Os09g0465600
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Glucose-6-phosphate isomerase-like protein (Fragment).
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Os09g0465600 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Glucose-6-phosphate isomerase-like protein (Fragment).
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 79.77 | 0.42 | 12 | -1.56 | 2.4 | -0.704 | -0.62 | -0.565 | -0.257 | 15 | 21.2 | 961 | -- | -- |
| 79.77 | 0.416 | 12 | -1.43 | 2.41 | -0.651 | -0.576 | -- | -0.214 | 15 | 21.5 | 884 | -- | -- |
| 80.54 | 0.418 | 12 | -1.55 | 2.4 | -0.668 | -- | -0.332 | -0.239 | 15 | 21.5 | 879 | -- | -- |
| 80.82 | 0.419 | 12 | -1.44 | 2.4 | -0.656 | -- | -- | -0.219 | 15 | 21.5 | 876 | -- | -- |
| 404.99 | 0.937 | 12 | -1.49 | -- | -0.959 | -- | -0.124 | -0.131 | -- | 22.2 | 1025 | -- | -- |
| 94.47 | 0.456 | 12.1 | -1.68 | 2.45 | -- | -0.635 | -- | -0.406 | 14.8 | -- | -- | -- | -- |
| 95.85 | 0.458 | 12.1 | -1.69 | 2.45 | -- | -- | -- | -0.41 | 14.8 | -- | -- | -- | -- |
| 373 | 0.903 | 12.2 | -2.03 | -- | 0.869 | -- | -- | -0.906 | -- | 24.8 | 1062 | -- | -- |
| 93.19 | 0.45 | 11.9 | -- | 2.43 | -1.36 | -- | -- | 0.145 | 14.9 | 19.33 | 47520 | -- | -- |
| 443.39 | 0.984 | 12.1 | -1.8 | -- | -- | -- | -- | -0.472 | -- | -- | -- | -- | -- |
| 171.45 | 0.613 | 12 | -- | 2.48 | -- | -- | -- | -0.221 | 14.8 | -- | -- | -- | -- |
| 433.46 | 0.97 | 11.9 | -- | -- | -1.47 | -- | -- | 0.192 | -- | 20.76 | 47520 | -- | -- |
| 528.69 | 1.07 | 12 | -- | -- | -- | -- | -- | -0.273 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 72.98 | humidity | 50.0 | 90 | > th | dose dependent | rect. | 3 | 19 |
| 5 | 74.09 | humidity | 50.0 | 270 | > th | dose dependent | rect. | 1 | 19 |
| 38 | 76.09 | humidity | 70.0 | 90 | > th | dose independent | rect. | 3 | 19 |
| 45 | 76.28 | radiation | 10.0 | 270 | < th | dose dependent | rect. | 1 | 20 |
| 54 | 76.68 | temperature | 15.0 | 270 | > th | dose independent | rect. | 16 | 14 |
| 136 | 77.96 | radiation | 1.0 | 270 | < th | dose independent | rect. | 2 | 18 |
| 143 | 78.17 | radiation | 1.0 | 270 | < th | dose independent | rect. | 3 | 16 |
| 145 | 78.21 | humidity | 50.0 | 90 | > th | dose independent | rect. | 3 | 19 |
| 150 | 78.24 | humidity | 50.0 | 90 | > th | dose dependent | rect. | 3 | 10 |
| 156 | 78.32 | radiation | 1.0 | 270 | < th | dose independent | rect. | 1 | 20 |
| 159 | 78.36 | humidity | 50.0 | 270 | > th | dose independent | rect. | 1 | 20 |
| 163 | 78.44 | humidity | 50.0 | 270 | > th | dose dependent | rect. | 1 | 12 |
| 180 | 78.55 | humidity | 70.0 | 270 | > th | dose independent | rect. | 1 | 18 |
| 192 | 78.76 | atmosphere | 995.0 | 270 | > th | dose dependent | rect. | 22 | 3 |
| 195 | 78.79 | radiation | 1.0 | 270 | > th | dose independent | rect. | 6 | 10 |
| 206 | 78.92 | radiation | 40.0 | 270 | < th | dose dependent | rect. | 15 | 15 |
| 209 | 78.96 | temperature | 15.0 | 270 | > th | dose independent | rect. | 6 | 10 |
| 236 | 79.26 | atmosphere | 995.0 | 90 | > th | dose dependent | rect. | 22 | 5 |
| 258 | 79.45 | temperature | 10.0 | 720 | > th | dose dependent | rect. | 1 | 5 |
| 262 | 79.47 | radiation | 1.0 | 270 | < th | dose independent | sin | 1 | NA |
| 266 | 79.50 | radiation | 1.0 | 270 | < th | dose dependent | sin | 1 | NA |
| 274 | 79.53 | radiation | 1.0 | 270 | > th | dose independent | sin | 1 | NA |
| 281 | 79.58 | radiation | 20.0 | 270 | < th | dose independent | rect. | 16 | 14 |
| 310 | 79.77 | temperature | 20.0 | 720 | > th | dose dependent | rect. | 3 | 2 |
| 326 | 79.84 | humidity | 50.0 | 10 | > th | dose independent | rect. | 3 | 19 |
| 327 | 79.84 | atmosphere | 995.0 | 90 | > th | dose independent | rect. | 3 | 19 |
| 332 | 79.88 | temperature | 20.0 | 720 | > th | dose independent | rect. | 3 | 2 |
| 359 | 80.01 | humidity | 50.0 | 270 | > th | dose independent | rect. | 16 | 14 |
| 391 | 80.13 | radiation | 10.0 | 90 | < th | dose dependent | sin | 23 | NA |
| 395 | 80.17 | radiation | 1.0 | 90 | > th | dose independent | sin | 23 | NA |
| 396 | 80.17 | radiation | 1.0 | 90 | < th | dose independent | sin | 23 | NA |
| 398 | 80.18 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 1 | 21 |
| 410 | 80.24 | wind | 9.0 | 270 | < th | dose independent | rect. | 1 | 20 |
| 426 | 80.27 | humidity | 70.0 | 90 | > th | dose dependent | sin | 0 | NA |
| 442 | 80.34 | precipitation | 0.1 | 90 | < th | dose independent | rect. | 22 | 5 |
| 443 | 80.34 | humidity | 50.0 | 90 | > th | dose dependent | rect. | 22 | 5 |
| 444 | 80.34 | precipitation | 0.1 | 90 | < th | dose dependent | rect. | 22 | 5 |
| 446 | 80.35 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 6 | 10 |
| 448 | 80.35 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 6 | 10 |
| 450 | 80.36 | wind | 9.0 | 270 | < th | dose independent | rect. | 16 | 14 |
| 456 | 80.38 | temperature | 10.0 | 90 | > th | dose independent | rect. | 22 | 5 |
| 457 | 80.38 | temperature | 30.0 | 90 | < th | dose independent | rect. | 22 | 5 |
| 458 | 80.38 | humidity | 50.0 | 90 | > th | dose independent | rect. | 22 | 5 |
| 461 | 80.38 | atmosphere | 995.0 | 90 | > th | dose independent | rect. | 22 | 5 |
| 462 | 80.38 | radiation | 1.0 | 90 | < th | dose independent | rect. | 22 | 5 |
| 467 | 80.38 | temperature | 10.0 | 90 | > th | dose independent | rect. | 3 | 19 |
| 468 | 80.38 | atmosphere | 1015.0 | 90 | < th | dose independent | rect. | 3 | 19 |
| 469 | 80.38 | radiation | 1.0 | 90 | < th | dose dependent | rect. | 22 | 5 |
| 474 | 80.39 | wind | 9.0 | 90 | < th | dose independent | rect. | 22 | 5 |
| 477 | 80.39 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 1 | 20 |
| 484 | 80.42 | wind | 9.0 | 90 | < th | dose independent | rect. | 3 | 19 |
| 518 | 80.51 | wind | 1.0 | 270 | > th | dose independent | rect. | 22 | 3 |
| 519 | 80.51 | temperature | 20.0 | 720 | > th | dose independent | rect. | 2 | 4 |
| 536 | 80.56 | humidity | 90.0 | 90 | < th | dose dependent | rect. | 22 | 20 |
| 549 | 80.57 | temperature | 10.0 | 270 | > th | dose independent | rect. | 1 | 20 |
| 596 | 80.66 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 22 | 3 |
| 601 | 80.66 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 22 | 3 |
| 608 | 80.68 | radiation | 10.0 | 4320 | < th | dose dependent | rect. | 23 | 5 |
| 634 | 80.76 | humidity | 90.0 | 30 | < th | dose dependent | rect. | 7 | 11 |
| 652 | 80.81 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 6 | 10 |
| 659 | 80.82 | radiation | 10.0 | 10 | < th | dose independent | rect. | 4 | 18 |
| 707 | 80.98 | wind | 9.0 | 90 | < th | dose dependent | rect. | 3 | 19 |
| 732 | 81.07 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 16 | 14 |
| 767 | 81.14 | humidity | 50.0 | 10 | > th | dose dependent | rect. | 3 | 23 |
| 776 | 81.16 | humidity | 60.0 | 270 | > th | dose independent | rect. | 1 | 10 |
| 796 | 81.21 | radiation | 10.0 | 270 | < th | dose dependent | rect. | 9 | 10 |
| 824 | 81.29 | atmosphere | 1010.0 | 270 | < th | dose independent | rect. | 16 | 14 |
| 870 | 81.41 | temperature | 10.0 | 270 | > th | dose independent | rect. | 20 | 6 |
| 871 | 81.41 | temperature | 30.0 | 270 | < th | dose independent | rect. | 20 | 6 |
| 872 | 81.41 | humidity | 50.0 | 270 | > th | dose independent | rect. | 20 | 6 |
| 875 | 81.41 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 20 | 6 |
| 876 | 81.41 | radiation | 1.0 | 270 | < th | dose independent | rect. | 20 | 6 |
| 886 | 81.41 | radiation | 1.0 | 270 | < th | dose dependent | rect. | 20 | 6 |
| 895 | 81.43 | wind | 9.0 | 270 | < th | dose independent | rect. | 6 | 10 |
| 896 | 81.43 | temperature | 15.0 | 1440 | > th | dose independent | rect. | 5 | 18 |
| 902 | 81.44 | temperature | 20.0 | 270 | > th | dose independent | rect. | 15 | 6 |
| 905 | 81.45 | wind | 9.0 | 270 | < th | dose independent | rect. | 20 | 6 |
| 915 | 81.47 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 20 | 6 |
| 919 | 81.47 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 20 | 6 |
| 926 | 81.49 | radiation | 20.0 | 90 | < th | dose dependent | rect. | 15 | 18 |
| 977 | 81.55 | radiation | 1.0 | 270 | < th | dose independent | rect. | 8 | 11 |
| 983 | 81.56 | radiation | 40.0 | 90 | < th | dose independent | rect. | 3 | 19 |