Os09g0464100
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
FiT-DB / Search/ Help/ Sample detail
|
Os09g0464100 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Conserved hypothetical protein.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 253.48 | 0.748 | 3.86 | 4.02 | 1.7 | -1.45 | 3.69 | 1.07 | 0.615 | 23.3 | 24.9 | 1569 | -- | -- |
| 255.21 | 0.744 | 3.86 | 3.88 | 1.72 | -1.5 | 3.77 | -- | 0.62 | 23.2 | 24.6 | 1630 | -- | -- |
| 311.36 | 0.822 | 3.86 | 3.95 | 1.68 | -1.47 | -- | 1.41 | 0.641 | 23.4 | 24.6 | 1599 | -- | -- |
| 312.76 | 0.824 | 3.87 | 3.57 | 1.68 | -1.37 | -- | -- | 0.597 | 23.5 | 24.18 | 1599 | -- | -- |
| 423.22 | 0.963 | 3.89 | 3.19 | -- | -1.99 | -- | -2.23 | 0.512 | -- | 24.25 | 1600 | -- | -- |
| 321.45 | 0.841 | 3.94 | 3.27 | 1.64 | -- | 3.61 | -- | 0.371 | 23.3 | -- | -- | -- | -- |
| 376.98 | 0.909 | 3.94 | 3.12 | 1.62 | -- | -- | -- | 0.355 | 23.5 | -- | -- | -- | -- |
| 410.1 | 0.947 | 3.83 | 3.58 | -- | -2.3 | -- | -- | 0.708 | -- | 22.54 | 1612 | -- | -- |
| 622.01 | 1.17 | 4 | -- | 1.46 | -0.83 | -- | -- | 0.089 | 23 | 24.18 | 1599 | -- | -- |
| 542.72 | 1.09 | 3.9 | 3.16 | -- | -- | -- | -- | 0.373 | -- | -- | -- | -- | -- |
| 633.34 | 1.18 | 4.02 | -- | 1.66 | -- | -- | -- | 0.00748 | 23.6 | -- | -- | -- | -- |
| 736.47 | 1.27 | 3.94 | -- | -- | -1.65 | -- | -- | 0.229 | -- | 22.54 | 1612 | -- | -- |
| 806.59 | 1.33 | 3.98 | -- | -- | -- | -- | -- | 0.0217 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 245.64 | humidity | 80.0 | 43200 | > th | dose dependent | rect. | 20 | 1 |
| 4 | 248.76 | temperature | 25.0 | 14400 | > th | dose dependent | rect. | 7 | 1 |
| 9 | 249.54 | radiation | 30.0 | 4320 | < th | dose independent | rect. | 15 | 19 |
| 18 | 249.88 | temperature | 25.0 | 14400 | > th | dose independent | rect. | 20 | 1 |
| 22 | 250.01 | temperature | 25.0 | 14400 | < th | dose independent | rect. | 20 | 1 |
| 26 | 250.17 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 16 | 2 |
| 27 | 250.17 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 16 | 2 |
| 30 | 250.18 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 16 | 2 |
| 39 | 250.31 | temperature | 25.0 | 14400 | > th | dose independent | rect. | 19 | 3 |
| 43 | 250.38 | temperature | 25.0 | 14400 | < th | dose independent | rect. | 19 | 5 |
| 45 | 250.40 | temperature | 25.0 | 14400 | > th | dose independent | rect. | 18 | 6 |
| 46 | 250.42 | humidity | 70.0 | 14400 | > th | dose independent | rect. | 19 | 1 |
| 55 | 250.52 | temperature | 25.0 | 14400 | < th | dose independent | rect. | 17 | 8 |
| 71 | 250.78 | humidity | 70.0 | 43200 | > th | dose dependent | rect. | 18 | 1 |
| 74 | 250.79 | temperature | 25.0 | 14400 | > th | dose dependent | rect. | 20 | 16 |
| 82 | 250.87 | radiation | 10.0 | 14400 | < th | dose independent | rect. | 15 | 16 |
| 87 | 250.95 | humidity | 70.0 | 14400 | > th | dose independent | rect. | 19 | 12 |
| 99 | 251.01 | temperature | 25.0 | 14400 | > th | dose dependent | sin | 7 | NA |
| 108 | 251.08 | radiation | 30.0 | 4320 | > th | dose independent | rect. | 15 | 19 |
| 111 | 251.11 | temperature | 25.0 | 14400 | > th | dose dependent | rect. | 15 | 20 |
| 118 | 251.15 | radiation | 20.0 | 4320 | > th | dose dependent | rect. | 15 | 19 |
| 128 | 251.19 | humidity | 90.0 | 43200 | < th | dose independent | rect. | 21 | 1 |
| 134 | 251.21 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 14 | 4 |
| 136 | 251.22 | temperature | 25.0 | 1440 | > th | dose dependent | rect. | 9 | 6 |
| 154 | 251.30 | temperature | 25.0 | 1440 | > th | dose dependent | rect. | 10 | 4 |
| 170 | 251.40 | humidity | 70.0 | 14400 | > th | dose independent | rect. | 19 | 4 |
| 177 | 251.43 | temperature | 25.0 | 14400 | > th | dose independent | rect. | 6 | 2 |
| 191 | 251.50 | humidity | 70.0 | 14400 | > th | dose independent | rect. | 19 | 10 |
| 212 | 251.59 | humidity | 70.0 | 14400 | > th | dose independent | rect. | 19 | 7 |
| 228 | 251.65 | temperature | 25.0 | 14400 | > th | dose dependent | rect. | 6 | 18 |
| 231 | 251.66 | radiation | 10.0 | 14400 | < th | dose independent | sin | 13 | NA |
| 246 | 251.71 | humidity | 90.0 | 43200 | > th | dose independent | rect. | 21 | 1 |
| 259 | 251.75 | temperature | 25.0 | 14400 | < th | dose independent | rect. | 16 | 16 |
| 273 | 251.78 | temperature | 25.0 | 14400 | < th | dose independent | rect. | 6 | 2 |
| 291 | 251.82 | temperature | 25.0 | 14400 | < th | dose independent | sin | 13 | NA |
| 294 | 251.84 | temperature | 25.0 | 14400 | > th | dose dependent | no | NA | NA |
| 352 | 252.02 | temperature | 25.0 | 14400 | > th | dose dependent | rect. | 15 | 9 |
| 377 | 252.09 | temperature | 25.0 | 14400 | > th | dose independent | rect. | 17 | 15 |
| 409 | 252.18 | temperature | 25.0 | 14400 | > th | dose independent | sin | 13 | NA |
| 410 | 252.18 | temperature | 25.0 | 14400 | < th | dose independent | rect. | 23 | 1 |
| 413 | 252.18 | temperature | 25.0 | 14400 | > th | dose dependent | sin | 13 | NA |
| 515 | 252.41 | radiation | 10.0 | 14400 | < th | dose independent | rect. | 15 | 5 |
| 570 | 252.53 | temperature | 25.0 | 1440 | > th | dose dependent | rect. | 11 | 1 |
| 599 | 252.61 | temperature | 25.0 | 1440 | > th | dose dependent | rect. | 5 | 10 |
| 620 | 252.66 | temperature | 25.0 | 1440 | > th | dose dependent | rect. | 1 | 14 |
| 629 | 252.68 | temperature | 25.0 | 14400 | > th | dose dependent | rect. | 20 | 1 |
| 633 | 252.68 | temperature | 25.0 | 1440 | > th | dose dependent | rect. | 23 | 16 |
| 636 | 252.69 | radiation | 10.0 | 14400 | < th | dose independent | rect. | 13 | 6 |
| 642 | 252.69 | radiation | 10.0 | 14400 | < th | dose independent | rect. | 13 | 13 |
| 687 | 252.78 | radiation | 30.0 | 4320 | < th | dose independent | rect. | 7 | 3 |
| 706 | 252.84 | radiation | 30.0 | 4320 | < th | dose independent | rect. | 18 | 16 |
| 710 | 252.85 | radiation | 30.0 | 4320 | < th | dose independent | rect. | 4 | 6 |
| 720 | 252.87 | radiation | 30.0 | 4320 | < th | dose independent | rect. | 1 | 9 |
| 728 | 252.89 | humidity | 60.0 | 43200 | > th | dose independent | rect. | 15 | 1 |
| 752 | 252.94 | radiation | 30.0 | 4320 | < th | dose independent | rect. | 22 | 12 |
| 753 | 252.94 | temperature | 25.0 | 1440 | > th | dose dependent | sin | 2 | NA |
| 769 | 252.99 | temperature | 25.0 | 14400 | > th | dose independent | rect. | 23 | 1 |
| 809 | 253.17 | wind | 1.0 | 14400 | < th | dose dependent | rect. | 4 | 1 |
| 904 | 253.50 | radiation | 30.0 | 4320 | < th | dose independent | sin | 12 | NA |
| 948 | 253.65 | humidity | 90.0 | 43200 | < th | dose independent | rect. | 17 | 5 |
| 972 | 253.70 | temperature | 25.0 | 1440 | > th | dose dependent | rect. | 9 | 15 |