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Os09g0471100

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Similar to Peroxidase 17 precursor (EC 1.11.1.7) (Atperox P17) (ATP25a).


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 14 (0.0311) R2 : 0.622
β1 : -- (--) R2dD : -- R2D : --
β2 : 2.01 (0.08) R2dC : 0.552 R2C : 0.44
β3 : -1.16 (0.12) R2dE : 0.0826 R2E : 0.00833
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.572 (0.0656) R2dN8 : 0.0824 R2N8 : 0.0733
σ : 0.582
deviance : 155.92
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_____
C
peak time of C : 20.4
E
wheather : humidity
threshold : 77.42
memory length : 1144
response mode : < th
dose dependency : dose dependent
G
type of G : no
peak or start time of G : --
open length of G : --

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Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = humidity, response mode = < th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
151.62 0.579 14 0.187 2.05 -1.19 1.04 -0.717 0.588 20.5 78.58 1119 -- --
152.08 0.574 14 0.232 2.04 -1.24 0.906 -- 0.578 20.5 76.59 1132 -- --
154.67 0.579 14 0.197 2.02 -1.18 -- -0.254 0.587 20.4 77.35 1150 -- --
154.76 0.579 14 0.212 2.02 -1.2 -- -- 0.585 20.4 76.86 1144 -- --
353.61 0.876 13.9 0.0506 -- -1.04 -- -0.995 0.599 -- 81.47 2881 -- --
183.84 0.636 14 0.0235 1.89 -- 0.744 -- 0.652 20 -- -- -- --
185.49 0.638 14 0.0032 1.89 -- -- -- 0.653 20 -- -- -- --
355.25 0.878 13.9 0.0594 -- -1.12 -- -- 0.608 -- 83.02 2887 -- --
155.92 0.582 14 -- 2.01 -1.16 -- -- 0.572 20.4 77.42 1144 -- --
380.61 0.912 13.9 -0.0155 -- -- -- -- 0.629 -- -- -- -- --
185.49 0.637 14 -- 1.89 -- -- -- 0.653 20 -- -- -- --
355.38 0.878 13.9 -- -- -1.11 -- -- 0.6 -- 83 2881 -- --
380.61 0.911 13.9 -- -- -- -- -- 0.631 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 150.53 wind 9.0 43200 < th dose independent rect. 9 5
5 150.80 wind 9.0 43200 < th dose independent rect. 5 9
9 151.20 wind 9.0 43200 < th dose independent rect. 1 13
11 151.37 wind 9.0 43200 > th dose independent rect. 9 5
14 151.59 wind 9.0 43200 < th dose independent rect. 21 17
19 151.73 humidity 70.0 720 < th dose independent rect. 15 18
20 151.75 wind 9.0 43200 > th dose independent rect. 20 18
21 151.83 wind 9.0 43200 > th dose independent rect. 20 20
23 151.85 humidity 80.0 720 < th dose dependent rect. 15 18
27 151.90 wind 9.0 43200 < th dose independent rect. 21 19
31 151.93 humidity 80.0 720 < th dose dependent rect. 15 7
34 151.96 wind 7.0 43200 > th dose dependent rect. 10 4
46 152.04 wind 9.0 43200 < th dose independent sin 3 NA
51 152.06 wind 9.0 43200 > th dose independent rect. 1 13
116 152.47 wind 9.0 43200 > th dose independent sin 3 NA
119 152.50 humidity 70.0 720 < th dose independent rect. 15 5
134 152.53 wind 9.0 43200 > th dose dependent rect. 12 1
170 152.79 humidity 50.0 270 > th dose independent rect. 9 17
186 152.86 humidity 80.0 720 < th dose dependent sin 14 NA
192 152.93 humidity 70.0 720 < th dose independent sin 12 NA
244 153.22 humidity 70.0 720 > th dose independent rect. 15 15
247 153.27 temperature 30.0 720 < th dose independent rect. 16 7
249 153.28 wind 9.0 43200 > th dose dependent rect. 10 8
258 153.35 wind 3.0 43200 > th dose independent rect. 20 12
259 153.36 precipitation 0.1 270 < th dose independent rect. 15 16
260 153.36 precipitation 0.1 270 < th dose dependent rect. 15 16
262 153.37 wind 9.0 43200 < th dose independent rect. 15 23
267 153.47 wind 7.0 43200 > th dose dependent rect. 1 15
268 153.47 wind 7.0 43200 > th dose dependent rect. 21 19
270 153.50 precipitation 0.1 270 < th dose independent rect. 3 16
271 153.50 precipitation 0.1 270 < th dose dependent rect. 3 16
278 153.54 wind 9.0 43200 < th dose independent rect. 3 20
281 153.55 wind 9.0 43200 < th dose independent rect. 1 22
287 153.57 humidity 50.0 270 > th dose independent rect. 10 15
296 153.62 humidity 70.0 720 > th dose independent rect. 15 8
310 153.66 wind 9.0 43200 < th dose independent no NA NA
312 153.66 wind 9.0 43200 < th dose independent rect. 10 23
318 153.68 wind 3.0 43200 < th dose independent rect. 20 12
326 153.69 wind 9.0 43200 < th dose independent rect. 7 23
336 153.73 radiation 1.0 270 > th dose independent rect. 15 15
339 153.73 wind 9.0 43200 > th dose independent rect. 9 23
347 153.75 wind 9.0 43200 > th dose independent no NA NA
351 153.75 wind 9.0 43200 > th dose independent rect. 1 23
352 153.75 wind 9.0 43200 > th dose independent rect. 3 23
356 153.76 wind 9.0 43200 > th dose independent rect. 7 23
360 153.76 wind 7.0 43200 > th dose dependent sin 3 NA
361 153.77 wind 9.0 43200 > th dose independent rect. 3 21
380 153.80 wind 3.0 43200 > th dose independent rect. 1 13
388 153.81 humidity 70.0 720 > th dose independent sin 13 NA
401 153.83 wind 3.0 43200 > th dose independent rect. 5 2
446 153.93 wind 9.0 43200 > th dose independent rect. 15 23
472 153.98 wind 9.0 43200 < th dose dependent rect. 20 11
493 154.04 wind 3.0 43200 > th dose independent sin 7 NA
514 154.08 temperature 20.0 270 > th dose independent rect. 19 7
545 154.13 wind 1.0 43200 > th dose dependent rect. 20 11
566 154.20 wind 9.0 43200 < th dose independent rect. 12 23
569 154.21 wind 3.0 43200 < th dose independent rect. 5 2
590 154.25 wind 3.0 43200 < th dose independent rect. 1 13
607 154.29 wind 3.0 43200 > th dose independent rect. 21 16
615 154.30 humidity 50.0 4320 > th dose independent rect. 15 20
616 154.31 wind 3.0 43200 > th dose independent rect. 23 8
628 154.35 wind 9.0 43200 < th dose dependent rect. 22 16
637 154.37 wind 9.0 43200 < th dose dependent rect. 5 2
643 154.38 wind 3.0 43200 < th dose independent sin 7 NA
648 154.39 wind 1.0 43200 > th dose dependent rect. 5 2
652 154.40 temperature 15.0 270 > th dose dependent rect. 15 4
661 154.42 wind 3.0 43200 > th dose independent rect. 1 6
688 154.48 humidity 50.0 4320 > th dose independent sin 11 NA
691 154.48 humidity 50.0 270 > th dose dependent rect. 18 9
709 154.52 wind 1.0 43200 > th dose dependent rect. 23 16
712 154.53 wind 3.0 43200 < th dose independent rect. 1 6
719 154.53 wind 1.0 43200 > th dose dependent rect. 1 14
740 154.58 wind 3.0 43200 < th dose independent rect. 21 16
755 154.61 temperature 30.0 720 < th dose independent rect. 16 15
765 154.63 wind 9.0 43200 < th dose dependent rect. 1 14
787 154.67 wind 9.0 43200 > th dose dependent rect. 10 20
788 154.67 wind 7.0 43200 > th dose dependent rect. 15 23
814 154.73 temperature 30.0 720 < th dose independent sin 13 NA
828 154.75 wind 9.0 43200 > th dose independent rect. 14 2
829 154.75 temperature 20.0 90 > th dose independent rect. 21 7
852 154.81 wind 9.0 43200 < th dose dependent sin 5 NA
857 154.82 wind 1.0 43200 > th dose dependent sin 5 NA
873 154.84 wind 5.0 14400 < th dose dependent rect. 3 2
878 154.86 wind 9.0 43200 < th dose dependent sin 9 NA
899 154.91 precipitation 0.1 14400 > th dose independent rect. 8 9
911 154.93 wind 5.0 43200 < th dose dependent rect. 1 13
932 154.98 temperature 30.0 720 > th dose independent sin 13 NA
940 155.00 precipitation 0.1 14400 > th dose independent rect. 6 11
942 155.00 wind 1.0 43200 > th dose dependent sin 9 NA
949 155.01 wind 5.0 43200 < th dose dependent sin 7 NA
952 155.01 temperature 10.0 270 > th dose dependent rect. 14 6
989 155.09 wind 9.0 43200 > th dose dependent rect. 10 16
992 155.10 precipitation 0.1 14400 < th dose independent rect. 8 9
996 155.10 precipitation 0.1 14400 < th dose dependent rect. 8 9