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Os09g0470900

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Conserved hypothetical protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 10.5 (0.0167) R2 : 0.616
β1 : -- (--) R2dD : -- R2D : --
β2 : 1.09 (0.041) R2dC : 0.597 R2C : 0.597
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.147 (0.0353) R2dN8 : 0.0189 R2N8 : 0.0188
σ : 0.316
deviance : 45.62
__
_____
C
peak time of C : 2.26
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = humidity, response mode = > th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
33.15 0.271 10.4 0.51 0.909 0.46 0.304 -0.732 0.301 1.89 90.08 83 -- --
33.74 0.271 10.4 0.461 0.896 0.486 0.0225 -- 0.289 1.69 89.6 186 -- --
33.36 0.269 10.4 0.497 0.9 0.448 -- -0.459 0.305 1.92 89.37 79 -- --
33.74 0.271 10.4 0.46 0.896 0.486 -- -- 0.288 1.69 89.59 190 -- --
50.1 0.331 10.4 0.522 -- 0.966 -- -0.129 0.31 -- 70.18 23 -- --
38.6 0.291 10.4 0.517 1.08 -- 0.17 -- 0.205 2.23 -- -- -- --
38.71 0.291 10.4 0.512 1.08 -- -- -- 0.204 2.25 -- -- -- --
50.04 0.329 10.4 0.515 -- 0.964 -- -- 0.308 -- 70.3 2 -- --
39.27 0.292 10.4 -- 0.897 0.521 -- -- 0.263 1.6 89.24 192 -- --
108.16 0.486 10.4 0.557 -- -- -- -- 0.23 -- -- -- -- --
45.62 0.316 10.5 -- 1.09 -- -- -- 0.147 2.26 -- -- -- --
57 0.352 10.4 -- -- 0.97 -- -- 0.256 -- 71.09 2 -- --
116.36 0.504 10.4 -- -- -- -- -- 0.168 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 32.37 radiation 1.0 720 < th dose dependent rect. 24 21
2 32.39 radiation 1.0 720 < th dose dependent rect. 24 19
3 32.68 humidity 90.0 90 > th dose dependent rect. 24 23
4 32.71 humidity 90.0 270 > th dose dependent rect. 7 22
6 32.72 radiation 1.0 720 < th dose dependent rect. 24 23
9 32.74 temperature 30.0 270 < th dose dependent rect. 24 19
13 32.85 humidity 90.0 720 > th dose dependent rect. 20 1
19 32.97 temperature 30.0 270 < th dose dependent rect. 24 15
28 33.03 temperature 30.0 90 < th dose dependent rect. 1 21
30 33.05 temperature 25.0 270 < th dose independent rect. 24 15
31 33.05 radiation 1.0 720 < th dose independent rect. 24 21
33 33.07 radiation 1.0 720 > th dose independent rect. 12 19
34 33.07 radiation 1.0 720 < th dose independent rect. 24 19
39 33.07 temperature 30.0 30 < th dose dependent rect. 24 23
49 33.11 radiation 1.0 720 > th dose independent rect. 12 21
61 33.17 humidity 90.0 90 > th dose dependent rect. 14 22
64 33.18 humidity 90.0 90 > th dose dependent no NA NA
68 33.19 humidity 90.0 270 > th dose dependent sin 15 NA
72 33.20 humidity 90.0 90 > th dose dependent rect. 17 23
75 33.22 humidity 90.0 90 > th dose independent rect. 24 23
84 33.23 humidity 90.0 90 > th dose dependent rect. 19 23
86 33.25 temperature 25.0 270 < th dose independent rect. 24 19
87 33.25 precipitation 0.1 720 < th dose independent rect. 12 23
88 33.25 precipitation 0.1 720 < th dose dependent rect. 12 23
108 33.32 humidity 90.0 270 > th dose dependent rect. 13 15
124 33.35 humidity 90.0 90 > th dose dependent rect. 3 23
131 33.38 precipitation 0.1 720 < th dose independent rect. 12 15
132 33.38 precipitation 0.1 720 < th dose dependent rect. 12 15
143 33.41 radiation 1.0 1440 < th dose dependent rect. 10 8
147 33.42 radiation 1.0 720 > th dose independent rect. 12 5
151 33.42 humidity 90.0 270 > th dose dependent rect. 17 11
181 33.48 humidity 90.0 30 < th dose independent rect. 23 21
226 33.56 radiation 1.0 720 < th dose dependent rect. 5 23
246 33.59 radiation 1.0 720 < th dose dependent rect. 20 23
250 33.60 radiation 1.0 720 < th dose dependent rect. 14 19
272 33.63 radiation 1.0 720 < th dose dependent rect. 14 17
286 33.64 humidity 50.0 270 > th dose dependent rect. 17 12
302 33.66 radiation 1.0 720 < th dose independent rect. 24 17
316 33.67 temperature 10.0 270 > th dose dependent rect. 5 19
335 33.69 precipitation 0.1 720 < th dose independent rect. 6 18
338 33.69 temperature 15.0 30 > th dose dependent rect. 6 14
339 33.69 precipitation 0.1 720 < th dose dependent rect. 6 18
354 33.71 humidity 80.0 1440 > th dose independent rect. 11 9
381 33.73 radiation 1.0 720 > th dose independent rect. 12 7
383 33.73 humidity 80.0 1440 < th dose independent rect. 11 9
385 33.73 precipitation 0.1 720 < th dose independent rect. 15 9
393 33.73 radiation 10.0 720 < th dose dependent rect. 14 7
394 33.73 precipitation 0.1 720 < th dose dependent rect. 15 9
399 33.73 radiation 1.0 720 < th dose dependent rect. 7 23
401 33.74 humidity 80.0 720 < th dose independent rect. 12 5
402 33.74 humidity 90.0 90 > th dose dependent sin 9 NA
427 33.75 humidity 70.0 30 > th dose dependent rect. 15 15
452 33.77 humidity 90.0 30 < th dose independent rect. 21 23
474 33.80 humidity 70.0 90 > th dose dependent rect. 11 19
481 33.81 radiation 1.0 1440 < th dose dependent rect. 11 13
489 33.81 radiation 1.0 720 < th dose dependent rect. 10 23
495 33.82 radiation 1.0 720 < th dose dependent rect. 7 14
507 33.83 humidity 90.0 90 > th dose independent rect. 10 21
525 33.84 precipitation 0.1 720 < th dose independent rect. 12 21
526 33.84 radiation 1.0 720 < th dose dependent no NA NA
542 33.84 precipitation 0.1 720 < th dose dependent rect. 12 21
575 33.86 humidity 90.0 30 > th dose dependent rect. 24 18
585 33.87 humidity 90.0 720 < th dose dependent rect. 12 5
619 33.89 precipitation 0.1 90 > th dose independent rect. 3 14
654 33.90 humidity 70.0 270 > th dose dependent rect. 9 20
655 33.91 humidity 90.0 30 > th dose independent sin 7 NA
680 33.92 humidity 80.0 1440 > th dose independent rect. 11 3
698 33.92 humidity 90.0 30 > th dose dependent rect. 5 23
699 33.93 humidity 80.0 1440 < th dose independent rect. 11 3
763 33.96 humidity 90.0 30 > th dose dependent rect. 24 12
804 33.98 radiation 1.0 1440 < th dose dependent sin 19 NA
840 34.00 precipitation 0.1 720 < th dose independent rect. 12 8
841 34.00 precipitation 0.1 720 < th dose independent rect. 8 16
844 34.00 precipitation 0.1 720 < th dose dependent rect. 12 8
853 34.00 precipitation 0.1 720 < th dose dependent rect. 8 16
863 34.01 temperature 30.0 10 < th dose dependent rect. 2 12
925 34.04 humidity 50.0 720 > th dose dependent rect. 10 19
927 34.05 precipitation 0.1 270 > th dose independent rect. 2 2
931 34.05 precipitation 0.1 270 > th dose dependent rect. 2 2
932 34.05 temperature 15.0 270 > th dose dependent rect. 4 9
990 34.09 humidity 50.0 720 > th dose dependent rect. 14 15
995 34.10 humidity 90.0 30 > th dose independent rect. 24 7