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Notice!
This gene did NOT pass the analysis criteria (log2(expression) > 5 in more than 80% of samples & normality of residuals was not rejected).
The modeling results may be unreliable.

Os09g0461500

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Esterase/lipase/thioesterase domain containing protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 7.9 (0.078) R2 : 0.744
β1 : -3.08 (0.288) R2dD : 0.0716 R2D : 0.0407
β2 : 6.49 (0.198) R2dC : 0.62 R2C : 0.593
β3 : -3.17 (0.259) R2dE : 0.0953 R2E : 0.0524
β4 : 4.02 (0.859) R2dD*C : 0.0124 R2D*C : 0.0069
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : -0.523 (0.169) R2dN8 : 0.0083 R2N8 : -0.0144
σ : 1.45
deviance : 969.7
__
_____
C
peak time of C : 7.8
E
wheather : humidity
threshold : 74
memory length : 1275
response mode : > th
dose dependency : dose independent
G
type of G : no
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = humidity, response mode = > th, dose dependency = dose independent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
970.22 1.46 7.86 -3.04 6.62 -3.01 4.17 -1.37 -0.494 7.79 73 1257 -- --
969.7 1.45 7.9 -3.08 6.49 -3.17 4.02 -- -0.523 7.8 74 1275 -- --
1014.4 1.48 7.85 -2.86 6.56 -2.93 -- -1.32 -0.508 7.74 74.02 1282 -- --
1015.09 1.48 7.89 -3.07 6.57 -3.25 -- -- -0.568 7.74 74.28 1280 -- --
3281.29 2.67 8.03 -2.85 -- -2.97 -- -1.21 -0.415 -- 73.1 1365 -- --
1288.98 1.68 7.8 -2.67 6.55 -- 3.84 -- -0.142 7.42 -- -- -- --
1329.3 1.71 7.8 -2.58 6.56 -- -- -- -0.149 7.4 -- -- -- --
3273.97 2.66 8.06 -2.96 -- -3.27 -- -- -0.489 -- 75 1356 -- --
1259.31 1.65 7.85 -- 6.6 -2.88 -- -- -0.248 7.73 75 1280 -- --
3618.99 2.81 7.96 -2.47 -- -- -- -- -0.0427 -- -- -- -- --
1504.66 1.81 7.74 -- 6.53 -- -- -- 0.138 7.43 -- -- -- --
3480.31 2.75 7.99 -- -- -3.71 -- -- 0.0963 -- 76 1381 -- --
3780.35 2.87 7.89 -- -- -- -- -- 0.232 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 974.33 humidity 70 14400 > th dose independent rect. 19 13
2 974.34 humidity 70 14400 < th dose independent rect. 18 14
4 977.61 humidity 70 14400 < th dose independent rect. 18 4
17 995.50 humidity 80 1440 < th dose independent rect. 6 9
21 996.77 humidity 70 14400 > th dose independent rect. 19 9
25 997.18 humidity 70 14400 > th dose independent rect. 19 6
42 998.26 humidity 60 720 > th dose dependent rect. 18 7
43 998.35 humidity 60 1440 > th dose dependent rect. 11 1
44 998.50 humidity 70 14400 > th dose independent rect. 19 1
57 1004.28 humidity 70 720 > th dose dependent rect. 19 4
59 1005.00 humidity 50 720 > th dose dependent rect. 16 16
63 1006.07 humidity 80 1440 > th dose independent rect. 6 9
72 1008.12 humidity 90 720 > th dose dependent rect. 19 5
90 1009.74 humidity 80 1440 < th dose independent sin 3 NA
99 1011.86 humidity 50 1440 > th dose dependent rect. 18 23
102 1012.12 humidity 50 1440 > th dose dependent rect. 22 22
103 1012.21 humidity 90 720 < th dose dependent rect. 17 8
112 1012.80 humidity 70 14400 < th dose dependent rect. 16 15
113 1012.91 humidity 50 1440 > th dose dependent rect. 22 19
114 1012.93 humidity 70 14400 < th dose dependent rect. 16 6
131 1013.82 humidity 50 1440 > th dose dependent rect. 9 23
144 1014.31 humidity 50 1440 > th dose dependent rect. 15 23
149 1014.64 humidity 90 720 < th dose dependent rect. 17 16
153 1014.77 humidity 90 720 < th dose dependent rect. 18 6
159 1015.03 humidity 50 1440 > th dose dependent rect. 5 23
166 1015.26 humidity 50 1440 > th dose dependent no NA NA
194 1016.07 humidity 50 1440 > th dose dependent rect. 13 23
239 1017.77 humidity 60 1440 > th dose dependent sin 2 NA
267 1018.54 humidity 90 720 < th dose dependent rect. 18 3
277 1018.75 humidity 90 1440 < th dose dependent rect. 18 23
287 1019.26 humidity 80 1440 > th dose independent sin 2 NA
307 1019.73 humidity 90 1440 < th dose dependent rect. 15 23
334 1020.55 humidity 60 1440 > th dose dependent rect. 5 10
361 1021.13 radiation 20 14400 > th dose dependent rect. 16 15
375 1021.37 humidity 90 1440 < th dose dependent rect. 9 23
377 1021.39 humidity 90 1440 < th dose dependent rect. 22 23
395 1021.63 humidity 90 1440 < th dose dependent rect. 13 23
419 1021.96 humidity 50 720 > th dose dependent sin 13 NA
440 1022.37 humidity 90 1440 < th dose dependent rect. 24 23
448 1022.45 humidity 90 1440 < th dose dependent no NA NA
459 1022.57 humidity 90 1440 < th dose dependent rect. 5 23
524 1023.54 radiation 20 14400 > th dose dependent rect. 16 2
701 1026.15 humidity 90 1440 < th dose dependent sin 2 NA
713 1026.45 humidity 80 1440 < th dose independent rect. 10 4
719 1026.60 humidity 90 720 > th dose dependent rect. 7 17
802 1028.04 humidity 70 1440 > th dose independent rect. 18 22
819 1028.33 humidity 90 720 < th dose dependent sin 13 NA
911 1029.83 humidity 70 1440 > th dose independent rect. 18 20
944 1030.38 radiation 1 1440 < th dose dependent rect. 18 23
950 1030.51 humidity 70 1440 > th dose independent rect. 9 22
954 1030.57 humidity 70 1440 > th dose independent rect. 9 11
957 1030.59 humidity 70 1440 > th dose independent rect. 9 20
968 1030.71 humidity 70 1440 > th dose independent rect. 9 16
987 1031.03 humidity 80 1440 > th dose independent rect. 10 4