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Notice!
This gene did NOT pass the analysis criteria (log2(expression) > 5 in more than 80% of samples & normality of residuals was not rejected).
The modeling results may be unreliable.

Os09g0461800

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Esterase/lipase/thioesterase domain containing protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 5.82 (0.0334) R2 : 0.706
β1 : 1.22 (0.123) R2dD : 0.068 R2D : 0.0476
β2 : 1.44 (0.0845) R2dC : 0.199 R2C : 0.324
β3 : -2.69 (0.128) R2dE : 0.312 R2E : 0.423
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : -0.265 (0.0716) R2dN8 : 0.0112 R2N8 : 0.0258
σ : 0.624
deviance : 179.4
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_____
C
peak time of C : 9.62
E
wheather : temperature
threshold : 5.1
memory length : 218
response mode : > th
dose dependency : dose dependent
G
type of G : rect.
peak or start time of G : 5.67
open length of G : 21.2

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Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = > th, dose dependency = dose dependent, type of G = rect.)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
178.84 0.628 5.83 1.23 1.41 -2.65 0.673 0.721 -0.28 9.69 7.022 205 6.28 20.3
179.08 0.623 5.83 1.18 1.45 -2.63 0.635 -- -0.284 9.6 6.754 188 6.32 20.6
180.08 0.625 5.82 1.24 1.46 -2.59 -- 0.653 -0.266 9.48 6.934 186 6.25 20.6
179.4 0.624 5.82 1.22 1.44 -2.69 -- -- -0.265 9.62 5.1 218 5.67 21.2
202.01 0.662 5.92 1.37 -- -3.14 -- 0.121 -0.329 -- -0.1018 480 5.92 18.2
251.42 0.743 5.84 0.855 2.43 -- 0.705 -- -0.459 7.38 -- -- -- --
252.77 0.745 5.84 0.871 2.43 -- -- -- -0.461 7.37 -- -- -- --
199.1 0.657 5.89 1.25 -- -3.2 -- -- -0.321 -- -0.3485 495 6.03 18
215.17 0.683 5.86 -- 1.53 -2.35 -- -- -0.427 9.03 2.061 187 5.84 21.2
566.87 1.11 5.9 0.911 -- -- -- -- -0.421 -- -- -- -- --
272.75 0.773 5.87 -- 2.44 -- -- -- -0.558 7.34 -- -- -- --
237.1 0.717 5.93 -- -- -3.05 -- -- -0.429 -- -2.15 461 6.2 17.8
588.75 1.13 5.92 -- -- -- -- -- -0.522 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 182.65 temperature 10 270 > th dose dependent rect. 6 20
7 188.27 temperature 15 10 > th dose dependent rect. 7 21
24 191.88 temperature 20 270 > th dose independent rect. 6 20
25 191.94 temperature 30 270 < th dose dependent rect. 13 17
27 192.23 temperature 15 270 > th dose dependent rect. 20 14
57 194.57 temperature 20 270 > th dose independent rect. 18 8
94 197.14 temperature 15 270 > th dose dependent rect. 19 7
106 197.99 temperature 30 10 < th dose dependent rect. 14 18
109 198.06 temperature 10 270 > th dose dependent rect. 17 22
135 199.12 temperature 20 270 > th dose independent rect. 19 17
173 200.30 temperature 15 90 > th dose dependent rect. 21 7
179 200.71 temperature 30 90 < th dose dependent rect. 3 18
185 200.83 temperature 30 270 < th dose dependent rect. 1 5
218 201.78 temperature 30 270 < th dose dependent rect. 23 8
221 201.84 temperature 25 270 < th dose independent rect. 11 20
222 201.88 temperature 30 10 < th dose dependent rect. 12 20
228 202.23 temperature 25 270 < th dose independent rect. 13 18
235 202.33 temperature 30 270 < th dose dependent rect. 24 20
252 202.64 temperature 30 270 < th dose dependent rect. 1 18
337 204.33 temperature 30 10 < th dose dependent rect. 3 19
356 204.75 temperature 30 270 < th dose dependent rect. 3 2
363 204.92 temperature 30 90 < th dose dependent rect. 3 6
380 205.18 wind 9 14400 < th dose independent rect. 4 9
385 205.31 temperature 25 270 < th dose independent rect. 24 21
407 205.72 wind 9 14400 > th dose independent rect. 4 9
410 205.75 temperature 15 10 > th dose dependent rect. 21 7
419 205.80 wind 9 14400 < th dose independent rect. 2 11
462 206.40 wind 9 14400 > th dose dependent rect. 5 8
510 207.03 temperature 15 10 > th dose dependent rect. 22 16
519 207.11 temperature 25 270 < th dose independent rect. 1 6
553 207.51 temperature 10 270 > th dose dependent sin 9 NA
565 207.60 temperature 25 270 < th dose independent sin 9 NA
567 207.61 temperature 25 270 < th dose independent rect. 2 4
593 207.94 temperature 30 270 < th dose dependent sin 9 NA
605 208.11 temperature 10 90 > th dose dependent sin 7 NA
630 208.45 temperature 15 10 > th dose dependent rect. 21 19
645 208.63 temperature 30 90 < th dose dependent rect. 3 8
660 208.84 wind 1 43200 > th dose dependent rect. 1 1
666 208.89 temperature 30 10 < th dose dependent rect. 24 22
681 209.04 atmosphere 1005 14400 < th dose independent rect. 23 1
705 209.31 temperature 25 270 < th dose independent rect. 3 2
725 209.48 wind 9 14400 > th dose dependent rect. 10 3
739 209.64 temperature 30 90 < th dose dependent sin 7 NA
782 209.94 wind 3 43200 > th dose independent rect. 1 1
838 210.46 wind 9 14400 > th dose independent rect. 9 4
874 210.78 temperature 25 90 < th dose independent rect. 3 20
883 210.87 temperature 25 270 < th dose independent rect. 23 8
894 210.96 temperature 20 10 > th dose independent rect. 22 16
900 211.01 temperature 25 90 < th dose independent rect. 3 18
927 211.19 temperature 25 270 > th dose independent sin 9 NA
948 211.35 wind 9 14400 < th dose independent rect. 10 2
954 211.39 temperature 30 10 < th dose dependent rect. 3 23
955 211.41 wind 5 270 < th dose independent rect. 2 4
983 211.68 radiation 10 14400 < th dose dependent rect. 22 6
989 211.71 wind 3 43200 < th dose independent rect. 1 1
995 211.75 temperature 30 90 < th dose independent rect. 3 15