Os09g0480400
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Glycosyltransferase QUASIMODO1 (EC 2.4.1.-).
FiT-DB / Search/ Help/ Sample detail
|
Os09g0480400 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Similar to Glycosyltransferase QUASIMODO1 (EC 2.4.1.-).
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 172.75 | 0.618 | 3.72 | -1.22 | 0.303 | 0.656 | -0.627 | -1.21 | -0.305 | 15 | 25.4 | 1196 | -- | -- |
| 173.17 | 0.613 | 3.69 | -0.936 | 0.302 | 0.545 | -0.584 | -- | -0.232 | 15.1 | 25.43 | 1166 | -- | -- |
| 173.97 | 0.614 | 3.71 | -1.16 | 0.304 | 0.655 | -- | -0.907 | -0.29 | 14.7 | 25.4 | 1151 | -- | -- |
| 174.2 | 0.615 | 3.69 | -0.943 | 0.3 | 0.55 | -- | -- | -0.232 | 14.9 | 25.6 | 1167 | -- | -- |
| 177.16 | 0.62 | 3.71 | -1.16 | -- | 0.671 | -- | -1.03 | -0.273 | -- | 26.1 | 1966 | -- | -- |
| 183.28 | 0.635 | 3.68 | -0.767 | 0.22 | -- | -0.724 | -- | -0.185 | 15.7 | -- | -- | -- | -- |
| 184.84 | 0.637 | 3.68 | -0.778 | 0.218 | -- | -- | -- | -0.189 | 16 | -- | -- | -- | -- |
| 177.35 | 0.62 | 3.68 | -0.935 | -- | 0.581 | -- | -- | -0.186 | -- | 27.45 | 1938 | -- | -- |
| 195.53 | 0.651 | 3.65 | -- | 0.279 | 0.327 | -- | -- | -0.0587 | 15.5 | 28.5 | 1268 | -- | -- |
| 187.45 | 0.64 | 3.68 | -0.787 | -- | -- | -- | -- | -0.195 | -- | -- | -- | -- | -- |
| 200.8 | 0.663 | 3.66 | -- | 0.234 | -- | -- | -- | -0.102 | 15.9 | -- | -- | -- | -- |
| 198.91 | 0.657 | 3.65 | -- | -- | 0.397 | -- | -- | -0.0698 | -- | 28.42 | 1939 | -- | -- |
| 203.79 | 0.666 | 3.66 | -- | -- | -- | -- | -- | -0.108 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 169.52 | temperature | 25 | 270 | > th | dose independent | rect. | 14 | 18 |
| 8 | 170.71 | humidity | 60 | 4320 | > th | dose independent | rect. | 12 | 1 |
| 11 | 171.02 | temperature | 25 | 270 | < th | dose independent | rect. | 15 | 11 |
| 12 | 171.07 | humidity | 90 | 14400 | < th | dose dependent | rect. | 16 | 2 |
| 14 | 171.12 | humidity | 50 | 14400 | > th | dose dependent | rect. | 16 | 2 |
| 16 | 171.16 | humidity | 60 | 4320 | < th | dose independent | rect. | 12 | 1 |
| 20 | 171.26 | humidity | 60 | 4320 | < th | dose dependent | rect. | 15 | 5 |
| 42 | 171.36 | humidity | 70 | 14400 | < th | dose independent | rect. | 17 | 1 |
| 53 | 171.43 | temperature | 25 | 270 | > th | dose independent | rect. | 14 | 12 |
| 60 | 171.49 | humidity | 90 | 14400 | < th | dose dependent | rect. | 12 | 7 |
| 96 | 171.68 | humidity | 60 | 14400 | < th | dose independent | rect. | 14 | 4 |
| 106 | 171.71 | humidity | 70 | 14400 | < th | dose dependent | rect. | 14 | 21 |
| 152 | 171.87 | humidity | 60 | 14400 | > th | dose independent | rect. | 14 | 4 |
| 167 | 171.89 | humidity | 60 | 14400 | < th | dose independent | sin | 18 | NA |
| 168 | 171.89 | humidity | 60 | 14400 | < th | dose independent | rect. | 11 | 21 |
| 182 | 171.91 | radiation | 20 | 1440 | > th | dose independent | rect. | 15 | 17 |
| 190 | 171.92 | humidity | 60 | 14400 | > th | dose independent | rect. | 9 | 9 |
| 213 | 171.93 | humidity | 60 | 14400 | > th | dose independent | rect. | 20 | 22 |
| 231 | 171.94 | humidity | 60 | 14400 | > th | dose independent | rect. | 6 | 12 |
| 243 | 171.94 | humidity | 60 | 14400 | > th | dose independent | rect. | 9 | 23 |
| 244 | 171.94 | humidity | 60 | 14400 | > th | dose independent | rect. | 12 | 23 |
| 247 | 171.94 | humidity | 70 | 14400 | < th | dose dependent | sin | 18 | NA |
| 256 | 171.95 | humidity | 70 | 14400 | > th | dose independent | rect. | 17 | 1 |
| 273 | 171.96 | humidity | 60 | 14400 | < th | dose independent | rect. | 20 | 22 |
| 280 | 171.96 | humidity | 70 | 14400 | < th | dose dependent | rect. | 6 | 12 |
| 304 | 171.97 | humidity | 60 | 14400 | < th | dose independent | rect. | 6 | 12 |
| 341 | 171.97 | humidity | 70 | 14400 | < th | dose dependent | rect. | 9 | 23 |
| 343 | 171.98 | humidity | 60 | 14400 | > th | dose independent | sin | 20 | NA |
| 354 | 171.98 | humidity | 60 | 14400 | > th | dose independent | rect. | 9 | 12 |
| 371 | 171.98 | humidity | 60 | 14400 | > th | dose independent | rect. | 16 | 23 |
| 375 | 171.98 | humidity | 90 | 14400 | < th | dose dependent | sin | 21 | NA |
| 413 | 171.99 | humidity | 60 | 14400 | > th | dose independent | rect. | 14 | 23 |
| 424 | 172.00 | humidity | 60 | 14400 | > th | dose independent | no | NA | NA |
| 644 | 172.05 | humidity | 60 | 14400 | < th | dose independent | no | NA | NA |
| 705 | 172.05 | humidity | 70 | 14400 | < th | dose dependent | no | NA | NA |
| 811 | 172.07 | humidity | 60 | 14400 | < th | dose independent | rect. | 15 | 23 |
| 825 | 172.08 | temperature | 25 | 270 | < th | dose independent | sin | 16 | NA |
| 841 | 172.08 | humidity | 50 | 14400 | > th | dose dependent | rect. | 6 | 13 |
| 872 | 172.09 | temperature | 20 | 90 | > th | dose dependent | rect. | 17 | 16 |
| 915 | 172.11 | humidity | 50 | 14400 | > th | dose dependent | sin | 21 | NA |
| 946 | 172.13 | humidity | 50 | 14400 | > th | dose dependent | rect. | 12 | 1 |
| 957 | 172.14 | radiation | 1 | 270 | > th | dose independent | rect. | 17 | 13 |