Os09g0478600
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : RINGv domain containing protein.
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Os09g0478600 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : RINGv domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 129.32 | 0.534 | 13.1 | 1.11 | 2.22 | -0.842 | 1.24 | -1.69 | 0.585 | 22.6 | 25.09 | 90 | -- | -- |
| 130.04 | 0.531 | 13.1 | 1.31 | 2.25 | -1.02 | 1.4 | -- | 0.6 | 22.6 | 26.3 | 120 | -- | -- |
| 135.37 | 0.546 | 13.1 | 0.94 | 2.16 | -0.792 | -- | -2.75 | 0.56 | 22.7 | 24.9 | 90 | -- | -- |
| 137.87 | 0.547 | 13.1 | 1.26 | 2.22 | -1.02 | -- | -- | 0.634 | 22.5 | 25.16 | 86 | -- | -- |
| 380.3 | 0.908 | 13 | 1.22 | -- | -2.04 | -- | -2.12 | 0.817 | -- | 21.05 | 2 | -- | -- |
| 145.99 | 0.566 | 13.1 | 1.17 | 2.34 | -- | 1.49 | -- | 0.566 | 23.3 | -- | -- | -- | -- |
| 155.44 | 0.584 | 13.1 | 1.11 | 2.34 | -- | -- | -- | 0.561 | 23.2 | -- | -- | -- | -- |
| 384.73 | 0.914 | 12.9 | 1.57 | -- | -2.16 | -- | -- | 0.922 | -- | 21.43 | 2 | -- | -- |
| 178.92 | 0.623 | 13.1 | -- | 2.24 | -0.769 | -- | -- | 0.473 | 22.8 | 25.35 | 51 | -- | -- |
| 497.24 | 1.04 | 13 | 1.16 | -- | -- | -- | -- | 0.582 | -- | -- | -- | -- | -- |
| 187.66 | 0.641 | 13.1 | -- | 2.35 | -- | -- | -- | 0.438 | 23.3 | -- | -- | -- | -- |
| 443.13 | 0.98 | 13 | -- | -- | -1.88 | -- | -- | 0.595 | -- | 24.58 | 3 | -- | -- |
| 532.91 | 1.08 | 13 | -- | -- | -- | -- | -- | 0.453 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 119.19 | temperature | 15.0 | 90 | > th | dose dependent | rect. | 5 | 13 |
| 4 | 121.55 | wind | 7.0 | 270 | < th | dose independent | rect. | 20 | 11 |
| 5 | 121.82 | temperature | 30.0 | 30 | < th | dose independent | rect. | 7 | 16 |
| 6 | 121.94 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 7 | 13 |
| 7 | 122.14 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 3 | 13 |
| 8 | 122.24 | radiation | 40.0 | 270 | < th | dose dependent | rect. | 20 | 11 |
| 10 | 122.42 | temperature | 30.0 | 90 | < th | dose independent | rect. | 7 | 14 |
| 13 | 122.57 | radiation | 40.0 | 270 | < th | dose dependent | rect. | 7 | 13 |
| 14 | 122.59 | radiation | 20.0 | 270 | < th | dose independent | rect. | 20 | 11 |
| 15 | 122.65 | humidity | 70.0 | 270 | > th | dose independent | rect. | 20 | 11 |
| 19 | 122.95 | temperature | 10.0 | 270 | > th | dose independent | rect. | 20 | 11 |
| 20 | 122.95 | temperature | 30.0 | 270 | < th | dose independent | rect. | 20 | 11 |
| 21 | 122.95 | humidity | 50.0 | 270 | > th | dose independent | rect. | 20 | 11 |
| 23 | 122.95 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 20 | 11 |
| 25 | 122.95 | temperature | 10.0 | 270 | > th | dose independent | rect. | 7 | 13 |
| 26 | 122.95 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 7 | 13 |
| 28 | 123.00 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 20 | 11 |
| 29 | 123.00 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 20 | 11 |
| 36 | 123.50 | atmosphere | 1000.0 | 30 | > th | dose independent | rect. | 7 | 16 |
| 37 | 123.64 | radiation | 40.0 | 270 | < th | dose independent | rect. | 7 | 13 |
| 39 | 123.73 | temperature | 30.0 | 90 | < th | dose dependent | rect. | 7 | 14 |
| 40 | 123.75 | temperature | 15.0 | 90 | > th | dose dependent | rect. | 23 | 19 |
| 42 | 123.94 | radiation | 1.0 | 30 | > th | dose independent | rect. | 12 | 19 |
| 51 | 124.40 | temperature | 20.0 | 90 | > th | dose dependent | rect. | 9 | 9 |
| 52 | 124.42 | temperature | 30.0 | 30 | < th | dose dependent | rect. | 7 | 16 |
| 56 | 124.47 | temperature | 15.0 | 90 | > th | dose dependent | rect. | 21 | 21 |
| 58 | 124.55 | radiation | 20.0 | 270 | < th | dose independent | rect. | 7 | 13 |
| 62 | 124.60 | temperature | 20.0 | 90 | > th | dose dependent | rect. | 11 | 7 |
| 66 | 124.68 | temperature | 30.0 | 90 | < th | dose independent | rect. | 17 | 19 |
| 67 | 124.69 | temperature | 15.0 | 270 | > th | dose dependent | rect. | 9 | 7 |
| 82 | 124.98 | temperature | 30.0 | 30 | < th | dose dependent | rect. | 9 | 14 |
| 96 | 125.25 | humidity | 70.0 | 270 | > th | dose independent | rect. | 17 | 2 |
| 101 | 125.34 | temperature | 30.0 | 90 | < th | dose independent | rect. | 17 | 6 |
| 102 | 125.36 | radiation | 10.0 | 720 | < th | dose dependent | rect. | 17 | 2 |
| 107 | 125.41 | temperature | 30.0 | 720 | < th | dose independent | rect. | 17 | 1 |
| 108 | 125.41 | temperature | 30.0 | 270 | < th | dose independent | rect. | 16 | 4 |
| 111 | 125.47 | wind | 5.0 | 30 | < th | dose independent | rect. | 23 | 8 |
| 130 | 125.74 | wind | 9.0 | 270 | < th | dose independent | rect. | 7 | 13 |
| 139 | 125.85 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 24 | 8 |
| 142 | 125.85 | temperature | 30.0 | 1440 | < th | dose independent | rect. | 24 | 8 |
| 146 | 125.85 | humidity | 50.0 | 1440 | > th | dose independent | rect. | 24 | 8 |
| 151 | 125.85 | atmosphere | 995.0 | 1440 | > th | dose independent | rect. | 24 | 8 |
| 153 | 125.85 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 8 | 16 |
| 156 | 125.85 | temperature | 25.0 | 30 | > th | dose dependent | rect. | 10 | 21 |
| 178 | 125.99 | precipitation | 0.1 | 30 | < th | dose independent | rect. | 23 | 8 |
| 179 | 125.99 | precipitation | 0.1 | 30 | < th | dose dependent | rect. | 23 | 8 |
| 184 | 126.03 | temperature | 30.0 | 30 | < th | dose independent | rect. | 9 | 14 |
| 188 | 126.04 | radiation | 1.0 | 90 | > th | dose independent | rect. | 9 | 22 |
| 192 | 126.09 | atmosphere | 995.0 | 30 | > th | dose dependent | rect. | 7 | 16 |
| 203 | 126.18 | temperature | 10.0 | 30 | > th | dose independent | rect. | 23 | 8 |
| 204 | 126.18 | temperature | 30.0 | 30 | < th | dose independent | rect. | 23 | 8 |
| 205 | 126.18 | humidity | 50.0 | 30 | > th | dose independent | rect. | 23 | 8 |
| 208 | 126.18 | atmosphere | 995.0 | 30 | > th | dose independent | rect. | 23 | 8 |
| 209 | 126.18 | radiation | 20.0 | 30 | < th | dose independent | rect. | 23 | 8 |
| 212 | 126.18 | temperature | 10.0 | 30 | > th | dose independent | rect. | 7 | 16 |
| 214 | 126.18 | atmosphere | 1015.0 | 30 | < th | dose independent | rect. | 7 | 16 |
| 249 | 126.57 | temperature | 10.0 | 720 | > th | dose dependent | rect. | 5 | 2 |
| 265 | 126.68 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 7 | 13 |
| 266 | 126.68 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 7 | 13 |
| 268 | 126.70 | wind | 7.0 | 30 | < th | dose independent | rect. | 12 | 19 |
| 274 | 126.81 | radiation | 10.0 | 720 | < th | dose independent | rect. | 16 | 3 |
| 277 | 126.83 | radiation | 20.0 | 30 | < th | dose independent | rect. | 23 | 10 |
| 301 | 126.92 | wind | 1.0 | 10 | > th | dose independent | rect. | 7 | 16 |
| 309 | 126.96 | temperature | 30.0 | 90 | < th | dose independent | rect. | 7 | 22 |
| 324 | 127.01 | radiation | 1.0 | 30 | < th | dose dependent | rect. | 17 | 6 |
| 348 | 127.12 | temperature | 30.0 | 90 | < th | dose dependent | rect. | 12 | 19 |
| 349 | 127.14 | temperature | 20.0 | 90 | > th | dose dependent | sin | 22 | NA |
| 354 | 127.16 | humidity | 60.0 | 90 | > th | dose independent | rect. | 17 | 6 |
| 361 | 127.19 | wind | 1.0 | 270 | > th | dose independent | rect. | 20 | 10 |
| 383 | 127.26 | humidity | 50.0 | 270 | > th | dose independent | rect. | 6 | 14 |
| 394 | 127.30 | temperature | 30.0 | 270 | < th | dose independent | rect. | 14 | 22 |
| 401 | 127.36 | humidity | 70.0 | 10 | > th | dose independent | rect. | 18 | 5 |
| 405 | 127.38 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 10 | 14 |
| 406 | 127.38 | temperature | 25.0 | 90 | > th | dose dependent | rect. | 10 | 16 |
| 413 | 127.41 | wind | 1.0 | 270 | > th | dose independent | rect. | 7 | 13 |
| 433 | 127.47 | precipitation | 0.1 | 10 | < th | dose independent | rect. | 7 | 16 |
| 438 | 127.47 | precipitation | 0.1 | 10 | < th | dose dependent | rect. | 7 | 16 |
| 453 | 127.55 | humidity | 50.0 | 90 | > th | dose dependent | rect. | 17 | 6 |
| 460 | 127.59 | wind | 9.0 | 30 | < th | dose independent | rect. | 7 | 16 |
| 473 | 127.66 | radiation | 1.0 | 30 | < th | dose independent | rect. | 17 | 6 |
| 489 | 127.71 | wind | 1.0 | 90 | > th | dose independent | rect. | 23 | 8 |
| 509 | 127.79 | humidity | 50.0 | 270 | > th | dose dependent | rect. | 17 | 3 |
| 543 | 127.90 | atmosphere | 1015.0 | 30 | < th | dose independent | rect. | 23 | 8 |
| 567 | 127.97 | radiation | 10.0 | 4320 | < th | dose dependent | rect. | 19 | 5 |
| 571 | 127.98 | radiation | 10.0 | 90 | < th | dose dependent | sin | 16 | NA |
| 607 | 128.08 | humidity | 60.0 | 30 | > th | dose independent | rect. | 7 | 16 |
| 614 | 128.09 | atmosphere | 1000.0 | 30 | > th | dose independent | rect. | 7 | 22 |
| 632 | 128.14 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 19 | 5 |
| 635 | 128.14 | temperature | 30.0 | 1440 | < th | dose independent | rect. | 19 | 5 |
| 639 | 128.14 | humidity | 50.0 | 1440 | > th | dose independent | rect. | 19 | 5 |
| 641 | 128.14 | atmosphere | 995.0 | 1440 | > th | dose independent | rect. | 19 | 5 |
| 642 | 128.14 | radiation | 1.0 | 1440 | < th | dose independent | rect. | 19 | 5 |
| 662 | 128.14 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 24 | 19 |
| 668 | 128.15 | radiation | 10.0 | 720 | < th | dose independent | rect. | 16 | 11 |
| 681 | 128.18 | wind | 9.0 | 1440 | < th | dose independent | rect. | 24 | 8 |
| 682 | 128.18 | atmosphere | 995.0 | 720 | > th | dose independent | rect. | 24 | 19 |
| 690 | 128.19 | radiation | 10.0 | 90 | < th | dose dependent | rect. | 10 | 13 |
| 769 | 128.45 | temperature | 25.0 | 90 | > th | dose independent | rect. | 11 | 7 |
| 777 | 128.47 | wind | 1.0 | 90 | > th | dose independent | rect. | 12 | 19 |
| 778 | 128.48 | radiation | 10.0 | 720 | < th | dose dependent | rect. | 17 | 10 |
| 789 | 128.52 | radiation | 40.0 | 10 | < th | dose dependent | rect. | 23 | 10 |
| 797 | 128.54 | radiation | 10.0 | 270 | < th | dose dependent | rect. | 16 | 4 |
| 811 | 128.57 | radiation | 40.0 | 270 | < th | dose dependent | rect. | 15 | 21 |
| 849 | 128.68 | temperature | 30.0 | 90 | < th | dose independent | rect. | 17 | 12 |
| 855 | 128.69 | radiation | 1.0 | 30 | < th | dose independent | sin | 15 | NA |
| 857 | 128.69 | precipitation | 0.1 | 30 | < th | dose independent | rect. | 12 | 19 |
| 863 | 128.69 | precipitation | 0.1 | 30 | < th | dose dependent | rect. | 12 | 19 |
| 890 | 128.77 | atmosphere | 1000.0 | 270 | > th | dose independent | rect. | 17 | 3 |
| 907 | 128.82 | humidity | 50.0 | 30 | > th | dose dependent | rect. | 7 | 16 |
| 908 | 128.82 | radiation | 40.0 | 270 | < th | dose dependent | rect. | 16 | 19 |
| 929 | 128.87 | temperature | 10.0 | 30 | > th | dose dependent | rect. | 23 | 23 |
| 941 | 128.92 | temperature | 30.0 | 90 | < th | dose independent | rect. | 7 | 5 |
| 947 | 128.93 | wind | 7.0 | 270 | < th | dose independent | rect. | 20 | 21 |
| 967 | 128.98 | atmosphere | 1000.0 | 30 | > th | dose independent | rect. | 7 | 5 |
| 976 | 128.99 | atmosphere | 995.0 | 10 | > th | dose dependent | rect. | 9 | 14 |
| 996 | 129.05 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 8 | 5 |
| 999 | 129.05 | atmosphere | 995.0 | 1440 | > th | dose independent | rect. | 8 | 5 |
| 1000 | 129.05 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 13 | 19 |