FiT-DB / Search/ Help/ Sample detail

Os09g0462200

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Esterase/lipase/thioesterase domain containing protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 11.4 (0.02) R2 : 0.665
β1 : -- (--) R2dD : -- R2D : --
β2 : 1.53 (0.0511) R2dC : 0.659 R2C : 0.66
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.0969 (0.0421) R2dN8 : 0.00504 R2N8 : 0.00607
σ : 0.377
deviance : 64.98
__
_____
C
peak time of C : 4
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = > th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
56.45 0.353 11.3 0.114 1.49 0.383 -0.452 0.443 0.188 4.06 32.27 2580 -- --
56.48 0.35 11.4 0.0486 1.48 0.436 -0.431 -- 0.191 4.06 31.84 2590 -- --
57.03 0.352 11.3 0.101 1.49 0.388 -- 0.334 0.191 4.09 32.35 2591 -- --
57.03 0.352 11.4 0.0548 1.49 0.427 -- -- 0.191 4.09 32.28 2577 -- --
172.94 0.612 11.3 0.14 -- 0.557 -- 0.515 0.245 -- 29 1214 -- --
63.93 0.375 11.4 0.152 1.53 -- -0.376 -- 0.112 3.98 -- -- -- --
64.34 0.376 11.4 0.156 1.53 -- -- -- 0.114 4.01 -- -- -- --
173.13 0.613 11.4 0.0496 -- 0.615 -- -- 0.23 -- 28.9 1214 -- --
57.1 0.352 11.4 -- 1.49 0.436 -- -- 0.189 4.09 32.31 2577 -- --
191.31 0.646 11.4 0.219 -- -- -- -- 0.155 -- -- -- -- --
64.98 0.377 11.4 -- 1.53 -- -- -- 0.0969 4 -- -- -- --
173.19 0.613 11.4 -- -- 0.622 -- -- 0.225 -- 28.84 1214 -- --
192.57 0.648 11.4 -- -- -- -- -- 0.131 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 39.49 wind 9.0 270 < th dose independent rect. 6 19
2 39.97 precipitation 0.1 270 < th dose independent rect. 1 5
3 39.97 precipitation 0.1 270 < th dose dependent rect. 1 5
5 40.10 humidity 50.0 270 > th dose dependent rect. 1 5
6 40.20 radiation 10.0 270 < th dose independent rect. 1 5
7 40.24 atmosphere 1010.0 270 < th dose independent rect. 1 5
8 40.27 radiation 20.0 270 < th dose dependent rect. 1 5
11 40.29 wind 9.0 270 < th dose independent rect. 1 5
12 40.29 temperature 10.0 270 > th dose independent rect. 1 5
14 40.29 temperature 30.0 270 < th dose independent rect. 1 5
15 40.29 humidity 50.0 270 > th dose independent rect. 1 5
18 40.29 atmosphere 995.0 270 > th dose independent rect. 1 5
23 40.29 temperature 10.0 270 > th dose independent rect. 6 19
27 40.34 wind 7.0 270 < th dose independent rect. 17 8
29 40.76 temperature 15.0 270 > th dose independent rect. 1 16
30 41.00 atmosphere 1015.0 270 < th dose independent rect. 6 19
34 41.14 atmosphere 1015.0 270 < th dose dependent rect. 1 5
35 41.23 wind 9.0 270 < th dose dependent rect. 1 5
38 41.36 wind 9.0 270 < th dose independent rect. 5 21
41 41.40 precipitation 0.1 270 < th dose independent rect. 6 19
42 41.40 precipitation 0.1 270 < th dose dependent rect. 6 19
43 41.44 temperature 10.0 270 > th dose dependent rect. 1 5
54 41.78 precipitation 0.1 270 < th dose independent rect. 12 18
55 41.78 precipitation 0.1 270 < th dose dependent rect. 12 18
58 41.80 precipitation 0.1 270 < th dose independent rect. 1 16
59 41.80 precipitation 0.1 270 < th dose dependent rect. 1 16
69 42.02 precipitation 0.1 270 < th dose independent rect. 2 3
70 42.02 precipitation 0.1 270 < th dose dependent rect. 2 3
71 42.03 humidity 50.0 270 > th dose dependent rect. 2 3
76 42.05 temperature 10.0 270 > th dose independent rect. 6 6
77 42.05 atmosphere 995.0 270 > th dose independent rect. 6 6
78 42.05 atmosphere 1015.0 270 < th dose independent rect. 6 6
79 42.05 temperature 10.0 270 > th dose independent rect. 12 18
85 42.13 radiation 30.0 270 < th dose dependent rect. 17 8
86 42.14 precipitation 0.1 270 < th dose independent rect. 6 6
87 42.14 precipitation 0.1 270 < th dose dependent rect. 6 6
95 42.24 wind 9.0 270 < th dose independent rect. 6 6
98 42.25 humidity 50.0 270 > th dose independent rect. 6 6
99 42.25 radiation 10.0 270 < th dose independent rect. 17 8
101 42.26 temperature 10.0 270 > th dose independent rect. 17 8
106 42.26 atmosphere 1015.0 270 < th dose independent rect. 1 16
110 42.32 wind 9.0 270 < th dose independent rect. 2 3
111 42.32 temperature 10.0 270 > th dose independent rect. 2 3
113 42.32 temperature 30.0 270 < th dose independent rect. 2 3
114 42.32 humidity 50.0 270 > th dose independent rect. 2 3
117 42.32 atmosphere 995.0 270 > th dose independent rect. 2 3
118 42.32 atmosphere 1010.0 270 < th dose independent rect. 2 3
120 42.32 radiation 1.0 270 < th dose independent rect. 2 3
125 42.32 temperature 10.0 270 > th dose independent rect. 5 21
126 42.33 radiation 10.0 270 < th dose dependent rect. 2 3
162 42.45 humidity 50.0 270 > th dose independent rect. 17 8
217 42.62 humidity 60.0 90 > th dose dependent rect. 3 6
221 42.66 atmosphere 995.0 270 > th dose independent rect. 6 19
231 42.78 wind 9.0 270 < th dose dependent rect. 2 3
235 42.83 atmosphere 995.0 270 > th dose independent rect. 17 8
246 42.89 precipitation 0.1 270 < th dose independent rect. 17 8
248 42.89 precipitation 0.1 270 < th dose dependent rect. 17 8
250 42.90 wind 7.0 10 < th dose dependent rect. 3 6
251 42.90 wind 9.0 270 < th dose dependent rect. 17 8
262 42.95 radiation 1.0 270 < th dose independent rect. 1 13
263 42.95 atmosphere 995.0 270 > th dose independent rect. 12 18
268 42.96 atmosphere 995.0 270 > th dose independent rect. 1 16
328 43.10 wind 9.0 270 < th dose independent rect. 1 16
339 43.16 radiation 40.0 90 < th dose dependent rect. 3 6
361 43.29 wind 9.0 270 < th dose independent rect. 12 18
394 43.44 radiation 1.0 270 < th dose dependent rect. 6 19
417 43.53 radiation 1.0 270 < th dose dependent rect. 1 14
420 43.54 wind 1.0 270 > th dose independent rect. 6 19
434 43.59 radiation 1.0 270 < th dose independent rect. 8 17
440 43.60 wind 3.0 30 < th dose independent rect. 3 6
497 43.72 atmosphere 1015.0 270 < th dose independent rect. 18 7
517 43.77 temperature 30.0 270 < th dose independent rect. 18 7
538 43.86 wind 1.0 270 > th dose independent rect. 1 5
544 43.90 radiation 20.0 90 < th dose independent rect. 3 6
548 43.91 temperature 15.0 270 > th dose independent rect. 11 9
596 43.98 wind 9.0 270 < th dose dependent rect. 6 19
625 44.11 precipitation 0.1 10 < th dose independent rect. 3 6
628 44.11 precipitation 0.1 10 < th dose dependent rect. 3 6
632 44.13 precipitation 0.1 270 < th dose independent rect. 11 9
634 44.13 precipitation 0.1 270 < th dose dependent rect. 11 9
640 44.16 atmosphere 1010.0 270 < th dose independent rect. 11 9
645 44.17 wind 9.0 10 < th dose independent rect. 9 18
653 44.22 wind 1.0 270 > th dose independent rect. 6 6
668 44.24 humidity 50.0 270 > th dose independent rect. 6 19
676 44.28 wind 7.0 10 < th dose independent rect. 3 6
692 44.35 radiation 40.0 10 < th dose independent rect. 3 6
714 44.43 temperature 10.0 10 > th dose independent rect. 3 6
716 44.43 temperature 30.0 10 < th dose independent rect. 3 6
717 44.43 humidity 50.0 10 > th dose independent rect. 3 6
719 44.43 atmosphere 995.0 10 > th dose independent rect. 3 6
720 44.43 atmosphere 1015.0 10 < th dose independent rect. 3 6
721 44.43 temperature 10.0 10 > th dose independent rect. 9 18
760 44.51 radiation 1.0 270 > th dose independent rect. 6 6
791 44.58 wind 1.0 270 > th dose independent rect. 17 8
806 44.63 temperature 10.0 270 > th dose independent rect. 20 15
807 44.63 atmosphere 995.0 270 > th dose independent rect. 20 15
815 44.65 humidity 50.0 270 > th dose independent rect. 20 15
826 44.67 precipitation 0.1 10 < th dose independent rect. 9 18
827 44.67 humidity 50.0 270 > th dose dependent rect. 18 7
830 44.67 precipitation 0.1 10 < th dose dependent rect. 9 18
836 44.70 wind 9.0 270 < th dose independent rect. 20 15
840 44.73 radiation 1.0 270 < th dose independent sin 5 NA
854 44.76 radiation 40.0 270 < th dose independent rect. 13 17
858 44.77 temperature 10.0 270 > th dose dependent rect. 18 7
898 44.86 atmosphere 1015.0 10 < th dose independent rect. 9 18
933 44.99 radiation 1.0 270 < th dose dependent sin 4 NA
946 45.04 wind 1.0 270 > th dose independent rect. 11 9
953 45.08 precipitation 0.1 270 < th dose independent rect. 20 15
955 45.08 precipitation 0.1 270 < th dose dependent rect. 20 15