Os09g0477200
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Hypothetical protein.
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Os09g0477200 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = atmosphere,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 62.83 | 0.372 | 3.08 | 0.177 | 0.072 | 0.705 | 0.265 | 2.65 | -0.0589 | 11.3 | 1002 | 5705 | -- | -- |
| 65.2 | 0.376 | 3.1 | 0.0341 | 0.0612 | 0.91 | 0.271 | -- | -0.0494 | 11.6 | 999.2 | 11653 | -- | -- |
| 63.1 | 0.37 | 3.08 | 0.185 | 0.0749 | 0.7 | -- | 2.66 | -0.0585 | 10.5 | 1002 | 5711 | -- | -- |
| 65.44 | 0.377 | 3.1 | 0.0494 | 0.0721 | 0.912 | -- | -- | -0.046 | 9.37 | 999.1 | 11659 | -- | -- |
| 63.44 | 0.371 | 3.08 | 0.186 | -- | 0.704 | -- | 2.64 | -0.058 | -- | 1002 | 5716 | -- | -- |
| 86.51 | 0.436 | 3.12 | 0.222 | 0.0771 | -- | 0.251 | -- | -0.13 | 10.9 | -- | -- | -- | -- |
| 86.75 | 0.436 | 3.12 | 0.231 | 0.079 | -- | -- | -- | -0.13 | 9.96 | -- | -- | -- | -- |
| 65.74 | 0.378 | 3.1 | 0.0483 | -- | 0.912 | -- | -- | -0.0457 | -- | 999.1 | 11658 | -- | -- |
| 65.5 | 0.377 | 3.1 | -- | 0.0724 | 0.923 | -- | -- | -0.0497 | 9.26 | 999.2 | 11687 | -- | -- |
| 87.13 | 0.436 | 3.12 | 0.23 | -- | -- | -- | -- | -0.13 | -- | -- | -- | -- | -- |
| 88.16 | 0.439 | 3.12 | -- | 0.0783 | -- | -- | -- | -0.156 | 9.74 | -- | -- | -- | -- |
| 65.8 | 0.378 | 3.1 | -- | -- | 0.924 | -- | -- | -0.0493 | -- | 999.2 | 11687 | -- | -- |
| 88.52 | 0.439 | 3.13 | -- | -- | -- | -- | -- | -0.155 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 53.20 | humidity | 90 | 1440 | < th | dose dependent | rect. | 3 | 1 |
| 3 | 55.04 | humidity | 90 | 1440 | < th | dose dependent | rect. | 24 | 4 |
| 5 | 55.84 | humidity | 90 | 1440 | < th | dose dependent | rect. | 24 | 7 |
| 23 | 58.26 | humidity | 80 | 10 | < th | dose independent | rect. | 20 | 11 |
| 24 | 58.34 | temperature | 20 | 720 | < th | dose independent | rect. | 18 | 2 |
| 29 | 58.53 | humidity | 80 | 270 | < th | dose dependent | rect. | 1 | 2 |
| 31 | 58.55 | humidity | 80 | 270 | < th | dose independent | rect. | 1 | 2 |
| 34 | 58.58 | humidity | 80 | 270 | < th | dose dependent | rect. | 23 | 7 |
| 36 | 58.66 | humidity | 80 | 90 | < th | dose independent | rect. | 1 | 5 |
| 38 | 58.68 | humidity | 80 | 270 | < th | dose independent | rect. | 23 | 5 |
| 39 | 58.77 | humidity | 80 | 270 | < th | dose dependent | rect. | 21 | 9 |
| 48 | 58.96 | wind | 5 | 4320 | > th | dose dependent | rect. | 20 | 3 |
| 52 | 59.05 | humidity | 80 | 270 | < th | dose dependent | rect. | 24 | 4 |
| 64 | 59.37 | humidity | 80 | 10 | < th | dose independent | rect. | 24 | 7 |
| 82 | 59.69 | atmosphere | 995 | 14400 | < th | dose independent | rect. | 16 | 1 |
| 85 | 59.71 | atmosphere | 995 | 14400 | < th | dose dependent | rect. | 16 | 1 |
| 94 | 59.74 | atmosphere | 995 | 14400 | < th | dose independent | rect. | 18 | 1 |
| 97 | 59.74 | atmosphere | 995 | 14400 | < th | dose dependent | rect. | 18 | 1 |
| 122 | 59.90 | atmosphere | 995 | 14400 | > th | dose independent | rect. | 16 | 2 |
| 125 | 59.92 | humidity | 70 | 1440 | > th | dose dependent | rect. | 3 | 1 |
| 131 | 60.01 | humidity | 70 | 1440 | > th | dose dependent | rect. | 1 | 3 |
| 136 | 60.04 | wind | 7 | 4320 | < th | dose independent | rect. | 19 | 2 |
| 174 | 60.14 | wind | 5 | 4320 | > th | dose independent | rect. | 21 | 1 |
| 176 | 60.17 | atmosphere | 995 | 14400 | > th | dose independent | rect. | 13 | 6 |
| 199 | 60.21 | atmosphere | 995 | 14400 | > th | dose independent | rect. | 8 | 11 |
| 273 | 60.53 | humidity | 70 | 1440 | > th | dose dependent | rect. | 24 | 6 |
| 301 | 60.59 | humidity | 90 | 1440 | < th | dose dependent | rect. | 5 | 1 |
| 321 | 60.82 | wind | 7 | 4320 | > th | dose independent | rect. | 19 | 2 |
| 369 | 61.13 | wind | 7 | 4320 | < th | dose independent | rect. | 18 | 9 |
| 389 | 61.26 | wind | 9 | 4320 | > th | dose dependent | rect. | 20 | 8 |
| 426 | 61.41 | humidity | 90 | 1440 | < th | dose independent | rect. | 2 | 1 |
| 438 | 61.47 | wind | 9 | 4320 | > th | dose independent | rect. | 19 | 9 |
| 454 | 61.52 | humidity | 80 | 10 | < th | dose dependent | rect. | 2 | 5 |
| 467 | 61.59 | humidity | 90 | 1440 | < th | dose independent | rect. | 5 | 1 |
| 506 | 61.80 | temperature | 20 | 1440 | > th | dose independent | rect. | 18 | 1 |
| 508 | 61.81 | radiation | 20 | 1440 | > th | dose independent | rect. | 6 | 1 |
| 539 | 61.95 | humidity | 80 | 1440 | < th | dose independent | rect. | 22 | 3 |
| 560 | 62.03 | humidity | 80 | 1440 | > th | dose dependent | rect. | 5 | 1 |
| 562 | 62.03 | humidity | 80 | 10 | < th | dose dependent | rect. | 20 | 11 |
| 582 | 62.15 | humidity | 50 | 1440 | > th | dose dependent | rect. | 5 | 1 |
| 591 | 62.18 | humidity | 80 | 10 | < th | dose dependent | rect. | 24 | 7 |
| 630 | 62.43 | humidity | 80 | 1440 | > th | dose independent | rect. | 22 | 4 |
| 633 | 62.45 | humidity | 90 | 1440 | < th | dose independent | rect. | 1 | 5 |
| 676 | 62.62 | temperature | 20 | 720 | > th | dose independent | rect. | 13 | 8 |
| 729 | 62.83 | humidity | 90 | 1440 | > th | dose independent | rect. | 5 | 1 |
| 735 | 62.85 | atmosphere | 995 | 14400 | > th | dose independent | sin | 22 | NA |
| 736 | 62.85 | atmosphere | 995 | 14400 | < th | dose independent | sin | 22 | NA |
| 752 | 62.89 | atmosphere | 995 | 14400 | > th | dose independent | rect. | 19 | 21 |
| 754 | 62.89 | atmosphere | 995 | 14400 | < th | dose independent | rect. | 18 | 22 |
| 768 | 62.93 | atmosphere | 995 | 14400 | < th | dose dependent | sin | 0 | NA |
| 782 | 62.96 | atmosphere | 995 | 14400 | > th | dose independent | sin | 3 | NA |
| 793 | 62.98 | wind | 7 | 1440 | > th | dose independent | rect. | 8 | 1 |
| 817 | 63.03 | atmosphere | 995 | 14400 | < th | dose independent | sin | 3 | NA |