Os09g0470500
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Homeodomain leucine zipper protein.
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Os09g0470500 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Homeodomain leucine zipper protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = radiation,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 94.36 | 0.456 | 10.6 | 1.96 | 0.447 | -0.211 | -1.3 | 2.43 | 0.313 | 21.5 | 20 | 11 | -- | -- |
| 102.41 | 0.475 | 10.6 | 1.97 | 0.531 | -0.316 | 1.39 | -- | 0.312 | 23.3 | 20 | 11 | -- | -- |
| 96.62 | 0.458 | 10.6 | 2.01 | 0.569 | -0.366 | -- | 1.74 | 0.315 | 22.4 | 21.17 | 13 | -- | -- |
| 109.28 | 0.487 | 10.6 | 1.94 | 0.56 | -0.304 | -- | -- | 0.294 | 22.4 | 14.72 | 5 | -- | -- |
| 101.32 | 0.469 | 10.6 | 2 | -- | 0.117 | -- | 1.98 | 0.316 | -- | 46.56 | 9 | -- | -- |
| 103.93 | 0.478 | 10.6 | 1.98 | 0.143 | -- | 1.52 | -- | 0.313 | 0.721 | -- | -- | -- | -- |
| 110.5 | 0.492 | 10.6 | 1.93 | 0.282 | -- | -- | -- | 0.31 | 20.6 | -- | -- | -- | -- |
| 113.99 | 0.497 | 10.6 | 1.92 | -- | 0.158 | -- | -- | 0.313 | -- | 53.29 | 35 | -- | -- |
| 206.58 | 0.669 | 10.7 | -- | 0.521 | -0.288 | -- | -- | 0.0884 | 22.6 | 22.08 | 6 | -- | -- |
| 114.96 | 0.501 | 10.6 | 1.93 | -- | -- | -- | -- | 0.308 | -- | -- | -- | -- | -- |
| 208.38 | 0.675 | 10.7 | -- | 0.277 | -- | -- | -- | 0.0958 | 21.1 | -- | -- | -- | -- |
| 211.62 | 0.678 | 10.7 | -- | -- | 0.194 | -- | -- | 0.1 | -- | 78.94 | 69 | -- | -- |
| 212.82 | 0.681 | 10.7 | -- | -- | -- | -- | -- | 0.0942 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 86.73 | temperature | 30.0 | 10 | < th | dose dependent | rect. | 13 | 18 |
| 2 | 86.82 | temperature | 30.0 | 90 | < th | dose dependent | rect. | 12 | 19 |
| 8 | 87.50 | temperature | 30.0 | 10 | < th | dose dependent | rect. | 13 | 21 |
| 22 | 88.26 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 6 | 18 |
| 33 | 88.92 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 20 | 15 |
| 34 | 88.93 | temperature | 15.0 | 90 | > th | dose dependent | rect. | 22 | 15 |
| 40 | 89.03 | temperature | 25.0 | 90 | < th | dose independent | rect. | 12 | 19 |
| 49 | 89.22 | temperature | 10.0 | 10 | > th | dose dependent | rect. | 23 | 13 |
| 109 | 90.17 | temperature | 10.0 | 10 | > th | dose dependent | rect. | 7 | 20 |
| 110 | 90.18 | temperature | 20.0 | 30 | > th | dose dependent | sin | 6 | NA |
| 137 | 90.44 | temperature | 25.0 | 90 | < th | dose independent | rect. | 15 | 16 |
| 139 | 90.45 | temperature | 10.0 | 30 | > th | dose dependent | sin | 7 | NA |
| 234 | 91.11 | temperature | 20.0 | 270 | > th | dose dependent | rect. | 3 | 8 |
| 244 | 91.15 | temperature | 25.0 | 720 | < th | dose dependent | rect. | 18 | 1 |
| 255 | 91.22 | temperature | 15.0 | 270 | > th | dose independent | rect. | 7 | 17 |
| 258 | 91.25 | wind | 1.0 | 270 | > th | dose independent | rect. | 24 | 7 |
| 259 | 91.25 | temperature | 15.0 | 30 | > th | dose independent | rect. | 7 | 20 |
| 263 | 91.26 | temperature | 25.0 | 270 | < th | dose independent | rect. | 24 | 7 |
| 274 | 91.30 | temperature | 15.0 | 10 | > th | dose independent | rect. | 22 | 14 |
| 275 | 91.30 | temperature | 20.0 | 90 | > th | dose dependent | rect. | 5 | 8 |
| 287 | 91.37 | wind | 5.0 | 14400 | > th | dose independent | rect. | 20 | 7 |
| 294 | 91.40 | temperature | 30.0 | 270 | < th | dose dependent | rect. | 23 | 8 |
| 299 | 91.41 | temperature | 30.0 | 90 | < th | dose dependent | rect. | 1 | 9 |
| 316 | 91.52 | temperature | 25.0 | 720 | < th | dose dependent | rect. | 17 | 3 |
| 366 | 91.72 | wind | 5.0 | 14400 | < th | dose independent | rect. | 20 | 7 |
| 385 | 91.84 | temperature | 30.0 | 90 | < th | dose dependent | sin | 8 | NA |
| 401 | 91.90 | temperature | 30.0 | 10 | < th | dose dependent | rect. | 24 | 10 |
| 446 | 92.05 | atmosphere | 1000.0 | 270 | > th | dose independent | rect. | 1 | 5 |
| 447 | 92.05 | atmosphere | 1000.0 | 270 | > th | dose independent | rect. | 24 | 7 |
| 459 | 92.08 | wind | 5.0 | 14400 | > th | dose dependent | rect. | 21 | 4 |
| 460 | 92.08 | atmosphere | 995.0 | 270 | > th | dose dependent | rect. | 1 | 6 |
| 479 | 92.13 | temperature | 25.0 | 90 | < th | dose independent | rect. | 17 | 14 |
| 494 | 92.16 | temperature | 20.0 | 90 | > th | dose dependent | rect. | 1 | 12 |
| 515 | 92.23 | wind | 5.0 | 14400 | > th | dose dependent | rect. | 20 | 7 |
| 581 | 92.37 | temperature | 15.0 | 30 | > th | dose independent | rect. | 11 | 16 |
| 582 | 92.37 | radiation | 30.0 | 10 | < th | dose independent | rect. | 13 | 18 |
| 599 | 92.41 | temperature | 10.0 | 720 | > th | dose dependent | rect. | 13 | 5 |
| 603 | 92.42 | atmosphere | 1000.0 | 10 | > th | dose independent | rect. | 13 | 18 |
| 641 | 92.50 | radiation | 10.0 | 270 | < th | dose independent | rect. | 1 | 6 |
| 658 | 92.54 | temperature | 20.0 | 270 | > th | dose independent | rect. | 20 | 15 |
| 664 | 92.55 | radiation | 40.0 | 90 | < th | dose independent | rect. | 12 | 19 |
| 666 | 92.55 | radiation | 20.0 | 270 | < th | dose dependent | rect. | 1 | 6 |
| 684 | 92.61 | humidity | 70.0 | 270 | > th | dose independent | rect. | 1 | 6 |
| 711 | 92.67 | wind | 7.0 | 270 | < th | dose independent | rect. | 1 | 6 |
| 718 | 92.68 | temperature | 15.0 | 1440 | > th | dose independent | rect. | 14 | 17 |
| 732 | 92.71 | temperature | 15.0 | 30 | > th | dose independent | rect. | 11 | 14 |
| 734 | 92.72 | wind | 5.0 | 90 | < th | dose independent | rect. | 3 | 4 |
| 735 | 92.72 | atmosphere | 1000.0 | 90 | > th | dose independent | rect. | 3 | 4 |
| 755 | 92.74 | temperature | 15.0 | 1440 | > th | dose independent | rect. | 14 | 10 |
| 757 | 92.74 | radiation | 40.0 | 10 | < th | dose dependent | rect. | 3 | 8 |
| 781 | 92.78 | temperature | 10.0 | 720 | > th | dose dependent | rect. | 11 | 7 |
| 797 | 92.80 | temperature | 10.0 | 270 | > th | dose independent | rect. | 1 | 6 |
| 800 | 92.80 | humidity | 50.0 | 270 | > th | dose independent | rect. | 1 | 6 |
| 803 | 92.80 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 1 | 6 |
| 838 | 92.84 | temperature | 15.0 | 1440 | > th | dose independent | sin | 18 | NA |
| 839 | 92.84 | wind | 7.0 | 14400 | > th | dose independent | rect. | 21 | 1 |
| 845 | 92.85 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 1 | 6 |
| 847 | 92.85 | humidity | 50.0 | 270 | > th | dose independent | rect. | 7 | 18 |
| 849 | 92.85 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 1 | 6 |
| 881 | 92.88 | atmosphere | 995.0 | 90 | > th | dose dependent | rect. | 3 | 4 |
| 898 | 92.90 | wind | 7.0 | 14400 | < th | dose independent | rect. | 21 | 1 |
| 905 | 92.91 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 19 | 6 |
| 909 | 92.91 | radiation | 1.0 | 720 | < th | dose dependent | rect. | 12 | 18 |
| 920 | 92.92 | radiation | 40.0 | 10 | < th | dose dependent | rect. | 12 | 23 |
| 940 | 92.96 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 7 | 18 |
| 944 | 92.96 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 7 | 18 |
| 953 | 92.97 | temperature | 10.0 | 10 | > th | dose dependent | rect. | 11 | 16 |
| 957 | 92.97 | radiation | 40.0 | 10 | < th | dose dependent | rect. | 13 | 18 |
| 973 | 93.01 | humidity | 90.0 | 720 | < th | dose independent | rect. | 14 | 5 |
| 983 | 93.02 | radiation | 20.0 | 10 | < th | dose independent | rect. | 3 | 8 |