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Os09g0472200

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Similar to ABC transporter.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 7.76 (0.0566) R2 : 0.664
β1 : 1.74 (0.294) R2dD : 0.0797 R2D : 0.0766
β2 : 1.81 (0.119) R2dC : 0.191 R2C : 0.0332
β3 : 3.12 (0.207) R2dE : 0.306 R2E : -0.484
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : 7.78 (0.809) R2dD*E : 0.222 R2D*E : 0.236
γ1 : 2.18 (0.139) R2dN8 : 0.482 R2N8 : 0.0798
σ : 0.855
deviance : 337.24
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C
peak time of C : 20.9
E
wheather : radiation
threshold : 1.41
memory length : 19805
response mode : < th
dose dependency : dose independent
G
type of G : no
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = radiation, response mode = < th, dose dependency = dose independent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
338.29 0.864 7.76 1.61 1.29 2.92 -2.15 7.51 2.1 20.7 1.29 18768 -- --
427.33 0.963 7.7 2.65 1.17 2.34 -2.34 -- 2.03 20.5 2.19 17470 -- --
337.24 0.855 7.76 1.74 1.81 3.12 -- 7.78 2.18 20.9 1.41 19805 -- --
393.8 0.924 7.68 3.43 1.44 2.27 -- -- 2.42 20.4 2.22 26088 -- --
445.82 0.983 7.73 1.79 -- 3.16 -- 8.02 2.19 -- 1.082 21715 -- --
558.99 1.11 7.69 2.54 1.34 -- -2.01 -- 1.68 20.5 -- -- -- --
571.9 1.12 7.69 2.6 1.35 -- -- -- 1.68 20.4 -- -- -- --
489.69 1.03 7.67 3.46 -- 2.54 -- -- 2.46 -- 2.05 26087 -- --
599.41 1.14 7.61 -- 1.4 2.15 -- -- 2.07 20.5 36.64 24274 -- --
673.16 1.21 7.66 2.59 -- -- -- -- 1.67 -- -- -- -- --
750.12 1.28 7.76 -- 1.34 -- -- -- 1.39 20.6 -- -- -- --
704.32 1.24 7.58 -- -- 2.04 -- -- 2.03 -- 36.52 23036 -- --
850.58 1.36 7.72 -- -- -- -- -- 1.38 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 341.30 temperature 25 14400 > th dose dependent rect. 6 1
2 342.85 temperature 30 14400 < th dose independent rect. 9 1
3 343.55 radiation 10 14400 > th dose independent rect. 17 14
4 343.63 temperature 30 14400 > th dose independent rect. 9 1
5 343.90 temperature 30 14400 < th dose independent rect. 1 9
10 344.10 temperature 30 14400 < th dose independent rect. 19 15
13 344.17 temperature 30 14400 < th dose independent rect. 21 13
20 345.05 radiation 10 14400 < th dose dependent rect. 6 1
35 345.25 radiation 20 14400 > th dose dependent rect. 8 1
36 345.28 temperature 25 14400 > th dose independent rect. 6 1
38 345.95 radiation 10 14400 > th dose independent rect. 6 1
40 346.28 radiation 20 14400 > th dose independent rect. 16 17
41 346.35 radiation 10 14400 < th dose dependent rect. 18 22
55 346.43 radiation 40 14400 < th dose dependent rect. 8 1
56 346.44 radiation 10 14400 > th dose independent sin 12 NA
58 346.73 temperature 30 14400 > th dose dependent rect. 9 1
59 346.74 radiation 30 14400 > th dose independent rect. 8 1
60 346.89 radiation 10 14400 < th dose dependent rect. 3 13
62 346.90 radiation 10 14400 < th dose dependent rect. 1 15
68 346.92 radiation 10 14400 < th dose dependent rect. 21 19
78 347.13 radiation 30 14400 < th dose dependent rect. 17 17
79 347.15 radiation 10 14400 < th dose dependent sin 4 NA
80 347.18 radiation 10 14400 < th dose dependent rect. 3 4
81 347.20 radiation 10 14400 < th dose dependent rect. 1 6
85 347.23 radiation 10 14400 < th dose dependent rect. 19 12
109 347.56 temperature 25 14400 < th dose independent rect. 6 1
110 347.56 radiation 1 14400 < th dose independent rect. 17 13
111 347.56 radiation 40 14400 > th dose dependent rect. 12 23
112 347.60 radiation 20 14400 < th dose dependent sin 10 NA
128 347.66 humidity 80 43200 > th dose independent rect. 11 7
131 347.73 radiation 20 14400 < th dose dependent rect. 13 21
151 347.91 radiation 1 14400 < th dose independent rect. 17 1
156 348.03 humidity 80 43200 > th dose independent rect. 16 1
164 348.06 radiation 10 14400 < th dose dependent rect. 10 23
183 348.12 humidity 80 43200 > th dose dependent rect. 17 1
187 348.14 radiation 10 14400 < th dose dependent rect. 15 23
189 348.16 radiation 10 14400 < th dose dependent rect. 3 18
203 348.17 radiation 10 14400 < th dose dependent rect. 3 23
205 348.18 radiation 10 14400 < th dose dependent no NA NA
223 348.18 radiation 10 14400 < th dose dependent rect. 13 23
261 348.39 radiation 30 14400 < th dose independent rect. 8 1
274 348.57 radiation 30 14400 < th dose dependent rect. 3 7
279 348.59 radiation 30 14400 < th dose dependent rect. 1 9
326 348.83 humidity 90 43200 < th dose independent rect. 12 10
339 348.91 radiation 1 14400 > th dose dependent rect. 17 17
341 348.93 humidity 90 43200 < th dose independent rect. 10 12
349 349.00 humidity 90 43200 < th dose independent rect. 15 7
393 349.28 radiation 1 14400 < th dose independent rect. 17 4
407 349.33 radiation 1 14400 < th dose independent rect. 17 9
463 349.51 radiation 1 14400 > th dose dependent rect. 4 6
473 349.52 humidity 80 43200 < th dose independent rect. 11 6
490 349.62 humidity 90 43200 > th dose dependent rect. 20 2
494 349.67 radiation 1 14400 < th dose independent sin 13 NA
496 349.68 radiation 40 14400 > th dose dependent rect. 12 4
513 349.69 radiation 40 14400 > th dose dependent sin 18 NA
541 349.83 humidity 80 43200 > th dose dependent rect. 16 3
549 349.88 radiation 40 14400 > th dose dependent rect. 9 7
578 349.96 radiation 40 14400 > th dose independent rect. 14 20
584 350.01 humidity 80 43200 < th dose independent rect. 12 3
592 350.07 radiation 1 14400 > th dose dependent sin 11 NA
594 350.09 radiation 1 14400 < th dose dependent rect. 17 1
613 350.15 temperature 30 14400 < th dose independent sin 8 NA
707 350.27 radiation 40 14400 > th dose dependent no NA NA
868 350.34 temperature 30 14400 > th dose independent sin 8 NA
939 350.45 temperature 30 14400 < th dose independent rect. 17 17
988 350.58 radiation 1 14400 < th dose independent rect. 5 13
989 350.58 radiation 1 14400 < th dose independent rect. 3 15
990 350.58 radiation 1 14400 < th dose independent rect. 1 17
996 350.59 temperature 30 14400 > th dose dependent rect. 12 1