Os09g0460100
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os09g0460100 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 67.47 | 0.386 | 11.6 | -2.45 | 0.639 | -2.02 | 0.36 | 2.44 | -0.306 | 5.18 | 31.97 | 826 | -- | -- |
| 73.78 | 0.4 | 11.5 | -2 | 0.6 | -2.08 | 0.424 | -- | -0.185 | 5.43 | 48.63 | 871 | -- | -- |
| 67.76 | 0.383 | 11.6 | -2.45 | 0.653 | -2.02 | -- | 2.35 | -0.31 | 5.26 | 31.35 | 810 | -- | -- |
| 72.49 | 0.397 | 11.5 | -2 | 0.649 | -2.02 | -- | -- | -0.249 | 5.32 | 29.57 | 809 | -- | -- |
| 77.99 | 0.411 | 11.6 | -2.55 | -- | -2.03 | -- | 2.62 | -0.315 | -- | 38.92 | 1134 | -- | -- |
| 128.98 | 0.532 | 11.4 | -1.43 | 0.606 | -- | 0.205 | -- | 0.166 | 2.65 | -- | -- | -- | -- |
| 129.12 | 0.532 | 11.4 | -1.43 | 0.607 | -- | -- | -- | 0.165 | 2.64 | -- | -- | -- | -- |
| 83.83 | 0.426 | 11.5 | -2 | -- | -1.99 | -- | -- | -0.17 | -- | 37.1 | 1140 | -- | -- |
| 162.19 | 0.596 | 11.4 | -- | 0.968 | -1.17 | -- | -- | 0.123 | 2.42 | 29.5 | 636 | -- | -- |
| 150.63 | 0.573 | 11.4 | -1.41 | -- | -- | -- | -- | 0.18 | -- | -- | -- | -- | -- |
| 183.3 | 0.633 | 11.4 | -- | 0.579 | -- | -- | -- | 0.325 | 2.61 | -- | -- | -- | -- |
| 176.59 | 0.619 | 11.4 | -- | -- | -1.18 | -- | -- | 0.172 | -- | 37.03 | 1091 | -- | -- |
| 202.91 | 0.665 | 11.4 | -- | -- | -- | -- | -- | 0.337 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 64.18 | temperature | 10 | 1440 | > th | dose dependent | rect. | 11 | 3 |
| 6 | 64.71 | temperature | 10 | 1440 | > th | dose dependent | rect. | 11 | 8 |
| 43 | 65.37 | temperature | 30 | 720 | < th | dose dependent | rect. | 5 | 21 |
| 56 | 65.78 | wind | 7 | 43200 | > th | dose dependent | rect. | 17 | 4 |
| 61 | 65.83 | temperature | 30 | 1440 | < th | dose dependent | rect. | 11 | 10 |
| 82 | 66.06 | temperature | 10 | 1440 | > th | dose dependent | sin | 21 | NA |
| 173 | 66.80 | temperature | 30 | 720 | < th | dose dependent | rect. | 1 | 23 |
| 174 | 66.82 | temperature | 30 | 1440 | < th | dose dependent | sin | 20 | NA |
| 180 | 66.85 | wind | 7 | 43200 | > th | dose independent | rect. | 17 | 4 |
| 191 | 66.89 | temperature | 30 | 1440 | < th | dose dependent | rect. | 11 | 3 |
| 195 | 66.89 | temperature | 30 | 720 | < th | dose dependent | rect. | 9 | 22 |
| 209 | 67.00 | wind | 7 | 43200 | < th | dose independent | rect. | 17 | 4 |
| 265 | 67.28 | temperature | 10 | 1440 | > th | dose dependent | rect. | 17 | 1 |
| 331 | 67.60 | temperature | 30 | 1440 | < th | dose dependent | rect. | 15 | 5 |
| 344 | 67.65 | wind | 5 | 43200 | > th | dose dependent | rect. | 15 | 10 |
| 366 | 67.72 | temperature | 10 | 720 | > th | dose dependent | rect. | 7 | 23 |
| 369 | 67.73 | temperature | 30 | 1440 | < th | dose dependent | rect. | 17 | 1 |
| 388 | 67.79 | wind | 5 | 43200 | > th | dose dependent | rect. | 15 | 7 |
| 398 | 67.82 | wind | 9 | 43200 | > th | dose dependent | rect. | 17 | 6 |
| 437 | 67.97 | temperature | 10 | 720 | > th | dose dependent | rect. | 24 | 23 |
| 438 | 67.98 | temperature | 30 | 720 | < th | dose dependent | no | NA | NA |
| 469 | 68.11 | temperature | 10 | 720 | > th | dose dependent | rect. | 17 | 23 |
| 478 | 68.15 | temperature | 15 | 720 | > th | dose dependent | rect. | 2 | 23 |
| 501 | 68.22 | temperature | 15 | 720 | > th | dose dependent | rect. | 2 | 21 |
| 503 | 68.22 | temperature | 10 | 720 | > th | dose dependent | rect. | 15 | 23 |
| 509 | 68.26 | wind | 9 | 43200 | < th | dose independent | rect. | 19 | 2 |
| 569 | 68.49 | wind | 5 | 43200 | > th | dose independent | rect. | 16 | 9 |
| 575 | 68.50 | temperature | 10 | 720 | > th | dose dependent | no | NA | NA |
| 580 | 68.51 | wind | 5 | 43200 | > th | dose independent | rect. | 16 | 7 |
| 609 | 68.61 | wind | 5 | 43200 | > th | dose dependent | sin | 15 | NA |
| 627 | 68.67 | wind | 7 | 43200 | < th | dose independent | rect. | 15 | 10 |
| 655 | 68.75 | wind | 7 | 43200 | < th | dose independent | rect. | 14 | 14 |
| 660 | 68.76 | wind | 7 | 43200 | > th | dose independent | rect. | 14 | 17 |
| 663 | 68.77 | wind | 7 | 43200 | > th | dose independent | rect. | 14 | 14 |
| 668 | 68.77 | temperature | 10 | 720 | > th | dose dependent | rect. | 13 | 23 |
| 673 | 68.79 | wind | 7 | 43200 | < th | dose independent | rect. | 15 | 6 |
| 690 | 68.85 | wind | 7 | 43200 | < th | dose independent | rect. | 14 | 17 |
| 702 | 68.88 | temperature | 30 | 30 | < th | dose dependent | rect. | 19 | 23 |
| 712 | 68.90 | temperature | 15 | 720 | > th | dose dependent | rect. | 11 | 23 |
| 777 | 69.08 | temperature | 10 | 720 | > th | dose dependent | rect. | 22 | 23 |
| 841 | 69.24 | temperature | 30 | 720 | < th | dose dependent | rect. | 23 | 23 |
| 864 | 69.29 | temperature | 30 | 720 | < th | dose dependent | rect. | 19 | 23 |
| 903 | 69.41 | wind | 7 | 43200 | < th | dose independent | sin | 15 | NA |
| 945 | 69.51 | wind | 7 | 43200 | > th | dose independent | sin | 15 | NA |
| 978 | 69.59 | wind | 9 | 43200 | > th | dose independent | rect. | 17 | 8 |