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Notice!
This gene did NOT pass the analysis criteria (log2(expression) > 5 in more than 80% of samples & normality of residuals was not rejected).
The modeling results may be unreliable.

Os09g0460400

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Esterase/lipase/thioesterase domain containing protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 14.1 (0.0276) R2 : 0.194
β1 : -- (--) R2dD : -- R2D : --
β2 : 0.678 (0.0657) R2dC : 0.189 R2C : 0.188
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : -0.0937 (0.0581) R2dN8 : 0.00594 R2N8 : 0.00468
σ : 0.521
deviance : 123.85
__
_____
C
peak time of C : 11.7
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = humidity, response mode = > th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
91.26 0.449 14.1 0.681 0.642 -1.18 -0.215 4.32 -0.113 10.8 94.17 42 -- --
100.94 0.468 14.1 0.63 0.659 -1.64 -0.513 -- -0.0508 11.4 94.85 67 -- --
91.04 0.444 14.1 0.655 0.647 -1.38 -- 4.71 -0.112 10.7 94.46 41 -- --
101.62 0.469 14.1 0.611 0.668 -1.81 -- -- -0.0837 10.8 94.84 69 -- --
116.51 0.503 14.1 0.644 -- -1.52 -- 4.93 -0.122 -- 94.49 30 -- --
112.68 0.498 14.1 0.625 0.68 -- -0.672 -- -0.0227 12.1 -- -- -- --
114.45 0.501 14.1 0.597 0.685 -- -- -- -0.0271 11.8 -- -- -- --
123.08 0.519 14.1 0.663 -- -0.617 -- -- -0.143 -- 83.19 10 -- --
111.24 0.491 14.1 -- 0.657 -1.88 -- -- -0.138 11 94.9 67 -- --
143.99 0.561 14.1 0.577 -- -- -- -- -0.0358 -- -- -- -- --
123.85 0.521 14.1 -- 0.678 -- -- -- -0.0937 11.7 -- -- -- --
134.31 0.542 14.2 -- -- -0.568 -- -- -0.201 -- 82 3 -- --
152.77 0.577 14.1 -- -- -- -- -- -0.0999 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 82.41 atmosphere 1010.0 270 < th dose dependent rect. 23 4
2 82.56 atmosphere 1010.0 270 < th dose dependent rect. 1 1
3 82.66 atmosphere 1010.0 10 < th dose dependent rect. 24 6
12 84.17 temperature 25.0 270 < th dose independent rect. 23 4
29 86.19 wind 1.0 270 < th dose independent rect. 23 3
31 86.33 temperature 25.0 270 < th dose independent rect. 22 6
40 86.86 precipitation 0.1 270 < th dose independent rect. 2 23
41 86.86 precipitation 0.1 270 < th dose dependent rect. 2 23
42 87.05 humidity 70.0 30 > th dose dependent rect. 1 5
43 87.10 temperature 20.0 30 > th dose independent rect. 1 5
45 87.16 wind 1.0 30 > th dose independent rect. 6 19
52 87.28 wind 1.0 270 < th dose dependent rect. 24 1
85 88.53 atmosphere 1000.0 30 > th dose independent rect. 1 5
86 88.54 humidity 70.0 270 > th dose dependent rect. 22 6
93 88.74 humidity 70.0 270 > th dose dependent rect. 1 1
97 88.79 humidity 70.0 270 > th dose dependent rect. 23 4
100 88.85 temperature 25.0 270 < th dose independent rect. 1 1
103 88.93 radiation 20.0 30 < th dose dependent rect. 1 5
126 89.34 humidity 90.0 30 > th dose independent rect. 24 6
131 89.39 precipitation 0.1 30 < th dose independent rect. 6 19
132 89.39 precipitation 0.1 30 < th dose dependent rect. 6 19
142 89.51 atmosphere 1000.0 270 > th dose independent rect. 1 1
145 89.52 temperature 30.0 10 < th dose dependent rect. 1 5
157 89.70 temperature 10.0 30 > th dose independent rect. 1 5
160 89.70 humidity 50.0 30 > th dose independent rect. 1 5
164 89.70 atmosphere 1010.0 30 < th dose independent rect. 1 5
166 89.70 radiation 20.0 30 < th dose independent rect. 1 5
169 89.70 temperature 10.0 30 > th dose independent rect. 6 19
171 89.71 wind 9.0 10 < th dose independent rect. 1 5
188 89.73 wind 9.0 1440 < th dose independent rect. 2 5
189 89.73 temperature 10.0 1440 > th dose independent rect. 2 5
192 89.73 temperature 30.0 1440 < th dose independent rect. 2 5
196 89.73 humidity 50.0 1440 > th dose independent rect. 2 5
201 89.73 atmosphere 995.0 1440 > th dose independent rect. 2 5
202 89.73 radiation 40.0 1440 < th dose independent rect. 2 5
206 89.73 temperature 10.0 1440 > th dose independent rect. 7 19
212 89.96 temperature 20.0 270 > th dose independent rect. 1 1
213 89.97 atmosphere 1000.0 270 > th dose independent rect. 23 5
214 89.97 radiation 1.0 30 < th dose independent rect. 1 5
217 90.01 wind 1.0 270 < th dose dependent rect. 23 3
221 90.08 atmosphere 995.0 30 > th dose independent rect. 6 19
227 90.12 temperature 30.0 270 < th dose dependent rect. 1 1
237 90.29 precipitation 0.1 270 < th dose independent rect. 4 19
238 90.29 precipitation 0.1 270 < th dose dependent rect. 4 19
244 90.35 humidity 90.0 720 > th dose dependent rect. 20 1
252 90.42 humidity 80.0 270 > th dose independent rect. 1 1
253 90.44 precipitation 0.1 270 < th dose independent rect. 1 1
254 90.44 precipitation 0.1 270 < th dose dependent rect. 1 1
255 90.45 atmosphere 1005.0 270 < th dose independent rect. 22 5
256 90.46 precipitation 0.1 30 < th dose independent rect. 1 5
257 90.46 precipitation 0.1 30 < th dose dependent rect. 1 5
261 90.53 temperature 10.0 270 > th dose independent rect. 1 1
264 90.53 humidity 50.0 270 > th dose independent rect. 1 1
268 90.53 atmosphere 1010.0 270 < th dose independent rect. 1 1
270 90.53 radiation 1.0 270 < th dose independent rect. 1 1
275 90.53 temperature 10.0 270 > th dose independent rect. 2 23
276 90.53 radiation 1.0 270 < th dose dependent rect. 1 1
281 90.55 wind 9.0 30 < th dose independent rect. 6 19
286 90.58 humidity 50.0 30 > th dose independent rect. 6 19
293 90.64 wind 9.0 270 < th dose independent rect. 1 1
298 90.70 atmosphere 1005.0 270 < th dose independent rect. 23 3
319 90.81 precipitation 0.1 270 < th dose independent rect. 3 21
320 90.81 precipitation 0.1 270 < th dose dependent rect. 3 21
353 91.15 temperature 30.0 270 < th dose dependent rect. 24 3
356 91.18 precipitation 0.1 270 > th dose dependent rect. 2 2
358 91.19 precipitation 0.1 270 > th dose independent rect. 2 2
367 91.25 humidity 50.0 270 > th dose independent rect. 23 5
376 91.25 temperature 10.0 270 > th dose independent rect. 4 19
383 91.27 humidity 90.0 270 > th dose dependent rect. 18 9
385 91.29 wind 9.0 270 < th dose independent rect. 23 5
396 91.35 atmosphere 1000.0 270 > th dose independent rect. 24 3
432 91.59 atmosphere 1015.0 30 < th dose independent rect. 6 19
461 91.78 precipitation 0.1 270 < th dose independent rect. 23 5
463 91.78 precipitation 0.1 270 < th dose dependent rect. 23 5
496 91.96 humidity 50.0 270 > th dose independent rect. 4 19
528 92.05 wind 9.0 270 < th dose independent rect. 4 19
532 92.10 radiation 1.0 1440 < th dose independent rect. 11 1
535 92.10 radiation 1.0 1440 < th dose dependent rect. 11 1
558 92.26 humidity 50.0 270 > th dose independent rect. 24 3
562 92.26 radiation 1.0 270 < th dose independent rect. 24 3
567 92.26 temperature 10.0 270 > th dose independent rect. 3 21
568 92.26 radiation 1.0 270 < th dose dependent rect. 24 3
577 92.28 atmosphere 995.0 270 > th dose independent rect. 4 19
579 92.30 temperature 10.0 30 > th dose dependent rect. 1 5
580 92.31 wind 9.0 270 < th dose independent rect. 24 3
581 92.31 precipitation 0.1 270 < th dose independent rect. 24 3
582 92.31 precipitation 0.1 270 < th dose dependent rect. 24 3
613 92.44 atmosphere 1005.0 720 < th dose independent rect. 18 7
619 92.46 wind 1.0 30 > th dose independent rect. 1 5
650 92.66 atmosphere 1005.0 720 < th dose independent rect. 19 2
699 92.89 atmosphere 1005.0 720 < th dose independent rect. 18 5
705 92.90 wind 1.0 270 > th dose independent rect. 3 21
727 93.01 wind 1.0 270 < th dose independent rect. 17 9
735 93.05 wind 9.0 270 < th dose dependent rect. 1 1
741 93.09 atmosphere 995.0 270 > th dose independent rect. 2 23
774 93.28 atmosphere 995.0 270 > th dose independent rect. 3 21
779 93.31 radiation 1.0 90 > th dose independent sin 5 NA
785 93.34 humidity 80.0 10 > th dose dependent rect. 1 9
789 93.35 humidity 90.0 720 < th dose independent rect. 20 2
849 93.46 radiation 1.0 90 < th dose dependent sin 5 NA
856 93.47 radiation 1.0 90 < th dose independent sin 5 NA
883 93.49 atmosphere 1015.0 270 < th dose independent rect. 4 19
886 93.50 temperature 10.0 270 > th dose dependent rect. 1 1
906 93.58 wind 9.0 270 < th dose independent rect. 3 21
933 93.62 wind 9.0 30 < th dose dependent rect. 1 5
947 93.68 temperature 30.0 30 < th dose independent rect. 6 19
956 93.71 precipitation 0.1 30 < th dose independent sin 3 NA
957 93.71 precipitation 0.1 30 < th dose dependent sin 3 NA