 3 |
| 177 | 351.05 | wind | 3 | 43200 | > th | dose dependent | sin | 18 | NA |
| 198 | 351.38 | wind | 7 | 14400 | > th | dose independent | rect. | 9 | 7 |
| 211 | 351.62 | wind | 5 | 14400 | > th | dose dependent | rect. | 10 | 6 |
| 230 | 352.00 | wind | 3 | 43200 | > th | dose dependent | rect. | 12 | 6 |
| 231 | 352.01 | radiation | 1 | 720 | > th | dose independent | sin | 14 | NA |
| 252 | 352.36 | wind | 9 | 43200 | < th | dose dependent | sin | 19 | NA |
| 283 | 352.74 | wind | 9 | 43200 | < th | dose dependent | rect. | 11 | 6 |
| 321 | 353.22 | wind | 5 | 14400 | > th | dose dependent | rect. | 5 | 11 |
| 360 | 353.65 | wind | 7 | 14400 | > th | dose independent | rect. | 5 | 16 |
| 389 | 353.98 | radiation | 1 | 720 | < th | dose independent | rect. | 8 | 23 |
| 393 | 354.05 | wind | 7 | 14400 | < th | dose independent | sin | 0 | NA |
| 401 | 354.12 | wind | 7 | 14400 | < th | dose independent | rect. | 5 | 16 |
| 412 | 354.26 | wind | 7 | 14400 | > th | dose independent | rect. | 9 | 12 |
| 416 | 354.27 | wind | 7 | 14400 | > th | dose independent | sin | 0 | NA |
| 420 | 354.29 | wind | 7 | 14400 | < th | dose independent | rect. | 9 | 12 |
| 429 | 354.35 | wind | 1 | 43200 | < th | dose dependent | rect. | 8 | 20 |
| 436 | 354.44 | wind | 5 | 43200 | < th | dose independent | sin | 17 | NA |
| 451 | 354.58 | radiation | 1 | 720 | > th | dose independent | rect. | 7 | 23 |
| 500 | 355.15 | wind | 1 | 43200 | < th | dose independent | rect. | 24 | 2 |
| 502 | 355.15 | humidity | 80 | 43200 | > th | dose independent | rect. | 20 | 8 |
| 609 | 356.07 | wind | 5 | 14400 | > th | dose dependent | sin | 23 | NA |
| 665 | 356.62 | humidity | 80 | 43200 | < th | dose independent | rect. | 20 | 9 |
| 671 | 356.68 | wind | 5 | 43200 | > th | dose independent | sin | 17 | NA |
| 763 | 357.32 | radiation | 1 | 720 | > th | dose independent | sin | 22 | NA |
| 765 | 357.33 | wind | 1 | 43200 | < th | dose dependent | rect. | 11 | 17 |
| 778 | 357.47 | radiation | 1 | 720 | < th | dose independent | no | NA | NA |
| 783 | 357.50 | radiation | 1 | 720 | < th | dose independent | rect. | 4 | 23 |
| 816 | 357.81 | radiation | 1 | 720 | < th | dose independent | rect. | 12 | 23 |
| 838 | 358.00 | radiation | 1 | 720 | < th | dose independent | rect. | 15 | 23 |
| 850 | 358.10 | wind | 3 | 43200 | > th | dose independent | rect. | 20 | 1 |
| 870 | 358.29 | wind | 5 | 43200 | < th | dose dependent | rect. | 20 | 1 |
| 879 | 358.40 | radiation | 1 | 720 | < th | dose independent | rect. | 20 | 23 |
| 936 | 358.87 | radiation | 1 | 720 | > th | dose independent | rect. | 5 | 14 |
| 958 | 359.05 | humidity | 80 | 43200 | < th | dose independent | rect. | 20 | 13 |