Os09g0479200
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Receptor protein kinase-like protein.
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Os09g0479200 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Receptor protein kinase-like protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 121.78 | 0.518 | 7.1 | -0.00716 | 0.685 | -0.67 | -0.365 | -0.375 | -0.552 | 18.2 | 21.8 | 661 | -- | -- |
| 122.2 | 0.515 | 7.09 | 0.097 | 0.681 | -0.659 | -0.501 | -- | -0.531 | 18.2 | 21.9 | 660 | -- | -- |
| 122.07 | 0.515 | 7.1 | -0.0291 | 0.68 | -0.676 | -- | -0.45 | -0.555 | 18.2 | 21.83 | 660 | -- | -- |
| 122.87 | 0.516 | 7.09 | 0.109 | 0.683 | -0.661 | -- | -- | -0.527 | 18.2 | 21.85 | 660 | -- | -- |
| 143.64 | 0.558 | 7.09 | -0.0166 | -- | -0.67 | -- | -0.488 | -0.564 | -- | 21.8 | 1139 | -- | -- |
| 140.59 | 0.556 | 7.13 | -0.124 | 0.593 | -- | -0.508 | -- | -0.731 | 17.7 | -- | -- | -- | -- |
| 141.22 | 0.556 | 7.13 | -0.121 | 0.59 | -- | -- | -- | -0.733 | 17.6 | -- | -- | -- | -- |
| 144.3 | 0.559 | 7.08 | 0.0772 | -- | -0.617 | -- | -- | -0.537 | -- | 22.2 | 1248 | -- | -- |
| 123.16 | 0.517 | 7.1 | -- | 0.678 | -0.639 | -- | -- | -0.545 | 18.2 | 21.85 | 660 | -- | -- |
| 159.3 | 0.59 | 7.13 | -0.14 | -- | -- | -- | -- | -0.748 | -- | -- | -- | -- | -- |
| 141.6 | 0.557 | 7.13 | -- | 0.592 | -- | -- | -- | -0.72 | 17.6 | -- | -- | -- | -- |
| 144.44 | 0.56 | 7.08 | -- | -- | -0.59 | -- | -- | -0.554 | -- | 22.25 | 1160 | -- | -- |
| 159.82 | 0.59 | 7.12 | -- | -- | -- | -- | -- | -0.732 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 115.81 | temperature | 25.0 | 270 | < th | dose dependent | rect. | 24 | 10 |
| 6 | 117.08 | temperature | 25.0 | 270 | < th | dose dependent | rect. | 24 | 20 |
| 15 | 117.70 | temperature | 25.0 | 270 | < th | dose dependent | sin | 6 | NA |
| 17 | 117.75 | temperature | 15.0 | 270 | > th | dose dependent | sin | 7 | NA |
| 22 | 117.90 | temperature | 20.0 | 720 | > th | dose dependent | rect. | 2 | 1 |
| 45 | 118.81 | temperature | 15.0 | 270 | > th | dose dependent | rect. | 23 | 13 |
| 71 | 119.77 | temperature | 25.0 | 720 | < th | dose dependent | rect. | 23 | 3 |
| 72 | 119.78 | temperature | 25.0 | 720 | < th | dose dependent | rect. | 1 | 1 |
| 86 | 120.28 | temperature | 10.0 | 720 | > th | dose dependent | rect. | 21 | 8 |
| 126 | 121.14 | temperature | 25.0 | 720 | < th | dose dependent | sin | 11 | NA |
| 143 | 121.39 | temperature | 25.0 | 720 | < th | dose dependent | rect. | 17 | 14 |
| 239 | 122.08 | temperature | 25.0 | 270 | < th | dose independent | rect. | 23 | 11 |
| 265 | 122.28 | temperature | 15.0 | 10 | > th | dose dependent | rect. | 2 | 14 |
| 319 | 122.68 | temperature | 25.0 | 270 | > th | dose independent | rect. | 23 | 13 |
| 350 | 122.89 | temperature | 25.0 | 270 | > th | dose independent | rect. | 23 | 10 |
| 364 | 122.97 | wind | 7.0 | 43200 | > th | dose independent | rect. | 18 | 1 |
| 401 | 123.19 | wind | 7.0 | 43200 | > th | dose dependent | rect. | 18 | 1 |
| 427 | 123.31 | wind | 9.0 | 14400 | > th | dose dependent | rect. | 5 | 8 |
| 438 | 123.35 | wind | 7.0 | 43200 | < th | dose independent | rect. | 18 | 1 |
| 447 | 123.40 | temperature | 15.0 | 720 | > th | dose dependent | rect. | 19 | 14 |
| 469 | 123.50 | wind | 9.0 | 14400 | < th | dose independent | rect. | 5 | 8 |
| 478 | 123.56 | atmosphere | 1005.0 | 14400 | < th | dose independent | rect. | 23 | 1 |
| 491 | 123.64 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 21 | 1 |
| 520 | 123.75 | wind | 9.0 | 14400 | > th | dose dependent | rect. | 9 | 4 |
| 533 | 123.80 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 20 | 3 |
| 545 | 123.86 | wind | 9.0 | 43200 | > th | dose dependent | rect. | 18 | 4 |
| 548 | 123.87 | wind | 9.0 | 14400 | < th | dose independent | rect. | 1 | 12 |
| 549 | 123.87 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 20 | 5 |
| 593 | 124.08 | wind | 9.0 | 14400 | > th | dose independent | rect. | 5 | 8 |
| 609 | 124.12 | temperature | 25.0 | 720 | < th | dose dependent | rect. | 11 | 22 |
| 628 | 124.16 | temperature | 25.0 | 720 | < th | dose dependent | rect. | 9 | 22 |
| 647 | 124.21 | atmosphere | 1005.0 | 14400 | > th | dose independent | rect. | 23 | 1 |
| 653 | 124.22 | wind | 7.0 | 14400 | > th | dose independent | rect. | 11 | 2 |
| 666 | 124.27 | temperature | 25.0 | 720 | < th | dose dependent | no | NA | NA |
| 695 | 124.36 | temperature | 15.0 | 270 | > th | dose dependent | rect. | 17 | 21 |
| 704 | 124.39 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 21 | 1 |
| 707 | 124.40 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 21 | 1 |
| 708 | 124.40 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 21 | 1 |
| 726 | 124.44 | wind | 7.0 | 14400 | < th | dose independent | rect. | 11 | 2 |
| 732 | 124.45 | temperature | 25.0 | 720 | < th | dose dependent | rect. | 5 | 23 |
| 745 | 124.50 | temperature | 25.0 | 270 | > th | dose independent | sin | 7 | NA |
| 790 | 124.63 | wind | 9.0 | 43200 | > th | dose dependent | rect. | 18 | 12 |
| 801 | 124.68 | wind | 9.0 | 14400 | > th | dose independent | rect. | 24 | 13 |
| 809 | 124.70 | wind | 9.0 | 14400 | > th | dose independent | rect. | 9 | 4 |
| 816 | 124.71 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 17 | 1 |
| 823 | 124.73 | temperature | 25.0 | 270 | < th | dose independent | sin | 7 | NA |
| 851 | 124.80 | temperature | 25.0 | 720 | < th | dose dependent | rect. | 3 | 23 |
| 893 | 124.92 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 20 | 3 |
| 895 | 124.92 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 20 | 3 |
| 901 | 124.94 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 20 | 3 |
| 905 | 124.95 | temperature | 20.0 | 720 | > th | dose independent | rect. | 21 | 8 |
| 944 | 125.07 | wind | 3.0 | 1440 | < th | dose independent | rect. | 2 | 1 |
| 961 | 125.10 | wind | 9.0 | 14400 | > th | dose dependent | rect. | 1 | 12 |
| 988 | 125.15 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 17 | 1 |