Os09g0471600
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Protein kinase-like domain containing protein.
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Os09g0471600 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Protein kinase-like domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = precipitation,
response mode = > th, dose dependency = dose independent, type of G = rect.)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 124.91 | 0.525 | 3.17 | -0.748 | 0.432 | 17.7 | -1.09 | -62.2 | -0.0192 | 4.28 | 1 | 4 | 2 | 2 |
| -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- |
| -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- |
| -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- |
| -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- |
| 179.15 | 0.627 | 3.1 | -0.51 | 0.583 | -- | -2.02 | -- | -0.0975 | 4.71 | -- | -- | -- | -- |
| 189.71 | 0.645 | 3.09 | -0.501 | 0.568 | -- | -- | -- | -0.0873 | 4.4 | -- | -- | -- | -- |
| -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- |
| -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- |
| 207.04 | 0.672 | 3.09 | -0.479 | -- | -- | -- | -- | -0.0723 | -- | -- | -- | -- | -- |
| 196.32 | 0.655 | 3.08 | -- | 0.559 | -- | -- | -- | -0.0315 | 4.42 | -- | -- | -- | -- |
| -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- |
| 213.08 | 0.681 | 3.08 | -- | -- | -- | -- | -- | -0.0192 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 124.91 | precipitation | 0.1 | 270 | > th | dose independent | rect. | 2 | 2 |
| 2 | 124.92 | precipitation | 0.1 | 270 | > th | dose dependent | rect. | 2 | 2 |
| 5 | 132.86 | radiation | 1.0 | 1440 | < th | dose independent | rect. | 11 | 1 |
| 6 | 132.86 | radiation | 1.0 | 1440 | < th | dose dependent | rect. | 11 | 1 |
| 11 | 136.26 | temperature | 20.0 | 90 | > th | dose independent | rect. | 1 | 5 |
| 14 | 138.39 | temperature | 20.0 | 270 | > th | dose independent | rect. | 23 | 7 |
| 15 | 139.18 | temperature | 20.0 | 10 | > th | dose independent | rect. | 2 | 4 |
| 19 | 139.93 | wind | 1.0 | 270 | < th | dose independent | rect. | 3 | 1 |
| 23 | 140.75 | wind | 1.0 | 270 | < th | dose independent | rect. | 23 | 5 |
| 31 | 142.84 | humidity | 90.0 | 30 | > th | dose independent | rect. | 24 | 8 |
| 48 | 144.29 | radiation | 1.0 | 1440 | > th | dose independent | rect. | 11 | 4 |
| 49 | 144.31 | radiation | 1.0 | 1440 | < th | dose independent | rect. | 13 | 2 |
| 50 | 144.31 | radiation | 1.0 | 1440 | < th | dose dependent | rect. | 13 | 2 |
| 51 | 144.42 | radiation | 1.0 | 1440 | < th | dose independent | rect. | 11 | 4 |
| 53 | 144.42 | radiation | 1.0 | 1440 | < th | dose dependent | rect. | 11 | 4 |
| 126 | 146.62 | wind | 1.0 | 720 | < th | dose independent | rect. | 23 | 1 |
| 127 | 146.67 | wind | 1.0 | 1440 | > th | dose independent | rect. | 23 | 1 |
| 139 | 147.20 | atmosphere | 1005.0 | 720 | > th | dose independent | rect. | 19 | 6 |
| 149 | 147.42 | wind | 1.0 | 270 | < th | dose independent | rect. | 1 | 1 |
| 174 | 148.48 | wind | 1.0 | 270 | < th | dose dependent | rect. | 24 | 2 |
| 187 | 148.88 | wind | 1.0 | 270 | > th | dose independent | sin | 14 | NA |
| 195 | 149.06 | humidity | 80.0 | 10 | > th | dose dependent | rect. | 1 | 10 |
| 219 | 149.43 | humidity | 90.0 | 30 | > th | dose independent | sin | 7 | NA |
| 225 | 149.48 | atmosphere | 1005.0 | 720 | < th | dose independent | rect. | 21 | 2 |
| 250 | 149.97 | atmosphere | 1005.0 | 720 | < th | dose independent | rect. | 19 | 6 |
| 252 | 150.03 | atmosphere | 1010.0 | 90 | < th | dose dependent | rect. | 1 | 8 |
| 257 | 150.12 | atmosphere | 1010.0 | 270 | < th | dose dependent | rect. | 23 | 7 |
| 266 | 150.39 | humidity | 90.0 | 10 | < th | dose independent | sin | 6 | NA |
| 288 | 150.79 | atmosphere | 1005.0 | 10 | < th | dose dependent | rect. | 1 | 7 |
| 295 | 150.89 | wind | 1.0 | 270 | < th | dose dependent | rect. | 23 | 5 |
| 300 | 150.94 | atmosphere | 1010.0 | 90 | < th | dose dependent | rect. | 1 | 6 |
| 387 | 151.28 | wind | 1.0 | 270 | < th | dose dependent | rect. | 3 | 1 |
| 391 | 151.37 | radiation | 20.0 | 1440 | < th | dose dependent | rect. | 11 | 2 |
| 393 | 151.40 | radiation | 20.0 | 1440 | < th | dose independent | rect. | 11 | 2 |
| 407 | 151.81 | wind | 1.0 | 270 | < th | dose independent | sin | 15 | NA |
| 484 | 152.89 | wind | 7.0 | 4320 | > th | dose independent | rect. | 17 | 2 |
| 485 | 152.90 | humidity | 90.0 | 720 | > th | dose dependent | rect. | 20 | 1 |
| 496 | 153.09 | wind | 1.0 | 270 | < th | dose dependent | rect. | 15 | 13 |
| 548 | 153.61 | radiation | 20.0 | 1440 | < th | dose dependent | rect. | 11 | 4 |
| 586 | 154.00 | wind | 7.0 | 4320 | > th | dose dependent | rect. | 17 | 1 |
| 599 | 154.22 | humidity | 80.0 | 30 | > th | dose dependent | sin | 7 | NA |
| 611 | 154.31 | wind | 7.0 | 4320 | < th | dose independent | rect. | 17 | 3 |
| 651 | 154.58 | radiation | 1.0 | 1440 | > th | dose independent | rect. | 9 | 1 |
| 664 | 154.72 | humidity | 90.0 | 10 | < th | dose independent | rect. | 23 | 13 |
| 665 | 154.73 | temperature | 15.0 | 90 | > th | dose dependent | rect. | 1 | 5 |
| 681 | 155.00 | wind | 1.0 | 270 | > th | dose independent | rect. | 3 | 23 |
| 696 | 155.11 | temperature | 20.0 | 90 | > th | dose independent | rect. | 13 | 17 |
| 699 | 155.12 | humidity | 90.0 | 30 | > th | dose independent | rect. | 22 | 11 |
| 722 | 155.29 | wind | 1.0 | 270 | > th | dose independent | rect. | 19 | 14 |
| 726 | 155.32 | humidity | 60.0 | 14400 | > th | dose independent | rect. | 7 | 1 |
| 729 | 155.35 | precipitation | 0.1 | 30 | < th | dose independent | sin | 2 | NA |
| 731 | 155.35 | precipitation | 0.1 | 30 | < th | dose dependent | sin | 2 | NA |
| 734 | 155.37 | temperature | 20.0 | 10 | > th | dose independent | rect. | 14 | 16 |
| 761 | 155.52 | precipitation | 0.1 | 30 | > th | dose independent | sin | 2 | NA |
| 762 | 155.52 | temperature | 20.0 | 270 | < th | dose independent | rect. | 21 | 12 |
| 772 | 155.61 | temperature | 20.0 | 720 | > th | dose independent | rect. | 18 | 10 |
| 773 | 155.61 | temperature | 20.0 | 10 | > th | dose independent | rect. | 12 | 18 |
| 779 | 155.62 | precipitation | 0.1 | 30 | > th | dose dependent | sin | 2 | NA |
| 810 | 155.76 | humidity | 90.0 | 30 | > th | dose independent | rect. | 20 | 13 |
| 820 | 155.78 | temperature | 20.0 | 270 | > th | dose independent | sin | 9 | NA |
| 850 | 155.86 | humidity | 90.0 | 720 | > th | dose dependent | rect. | 20 | 3 |
| 880 | 156.02 | temperature | 15.0 | 270 | > th | dose dependent | rect. | 1 | 2 |
| 895 | 156.10 | humidity | 70.0 | 14400 | < th | dose dependent | rect. | 21 | 1 |
| 916 | 156.18 | temperature | 15.0 | 10 | > th | dose dependent | rect. | 2 | 4 |
| 971 | 156.46 | precipitation | 0.1 | 90 | > th | dose independent | sin | 7 | NA |
| 972 | 156.46 | precipitation | 0.1 | 90 | < th | dose independent | sin | 7 | NA |
| 976 | 156.46 | precipitation | 0.1 | 90 | < th | dose dependent | sin | 7 | NA |
| 995 | 156.57 | temperature | 20.0 | 270 | < th | dose independent | sin | 10 | NA |
| 996 | 156.57 | wind | 7.0 | 4320 | > th | dose independent | rect. | 15 | 13 |