Os09g0476300
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os09g0476300 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = atmosphere,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 115.34 | 0.505 | 3.05 | 0.26 | 0.122 | 0.871 | 0.141 | 3.54 | 0.0989 | 10.8 | 1002 | 5980 | -- | -- |
| 126.89 | 0.525 | 3.08 | 0.174 | 0.121 | 1.2 | 0.142 | -- | 0.116 | 10.5 | 1002 | 6254 | -- | -- |
| 115.39 | 0.5 | 3.05 | 0.262 | 0.124 | 0.87 | -- | 3.53 | 0.0982 | 10.1 | 1002 | 5981 | -- | -- |
| 126.91 | 0.525 | 3.08 | 0.172 | 0.122 | 1.21 | -- | -- | 0.113 | 9.8 | 1002 | 6030 | -- | -- |
| 116.33 | 0.502 | 3.05 | 0.265 | -- | 0.872 | -- | 3.55 | 0.101 | -- | 1002 | 5975 | -- | -- |
| 156.03 | 0.586 | 3.1 | 0.311 | 0.128 | -- | 0.12 | -- | 0.00832 | 10.4 | -- | -- | -- | -- |
| 156.07 | 0.585 | 3.1 | 0.315 | 0.13 | -- | -- | -- | 0.00818 | 9.91 | -- | -- | -- | -- |
| 127.79 | 0.527 | 3.08 | 0.173 | -- | 1.21 | -- | -- | 0.114 | -- | 1001 | 5997 | -- | -- |
| 127.69 | 0.526 | 3.08 | -- | 0.121 | 1.24 | -- | -- | 0.101 | 9.73 | 1001 | 5997 | -- | -- |
| 157.08 | 0.586 | 3.11 | 0.314 | -- | -- | -- | -- | 0.00817 | -- | -- | -- | -- | -- |
| 158.68 | 0.589 | 3.11 | -- | 0.129 | -- | -- | -- | -0.0269 | 9.73 | -- | -- | -- | -- |
| 128.55 | 0.528 | 3.09 | -- | -- | 1.24 | -- | -- | 0.0969 | -- | 1001 | 5994 | -- | -- |
| 159.67 | 0.59 | 3.11 | -- | -- | -- | -- | -- | -0.0266 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 103.20 | humidity | 90 | 1440 | < th | dose dependent | rect. | 3 | 1 |
| 2 | 105.65 | wind | 5 | 4320 | > th | dose dependent | rect. | 20 | 3 |
| 9 | 106.84 | wind | 7 | 4320 | < th | dose independent | rect. | 18 | 4 |
| 18 | 107.53 | wind | 7 | 4320 | < th | dose independent | rect. | 18 | 9 |
| 19 | 107.59 | wind | 5 | 4320 | > th | dose independent | rect. | 21 | 1 |
| 24 | 107.78 | wind | 7 | 4320 | > th | dose independent | rect. | 18 | 4 |
| 27 | 108.04 | humidity | 90 | 1440 | < th | dose dependent | rect. | 2 | 5 |
| 29 | 108.07 | humidity | 90 | 1440 | < th | dose dependent | rect. | 24 | 7 |
| 44 | 108.88 | wind | 9 | 4320 | > th | dose dependent | rect. | 20 | 1 |
| 62 | 109.00 | wind | 7 | 4320 | > th | dose independent | rect. | 18 | 9 |
| 170 | 111.41 | atmosphere | 995 | 14400 | < th | dose independent | rect. | 16 | 2 |
| 171 | 111.41 | atmosphere | 995 | 14400 | < th | dose dependent | rect. | 16 | 1 |
| 172 | 111.42 | atmosphere | 995 | 14400 | < th | dose independent | rect. | 18 | 1 |
| 178 | 111.42 | atmosphere | 995 | 14400 | < th | dose dependent | rect. | 18 | 1 |
| 198 | 111.69 | atmosphere | 995 | 14400 | > th | dose independent | rect. | 16 | 5 |
| 205 | 111.86 | wind | 7 | 1440 | > th | dose independent | rect. | 8 | 1 |
| 206 | 111.87 | atmosphere | 995 | 14400 | > th | dose independent | rect. | 16 | 1 |
| 273 | 112.69 | wind | 7 | 1440 | < th | dose independent | rect. | 8 | 1 |
| 275 | 112.72 | atmosphere | 995 | 14400 | > th | dose independent | rect. | 7 | 14 |
| 277 | 112.74 | atmosphere | 995 | 14400 | > th | dose independent | rect. | 11 | 10 |
| 300 | 112.91 | humidity | 90 | 1440 | < th | dose dependent | rect. | 5 | 1 |
| 357 | 113.32 | humidity | 80 | 1440 | < th | dose independent | rect. | 22 | 1 |
| 371 | 113.72 | humidity | 70 | 1440 | > th | dose dependent | rect. | 1 | 6 |
| 397 | 114.07 | humidity | 70 | 1440 | > th | dose dependent | rect. | 3 | 1 |
| 423 | 114.45 | temperature | 20 | 720 | < th | dose independent | rect. | 18 | 2 |
| 524 | 115.53 | atmosphere | 995 | 14400 | > th | dose independent | rect. | 24 | 16 |
| 567 | 115.69 | atmosphere | 995 | 14400 | < th | dose dependent | sin | 0 | NA |
| 568 | 115.70 | atmosphere | 995 | 14400 | < th | dose independent | sin | 22 | NA |
| 570 | 115.71 | atmosphere | 995 | 14400 | > th | dose independent | sin | 22 | NA |
| 582 | 115.78 | atmosphere | 995 | 14400 | > th | dose independent | sin | 4 | NA |
| 632 | 115.90 | atmosphere | 995 | 14400 | < th | dose independent | sin | 3 | NA |
| 651 | 115.93 | wind | 5 | 1440 | > th | dose dependent | rect. | 8 | 1 |
| 693 | 116.03 | humidity | 50 | 1440 | > th | dose dependent | rect. | 5 | 1 |
| 804 | 116.33 | wind | 7 | 1440 | > th | dose independent | rect. | 1 | 8 |
| 815 | 116.34 | humidity | 80 | 10 | < th | dose independent | rect. | 20 | 11 |
| 834 | 116.35 | humidity | 80 | 1440 | > th | dose independent | rect. | 22 | 4 |
| 870 | 116.36 | atmosphere | 995 | 14400 | > th | dose independent | rect. | 12 | 23 |
| 875 | 116.37 | atmosphere | 995 | 14400 | > th | dose independent | no | NA | NA |
| 888 | 116.37 | atmosphere | 995 | 14400 | > th | dose independent | rect. | 14 | 23 |
| 950 | 116.46 | radiation | 20 | 1440 | > th | dose independent | rect. | 6 | 1 |