Os09g0480600
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Hypothetical protein.
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Os09g0480600 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 61.15 | 0.367 | 9.06 | 0.623 | 1.05 | -2.83 | 0.803 | -0.216 | 0.183 | 15.1 | 15.04 | 8 | -- | -- |
| 60.98 | 0.366 | 9.06 | 0.647 | 1.04 | -2.84 | 0.726 | -- | 0.188 | 15.1 | 15.04 | 8 | -- | -- |
| 62.35 | 0.371 | 9.05 | 0.737 | 1.03 | -2.85 | -- | 0.596 | 0.209 | 15.2 | 14.76 | 6 | -- | -- |
| 62.64 | 0.371 | 9.06 | 0.656 | 1.04 | -2.87 | -- | -- | 0.187 | 15.2 | 14.4 | 5 | -- | -- |
| 103.65 | 0.477 | 9.08 | 0.519 | -- | -1.71 | -- | 0.842 | 0.0375 | -- | 14.68 | 4 | -- | -- |
| 140.19 | 0.555 | 9.15 | 0.104 | 0.307 | -- | -0.344 | -- | -0.211 | 18.1 | -- | -- | -- | -- |
| 140.41 | 0.555 | 9.15 | 0.108 | 0.308 | -- | -- | -- | -0.212 | 17.6 | -- | -- | -- | -- |
| 104.23 | 0.478 | 9.1 | 0.403 | -- | -1.7 | -- | -- | 0.00549 | -- | 13.29 | 2 | -- | -- |
| 72.94 | 0.4 | 9.09 | -- | 0.936 | -2.55 | -- | -- | 0.0763 | 15.3 | 13.65 | 3 | -- | -- |
| 145.33 | 0.563 | 9.15 | 0.0984 | -- | -- | -- | -- | -0.219 | -- | -- | -- | -- | -- |
| 140.71 | 0.555 | 9.16 | -- | 0.306 | -- | -- | -- | -0.224 | 17.7 | -- | -- | -- | -- |
| 108.28 | 0.486 | 9.11 | -- | -- | -1.58 | -- | -- | -0.0534 | -- | 12.26 | 3 | -- | -- |
| 145.58 | 0.563 | 9.15 | -- | -- | -- | -- | -- | -0.23 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 58.50 | temperature | 10 | 4320 | > th | dose dependent | rect. | 20 | 4 |
| 2 | 58.54 | temperature | 30 | 4320 | < th | dose dependent | rect. | 20 | 4 |
| 58 | 59.57 | temperature | 10 | 4320 | > th | dose dependent | rect. | 19 | 15 |
| 59 | 59.58 | temperature | 10 | 1440 | > th | dose dependent | rect. | 3 | 8 |
| 70 | 59.62 | temperature | 30 | 4320 | < th | dose dependent | rect. | 19 | 15 |
| 73 | 59.64 | temperature | 30 | 90 | < th | dose dependent | rect. | 5 | 23 |
| 112 | 59.82 | temperature | 30 | 1440 | < th | dose dependent | rect. | 3 | 8 |
| 139 | 59.93 | temperature | 10 | 4320 | > th | dose dependent | sin | 11 | NA |
| 153 | 60.02 | temperature | 30 | 4320 | < th | dose dependent | sin | 11 | NA |
| 470 | 61.14 | temperature | 15 | 270 | > th | dose dependent | rect. | 16 | 23 |
| 512 | 61.27 | temperature | 15 | 10 | > th | dose dependent | no | NA | NA |
| 650 | 61.63 | temperature | 10 | 4320 | > th | dose dependent | no | NA | NA |
| 701 | 61.74 | temperature | 30 | 90 | < th | dose dependent | no | NA | NA |
| 739 | 61.79 | temperature | 30 | 90 | < th | dose dependent | rect. | 13 | 23 |
| 762 | 61.84 | temperature | 10 | 4320 | > th | dose dependent | rect. | 1 | 23 |
| 767 | 61.85 | temperature | 30 | 270 | < th | dose dependent | rect. | 19 | 23 |
| 776 | 61.87 | temperature | 10 | 4320 | > th | dose dependent | rect. | 23 | 23 |
| 880 | 62.08 | temperature | 30 | 90 | < th | dose dependent | rect. | 15 | 23 |
| 956 | 62.23 | temperature | 30 | 4320 | < th | dose dependent | no | NA | NA |
| 982 | 62.26 | temperature | 30 | 4320 | < th | dose dependent | rect. | 8 | 23 |
| 993 | 62.28 | temperature | 30 | 10 | < th | dose dependent | rect. | 21 | 23 |