Os09g0467200
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Glutathione S-transferase GST 23 (EC 2.5.1.18) (Fragment).
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Os09g0467200 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Glutathione S-transferase GST 23 (EC 2.5.1.18) (Fragment).
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 89.16 | 0.444 | 14.2 | 0.794 | 0.444 | 0.792 | -0.383 | -11.2 | 0.583 | 5.46 | 28.47 | 1584 | -- | -- |
| 97.4 | 0.46 | 14 | 2.89 | 0.439 | -0.419 | -0.279 | -- | 0.816 | 5.22 | 31.36 | 3524 | -- | -- |
| 89.48 | 0.441 | 14.2 | 0.814 | 0.441 | 0.76 | -- | -10.8 | 0.584 | 5.53 | 28.43 | 1560 | -- | -- |
| 97.29 | 0.459 | 14 | 2.88 | 0.459 | -0.508 | -- | -- | 0.792 | 5.37 | 31.23 | 3998 | -- | -- |
| 99.52 | 0.465 | 14.2 | 1.02 | -- | 0.734 | -- | -10.8 | 0.65 | -- | 28.76 | 1627 | -- | -- |
| 105.67 | 0.482 | 14 | 2.75 | 0.388 | -- | -0.408 | -- | 0.855 | 5.65 | -- | -- | -- | -- |
| 106.07 | 0.482 | 14 | 2.75 | 0.386 | -- | -- | -- | 0.857 | 5.78 | -- | -- | -- | -- |
| 105.43 | 0.478 | 14 | 2.88 | -- | -0.513 | -- | -- | 0.783 | -- | 30.6 | 3482 | -- | -- |
| 289.51 | 0.792 | 14.1 | -- | 0.699 | 1.19 | -- | -- | 0.414 | 4.09 | 5.284 | 11 | -- | -- |
| 113.81 | 0.498 | 14 | 2.76 | -- | -- | -- | -- | 0.866 | -- | -- | -- | -- | -- |
| 304.84 | 0.817 | 14.1 | -- | 0.431 | -- | -- | -- | 0.551 | 5.49 | -- | -- | -- | -- |
| 179.99 | 0.625 | 14.2 | -- | -- | 1.86 | -- | -- | 0.00178 | -- | -11.09 | 47520 | -- | -- |
| 314.49 | 0.828 | 14.1 | -- | -- | -- | -- | -- | 0.56 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 88.64 | wind | 7 | 43200 | < th | dose independent | rect. | 18 | 15 |
| 2 | 88.66 | wind | 7 | 43200 | > th | dose independent | rect. | 18 | 15 |
| 3 | 88.79 | wind | 7 | 43200 | < th | dose independent | rect. | 19 | 10 |
| 4 | 88.79 | wind | 7 | 43200 | > th | dose independent | rect. | 18 | 12 |
| 28 | 89.28 | wind | 5 | 43200 | > th | dose dependent | rect. | 18 | 15 |
| 39 | 89.54 | wind | 5 | 43200 | > th | dose dependent | rect. | 20 | 9 |
| 45 | 89.73 | wind | 7 | 43200 | > th | dose dependent | rect. | 18 | 12 |
| 57 | 89.88 | wind | 7 | 43200 | < th | dose independent | sin | 10 | NA |
| 59 | 89.88 | wind | 9 | 43200 | > th | dose dependent | rect. | 16 | 2 |
| 62 | 89.93 | wind | 7 | 43200 | > th | dose independent | sin | 10 | NA |
| 67 | 89.97 | wind | 5 | 43200 | > th | dose dependent | sin | 10 | NA |
| 69 | 89.99 | wind | 5 | 43200 | > th | dose dependent | rect. | 21 | 1 |
| 81 | 90.13 | temperature | 30 | 1440 | > th | dose dependent | rect. | 14 | 1 |
| 91 | 90.25 | atmosphere | 1000 | 90 | > th | dose independent | rect. | 19 | 23 |
| 94 | 90.34 | wind | 7 | 43200 | > th | dose independent | rect. | 21 | 1 |
| 95 | 90.35 | wind | 7 | 43200 | < th | dose independent | rect. | 8 | 1 |
| 103 | 90.43 | wind | 7 | 43200 | < th | dose independent | rect. | 21 | 1 |
| 121 | 90.62 | temperature | 30 | 1440 | < th | dose independent | rect. | 15 | 21 |
| 125 | 90.66 | wind | 7 | 43200 | > th | dose independent | rect. | 8 | 1 |
| 126 | 90.67 | temperature | 30 | 1440 | > th | dose independent | rect. | 14 | 23 |
| 143 | 90.78 | wind | 5 | 43200 | > th | dose dependent | rect. | 8 | 1 |
| 148 | 90.80 | temperature | 30 | 1440 | > th | dose independent | sin | 11 | NA |
| 149 | 90.80 | temperature | 30 | 1440 | > th | dose independent | rect. | 15 | 21 |
| 164 | 90.85 | temperature | 30 | 1440 | < th | dose independent | sin | 11 | NA |
| 183 | 90.96 | temperature | 30 | 1440 | > th | dose dependent | rect. | 13 | 6 |
| 249 | 91.03 | temperature | 30 | 1440 | > th | dose independent | rect. | 17 | 22 |
| 257 | 91.06 | temperature | 30 | 1440 | > th | dose dependent | rect. | 17 | 23 |
| 264 | 91.08 | temperature | 30 | 1440 | > th | dose independent | rect. | 9 | 10 |
| 279 | 91.08 | temperature | 30 | 1440 | > th | dose dependent | sin | 18 | NA |
| 317 | 91.13 | temperature | 30 | 1440 | > th | dose independent | no | NA | NA |
| 318 | 91.13 | wind | 9 | 43200 | < th | dose independent | rect. | 17 | 1 |
| 446 | 91.16 | temperature | 30 | 1440 | > th | dose independent | sin | 4 | NA |
| 476 | 91.18 | temperature | 30 | 1440 | > th | dose dependent | no | NA | NA |
| 591 | 91.21 | temperature | 30 | 4320 | < th | dose independent | rect. | 14 | 6 |
| 615 | 91.22 | temperature | 30 | 4320 | < th | dose independent | rect. | 14 | 10 |
| 626 | 91.23 | temperature | 30 | 4320 | < th | dose independent | rect. | 14 | 15 |
| 646 | 91.26 | temperature | 30 | 1440 | > th | dose independent | rect. | 12 | 23 |
| 648 | 91.27 | temperature | 30 | 1440 | < th | dose independent | sin | 6 | NA |
| 662 | 91.30 | temperature | 30 | 4320 | > th | dose independent | rect. | 14 | 5 |
| 743 | 91.38 | temperature | 30 | 1440 | < th | dose independent | rect. | 9 | 11 |
| 748 | 91.39 | temperature | 30 | 1440 | > th | dose independent | rect. | 9 | 6 |
| 749 | 91.39 | temperature | 30 | 1440 | < th | dose independent | rect. | 7 | 13 |
| 751 | 91.39 | temperature | 30 | 1440 | < th | dose independent | rect. | 9 | 15 |
| 752 | 91.39 | temperature | 30 | 1440 | < th | dose independent | rect. | 4 | 16 |
| 772 | 91.40 | temperature | 30 | 1440 | < th | dose independent | rect. | 4 | 20 |
| 773 | 91.40 | temperature | 30 | 1440 | < th | dose independent | rect. | 9 | 20 |
| 776 | 91.40 | temperature | 30 | 1440 | < th | dose independent | rect. | 9 | 23 |
| 836 | 91.42 | temperature | 30 | 1440 | < th | dose independent | rect. | 7 | 22 |
| 844 | 91.43 | temperature | 30 | 1440 | < th | dose independent | no | NA | NA |
| 911 | 91.47 | temperature | 30 | 1440 | < th | dose independent | rect. | 18 | 17 |
| 953 | 91.54 | temperature | 25 | 4320 | < th | dose independent | rect. | 5 | 3 |
| 986 | 91.57 | temperature | 25 | 4320 | > th | dose independent | rect. | 6 | 1 |