Os09g0463800
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os09g0463800 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 80.36 | 0.421 | 3 | 0.0142 | 0.156 | 0.513 | 0.101 | -0.732 | -0.0363 | 6.02 | 50.78 | 757 | -- | -- |
| 80.69 | 0.418 | 2.99 | 0.00574 | 0.158 | 0.409 | 0.143 | -- | -0.0398 | 6.37 | 50.98 | 756 | -- | -- |
| 80.39 | 0.418 | 3 | 0.0155 | 0.155 | 0.511 | -- | -0.751 | -0.0367 | 6.03 | 50.77 | 756 | -- | -- |
| 80.67 | 0.418 | 2.99 | 0.0378 | 0.147 | 0.358 | -- | -- | -0.0295 | 5.86 | 50 | 756 | -- | -- |
| 81.62 | 0.421 | 3 | 0.029 | -- | 0.468 | -- | -0.766 | -0.0352 | -- | 50.27 | 756 | -- | -- |
| 81.9 | 0.424 | 3 | 0.0972 | 0.136 | -- | 0.0348 | -- | -0.0643 | 5.03 | -- | -- | -- | -- |
| 81.91 | 0.424 | 3 | 0.0972 | 0.136 | -- | -- | -- | -0.0645 | 5.05 | -- | -- | -- | -- |
| 81.89 | 0.421 | 2.99 | 0.0543 | -- | 0.294 | -- | -- | -0.0359 | -- | 50.01 | 756 | -- | -- |
| 80.7 | 0.418 | 2.99 | -- | 0.156 | 0.352 | -- | -- | -0.0433 | 5.9 | 51 | 756 | -- | -- |
| 82.88 | 0.425 | 3 | 0.102 | -- | -- | -- | -- | -0.061 | -- | -- | -- | -- | -- |
| 82.16 | 0.424 | 3 | -- | 0.138 | -- | -- | -- | -0.0753 | 5.03 | -- | -- | -- | -- |
| 81.96 | 0.422 | 2.99 | -- | -- | 0.314 | -- | -- | -0.0478 | -- | 51 | 756 | -- | -- |
| 83.16 | 0.426 | 3 | -- | -- | -- | -- | -- | -0.0723 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 73.40 | temperature | 20.0 | 10 | > th | dose dependent | rect. | 3 | 1 |
| 2 | 73.92 | atmosphere | 1005.0 | 10 | > th | dose independent | rect. | 3 | 1 |
| 3 | 74.39 | humidity | 90.0 | 10 | > th | dose dependent | rect. | 3 | 1 |
| 4 | 74.50 | temperature | 20.0 | 10 | > th | dose independent | rect. | 3 | 1 |
| 11 | 75.47 | wind | 3.0 | 10 | < th | dose dependent | rect. | 3 | 1 |
| 19 | 75.96 | wind | 1.0 | 10 | > th | dose independent | rect. | 2 | 2 |
| 21 | 76.02 | atmosphere | 995.0 | 10 | > th | dose dependent | rect. | 3 | 1 |
| 24 | 76.07 | humidity | 90.0 | 10 | > th | dose independent | rect. | 3 | 1 |
| 34 | 76.55 | temperature | 25.0 | 10 | < th | dose independent | rect. | 3 | 1 |
| 37 | 76.59 | precipitation | 0.1 | 10 | < th | dose independent | rect. | 3 | 1 |
| 38 | 76.59 | precipitation | 0.1 | 10 | < th | dose dependent | rect. | 3 | 1 |
| 39 | 76.60 | wind | 3.0 | 10 | < th | dose independent | rect. | 3 | 1 |
| 52 | 76.96 | wind | 9.0 | 1440 | < th | dose independent | rect. | 3 | 1 |
| 53 | 76.96 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 3 | 1 |
| 56 | 76.96 | temperature | 30.0 | 1440 | < th | dose independent | rect. | 3 | 1 |
| 60 | 76.96 | humidity | 50.0 | 1440 | > th | dose independent | rect. | 3 | 1 |
| 69 | 76.96 | atmosphere | 995.0 | 1440 | > th | dose independent | rect. | 3 | 1 |
| 70 | 76.96 | radiation | 1.0 | 1440 | < th | dose independent | rect. | 3 | 1 |
| 90 | 76.96 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 4 | 23 |
| 93 | 76.96 | radiation | 1.0 | 1440 | < th | dose dependent | rect. | 3 | 1 |
| 114 | 77.06 | temperature | 10.0 | 10 | > th | dose independent | rect. | 3 | 1 |
| 117 | 77.06 | humidity | 50.0 | 10 | > th | dose independent | rect. | 3 | 1 |
| 121 | 77.06 | atmosphere | 1010.0 | 10 | < th | dose independent | rect. | 3 | 1 |
| 123 | 77.06 | radiation | 1.0 | 10 | < th | dose independent | rect. | 3 | 1 |
| 128 | 77.06 | temperature | 10.0 | 10 | > th | dose independent | rect. | 4 | 23 |
| 129 | 77.06 | radiation | 1.0 | 10 | < th | dose dependent | rect. | 3 | 1 |
| 136 | 77.17 | wind | 9.0 | 10 | < th | dose independent | rect. | 4 | 23 |
| 142 | 77.28 | precipitation | 0.1 | 10 | < th | dose independent | rect. | 4 | 23 |
| 144 | 77.28 | precipitation | 0.1 | 10 | < th | dose dependent | rect. | 4 | 23 |
| 146 | 77.35 | atmosphere | 995.0 | 10 | > th | dose independent | rect. | 4 | 23 |
| 158 | 77.56 | humidity | 50.0 | 720 | < th | dose independent | rect. | 16 | 1 |
| 159 | 77.58 | humidity | 50.0 | 720 | < th | dose dependent | rect. | 16 | 1 |
| 215 | 78.28 | temperature | 25.0 | 4320 | > th | dose dependent | rect. | 4 | 1 |
| 224 | 78.38 | atmosphere | 1015.0 | 10 | < th | dose independent | rect. | 4 | 23 |
| 268 | 78.65 | temperature | 30.0 | 720 | > th | dose dependent | rect. | 16 | 1 |
| 277 | 78.76 | radiation | 20.0 | 720 | > th | dose independent | rect. | 16 | 1 |
| 311 | 78.89 | atmosphere | 1015.0 | 10 | < th | dose dependent | rect. | 3 | 1 |
| 376 | 78.97 | wind | 1.0 | 270 | < th | dose independent | rect. | 24 | 1 |
| 394 | 79.02 | atmosphere | 1010.0 | 10 | < th | dose independent | rect. | 4 | 8 |
| 395 | 79.03 | humidity | 50.0 | 720 | > th | dose independent | rect. | 17 | 8 |
| 412 | 79.09 | humidity | 50.0 | 10 | > th | dose independent | rect. | 4 | 23 |
| 418 | 79.11 | radiation | 10.0 | 720 | > th | dose dependent | rect. | 16 | 2 |
| 449 | 79.13 | wind | 9.0 | 10 | < th | dose dependent | rect. | 4 | 23 |
| 453 | 79.15 | atmosphere | 1015.0 | 1440 | < th | dose independent | rect. | 3 | 1 |
| 482 | 79.21 | radiation | 40.0 | 10 | < th | dose independent | rect. | 4 | 23 |
| 526 | 79.31 | humidity | 50.0 | 10 | > th | dose dependent | rect. | 4 | 23 |
| 556 | 79.33 | radiation | 20.0 | 720 | < th | dose dependent | rect. | 17 | 8 |
| 558 | 79.34 | precipitation | 0.1 | 10 | < th | dose independent | rect. | 12 | 16 |
| 562 | 79.34 | precipitation | 0.1 | 10 | < th | dose dependent | rect. | 12 | 16 |
| 563 | 79.34 | radiation | 10.0 | 30 | < th | dose dependent | rect. | 4 | 23 |
| 580 | 79.39 | wind | 9.0 | 10 | < th | dose independent | rect. | 12 | 16 |
| 586 | 79.39 | humidity | 90.0 | 30 | > th | dose dependent | rect. | 21 | 7 |
| 602 | 79.42 | wind | 9.0 | 10 | < th | dose independent | rect. | 4 | 8 |
| 603 | 79.42 | temperature | 10.0 | 10 | > th | dose independent | rect. | 4 | 8 |
| 605 | 79.42 | atmosphere | 995.0 | 10 | > th | dose independent | rect. | 4 | 8 |
| 607 | 79.42 | temperature | 10.0 | 10 | > th | dose independent | rect. | 12 | 16 |
| 608 | 79.42 | atmosphere | 1015.0 | 10 | < th | dose independent | rect. | 12 | 16 |
| 611 | 79.43 | radiation | 40.0 | 30 | < th | dose dependent | rect. | 4 | 23 |
| 633 | 79.45 | humidity | 50.0 | 720 | < th | dose independent | rect. | 16 | 21 |
| 641 | 79.46 | precipitation | 0.1 | 10 | < th | dose independent | rect. | 4 | 8 |
| 645 | 79.46 | precipitation | 0.1 | 10 | < th | dose dependent | rect. | 4 | 8 |
| 678 | 79.49 | wind | 9.0 | 30 | < th | dose dependent | rect. | 15 | 13 |
| 694 | 79.52 | radiation | 10.0 | 30 | < th | dose independent | rect. | 4 | 23 |
| 711 | 79.55 | wind | 1.0 | 10 | > th | dose independent | rect. | 12 | 16 |
| 717 | 79.55 | wind | 9.0 | 30 | < th | dose dependent | rect. | 12 | 16 |
| 721 | 79.58 | humidity | 90.0 | 270 | > th | dose independent | rect. | 24 | 1 |
| 726 | 79.58 | radiation | 10.0 | 720 | < th | dose independent | rect. | 17 | 8 |
| 730 | 79.59 | temperature | 30.0 | 720 | > th | dose independent | rect. | 16 | 1 |
| 741 | 79.61 | temperature | 30.0 | 10 | < th | dose dependent | rect. | 3 | 1 |
| 760 | 79.63 | wind | 7.0 | 10 | < th | dose independent | rect. | 15 | 13 |
| 783 | 79.67 | precipitation | 0.1 | 10 | < th | dose independent | rect. | 15 | 13 |
| 784 | 79.67 | wind | 3.0 | 270 | < th | dose dependent | rect. | 24 | 1 |
| 800 | 79.67 | precipitation | 0.1 | 10 | < th | dose dependent | rect. | 15 | 13 |
| 807 | 79.68 | radiation | 40.0 | 10 | < th | dose dependent | rect. | 14 | 14 |
| 827 | 79.72 | wind | 1.0 | 10 | > th | dose independent | rect. | 2 | 14 |
| 852 | 79.73 | radiation | 20.0 | 10 | < th | dose independent | rect. | 14 | 14 |
| 855 | 79.73 | humidity | 50.0 | 10 | > th | dose independent | rect. | 12 | 16 |
| 861 | 79.74 | humidity | 50.0 | 720 | < th | dose independent | sin | 11 | NA |
| 908 | 79.75 | temperature | 10.0 | 10 | > th | dose independent | rect. | 4 | 11 |
| 910 | 79.75 | atmosphere | 995.0 | 10 | > th | dose independent | rect. | 4 | 11 |
| 912 | 79.75 | temperature | 10.0 | 10 | > th | dose independent | rect. | 15 | 13 |
| 928 | 79.75 | temperature | 10.0 | 10 | > th | dose dependent | rect. | 4 | 23 |
| 931 | 79.76 | wind | 9.0 | 10 | < th | dose independent | rect. | 4 | 11 |
| 945 | 79.77 | wind | 9.0 | 30 | < th | dose dependent | rect. | 4 | 8 |
| 949 | 79.78 | temperature | 25.0 | 270 | < th | dose independent | rect. | 24 | 1 |
| 952 | 79.78 | wind | 1.0 | 90 | > th | dose independent | rect. | 1 | 22 |
| 956 | 79.79 | temperature | 30.0 | 720 | < th | dose independent | rect. | 17 | 8 |
| 964 | 79.80 | precipitation | 0.1 | 10 | < th | dose independent | rect. | 4 | 11 |
| 965 | 79.80 | atmosphere | 995.0 | 10 | > th | dose independent | rect. | 12 | 16 |
| 969 | 79.80 | temperature | 10.0 | 10 | > th | dose dependent | rect. | 4 | 8 |
| 970 | 79.80 | precipitation | 0.1 | 10 | < th | dose dependent | rect. | 4 | 11 |
| 990 | 79.83 | temperature | 10.0 | 10 | > th | dose dependent | rect. | 12 | 16 |
| 994 | 79.84 | temperature | 30.0 | 720 | > th | dose independent | rect. | 16 | 3 |
| 1000 | 79.84 | humidity | 50.0 | 10 | > th | dose independent | rect. | 4 | 8 |