Os09g0462000
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
FiT-DB / Search/ Help/ Sample detail
|
Os09g0462000 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Conserved hypothetical protein.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = radiation,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 91.88 | 0.45 | 7.94 | 1.05 | 0.608 | -1.62 | -0.937 | -1.38 | -0.294 | 22.8 | 0.8084 | 1449 | -- | -- |
| 93.3 | 0.45 | 7.94 | 1.04 | 0.644 | -1.29 | -0.936 | -- | -0.294 | 22.8 | 0.8662 | 1454 | -- | -- |
| 95.18 | 0.454 | 7.95 | 1.11 | 0.647 | -1.68 | -- | -1.62 | -0.301 | 23.1 | 0.7006 | 1463 | -- | -- |
| 96.53 | 0.458 | 7.95 | 0.976 | 0.61 | -1.28 | -- | -- | -0.293 | 23.1 | 0.8483 | 1453 | -- | -- |
| 107.87 | 0.484 | 7.93 | 0.996 | -- | -1.67 | -- | -1 | -0.321 | -- | 0.9964 | 1345 | -- | -- |
| 111.69 | 0.495 | 7.92 | 1.24 | 0.573 | -- | -0.838 | -- | -0.143 | 22.8 | -- | -- | -- | -- |
| 114.56 | 0.501 | 7.92 | 1.28 | 0.577 | -- | -- | -- | -0.141 | 23.1 | -- | -- | -- | -- |
| 106.24 | 0.48 | 7.94 | 0.999 | -- | -1.46 | -- | -- | -0.283 | -- | 1.161 | 1317 | -- | -- |
| 120.05 | 0.51 | 7.98 | -- | 0.672 | -1.54 | -- | -- | -0.283 | 23.3 | 3.799e-07 | 1467 | -- | -- |
| 135.29 | 0.544 | 7.91 | 1.29 | -- | -- | -- | -- | -0.137 | -- | -- | -- | -- | -- |
| 157.47 | 0.587 | 7.95 | -- | 0.589 | -- | -- | -- | -0.283 | 23.2 | -- | -- | -- | -- |
| 124.29 | 0.519 | 7.99 | -- | -- | -1.79 | -- | -- | -0.471 | -- | 0.6 | 2723 | -- | -- |
| 179.15 | 0.625 | 7.94 | -- | -- | -- | -- | -- | -0.28 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 83.06 | temperature | 30 | 90 | < th | dose dependent | rect. | 6 | 9 |
| 12 | 84.77 | temperature | 30 | 720 | < th | dose dependent | rect. | 5 | 4 |
| 13 | 84.87 | temperature | 10 | 720 | > th | dose dependent | rect. | 2 | 10 |
| 26 | 85.60 | temperature | 10 | 720 | > th | dose dependent | rect. | 24 | 14 |
| 39 | 85.91 | temperature | 30 | 720 | < th | dose dependent | sin | 6 | NA |
| 49 | 86.11 | temperature | 30 | 720 | < th | dose dependent | rect. | 1 | 10 |
| 54 | 86.23 | temperature | 30 | 720 | < th | dose dependent | rect. | 23 | 14 |
| 59 | 86.28 | temperature | 30 | 720 | < th | dose dependent | rect. | 3 | 7 |
| 96 | 86.83 | temperature | 10 | 720 | > th | dose dependent | sin | 6 | NA |
| 106 | 87.00 | temperature | 30 | 30 | < th | dose dependent | rect. | 6 | 22 |
| 145 | 87.51 | temperature | 30 | 270 | < th | dose dependent | sin | 2 | NA |
| 154 | 87.57 | temperature | 15 | 720 | > th | dose dependent | rect. | 2 | 4 |
| 180 | 87.85 | temperature | 15 | 720 | > th | dose dependent | rect. | 3 | 2 |
| 296 | 89.01 | temperature | 15 | 720 | > th | dose dependent | rect. | 18 | 18 |
| 301 | 89.04 | temperature | 10 | 270 | > th | dose dependent | sin | 2 | NA |
| 393 | 89.69 | humidity | 90 | 14400 | > th | dose dependent | rect. | 18 | 11 |
| 456 | 90.11 | humidity | 90 | 43200 | > th | dose independent | rect. | 21 | 2 |
| 529 | 90.56 | temperature | 25 | 270 | < th | dose independent | rect. | 6 | 7 |
| 568 | 90.76 | radiation | 1 | 1440 | < th | dose dependent | rect. | 7 | 22 |
| 573 | 90.80 | humidity | 90 | 43200 | < th | dose independent | rect. | 20 | 3 |
| 585 | 90.86 | radiation | 1 | 1440 | < th | dose dependent | rect. | 7 | 18 |
| 598 | 90.90 | radiation | 1 | 1440 | < th | dose dependent | rect. | 7 | 14 |
| 608 | 90.94 | humidity | 90 | 43200 | < th | dose independent | rect. | 22 | 1 |
| 617 | 90.98 | humidity | 90 | 43200 | > th | dose dependent | rect. | 22 | 1 |
| 689 | 91.31 | humidity | 90 | 4320 | > th | dose dependent | rect. | 20 | 1 |
| 705 | 91.40 | temperature | 15 | 270 | > th | dose dependent | rect. | 7 | 11 |
| 707 | 91.41 | humidity | 90 | 14400 | > th | dose dependent | sin | 13 | NA |
| 749 | 91.61 | radiation | 1 | 1440 | < th | dose dependent | rect. | 17 | 11 |
| 755 | 91.63 | radiation | 1 | 1440 | < th | dose dependent | rect. | 17 | 9 |
| 777 | 91.71 | radiation | 1 | 1440 | < th | dose dependent | rect. | 17 | 4 |
| 790 | 91.75 | radiation | 1 | 1440 | < th | dose dependent | rect. | 17 | 22 |
| 796 | 91.77 | humidity | 80 | 30 | > th | dose dependent | rect. | 4 | 2 |
| 851 | 91.97 | radiation | 1 | 1440 | < th | dose dependent | rect. | 14 | 23 |
| 859 | 91.99 | radiation | 1 | 1440 | < th | dose dependent | rect. | 14 | 21 |
| 860 | 92.00 | radiation | 1 | 1440 | < th | dose dependent | sin | 15 | NA |
| 877 | 92.04 | radiation | 1 | 1440 | < th | dose dependent | sin | 21 | NA |
| 882 | 92.04 | radiation | 1 | 1440 | < th | dose dependent | rect. | 14 | 15 |
| 915 | 92.12 | radiation | 1 | 1440 | < th | dose dependent | rect. | 14 | 11 |
| 934 | 92.17 | radiation | 1 | 1440 | < th | dose dependent | rect. | 14 | 7 |
| 940 | 92.18 | radiation | 1 | 1440 | < th | dose dependent | no | NA | NA |
| 943 | 92.18 | temperature | 30 | 90 | < th | dose dependent | rect. | 6 | 17 |
| 945 | 92.18 | radiation | 1 | 1440 | < th | dose dependent | rect. | 3 | 21 |
| 962 | 92.19 | radiation | 1 | 1440 | < th | dose dependent | rect. | 22 | 23 |
| 967 | 92.20 | radiation | 1 | 1440 | < th | dose dependent | rect. | 3 | 18 |
| 974 | 92.20 | radiation | 1 | 1440 | < th | dose dependent | rect. | 20 | 23 |