Os09g0459500
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Hypothetical protein.
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Os09g0459500 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 54.84 | 0.348 | 10.8 | 0.759 | 0.139 | 1.12 | 0.659 | -4.37 | 0.555 | 9.81 | 17.5 | 2823 | -- | -- |
| 72.18 | 0.396 | 10.7 | 1.72 | 0.0799 | 1.34 | 0.807 | -- | 0.731 | 11.4 | 8.92 | 8449 | -- | -- |
| 56.15 | 0.349 | 10.8 | 0.779 | 0.175 | 1.13 | -- | -4.48 | 0.554 | 8.45 | 17.4 | 2670 | -- | -- |
| 74.03 | 0.401 | 10.7 | 1.78 | 0.212 | 1.33 | -- | -- | 0.72 | 7.29 | 11.31 | 8018 | -- | -- |
| 57.59 | 0.353 | 10.8 | 0.782 | -- | 1.11 | -- | -4.41 | 0.558 | -- | 17.4 | 2801 | -- | -- |
| 101.5 | 0.472 | 10.6 | 2.45 | 0.087 | -- | -0.781 | -- | 1.12 | 2.33 | -- | -- | -- | -- |
| 102.52 | 0.474 | 10.6 | 2.47 | 0.179 | -- | -- | -- | 1.13 | 6.09 | -- | -- | -- | -- |
| 75.31 | 0.404 | 10.7 | 1.77 | -- | 1.33 | -- | -- | 0.725 | -- | 11.9 | 8558 | -- | -- |
| 99.68 | 0.465 | 10.8 | -- | 0.177 | 2.12 | -- | -- | 0.244 | 7.19 | 3.702 | 41406 | -- | -- |
| 104.17 | 0.477 | 10.6 | 2.47 | -- | -- | -- | -- | 1.13 | -- | -- | -- | -- | -- |
| 262.78 | 0.758 | 10.6 | -- | 0.217 | -- | -- | -- | 0.852 | 5.51 | -- | -- | -- | -- |
| 101.27 | 0.469 | 10.8 | -- | -- | 2.12 | -- | -- | 0.245 | -- | 7.848 | 41634 | -- | -- |
| 265.23 | 0.76 | 10.6 | -- | -- | -- | -- | -- | 0.856 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 52.10 | temperature | 25 | 1440 | < th | dose dependent | rect. | 20 | 10 |
| 3 | 52.12 | temperature | 15 | 1440 | > th | dose dependent | rect. | 20 | 10 |
| 4 | 52.14 | temperature | 25 | 1440 | < th | dose dependent | rect. | 3 | 2 |
| 6 | 52.18 | temperature | 15 | 1440 | > th | dose dependent | rect. | 4 | 1 |
| 53 | 52.59 | temperature | 15 | 1440 | > th | dose dependent | rect. | 1 | 5 |
| 201 | 53.35 | temperature | 25 | 1440 | < th | dose dependent | rect. | 21 | 1 |
| 211 | 53.39 | temperature | 25 | 1440 | < th | dose dependent | sin | 11 | NA |
| 218 | 53.40 | temperature | 20 | 720 | > th | dose dependent | rect. | 18 | 18 |
| 219 | 53.41 | temperature | 15 | 1440 | > th | dose dependent | rect. | 21 | 1 |
| 222 | 53.42 | temperature | 15 | 1440 | > th | dose dependent | sin | 11 | NA |
| 315 | 53.84 | temperature | 20 | 4320 | > th | dose independent | rect. | 21 | 2 |
| 388 | 54.16 | temperature | 20 | 1440 | < th | dose independent | rect. | 5 | 1 |
| 417 | 54.31 | temperature | 20 | 4320 | > th | dose independent | rect. | 19 | 5 |
| 443 | 54.42 | temperature | 20 | 1440 | > th | dose independent | rect. | 5 | 1 |
| 449 | 54.44 | temperature | 20 | 4320 | < th | dose independent | rect. | 21 | 2 |
| 603 | 55.08 | temperature | 20 | 4320 | < th | dose independent | rect. | 19 | 5 |
| 644 | 55.27 | temperature | 20 | 1440 | < th | dose independent | rect. | 3 | 4 |
| 650 | 55.29 | temperature | 25 | 4320 | < th | dose independent | rect. | 11 | 2 |
| 666 | 55.35 | temperature | 20 | 1440 | < th | dose independent | rect. | 21 | 9 |
| 688 | 55.41 | temperature | 20 | 1440 | > th | dose independent | rect. | 4 | 3 |
| 707 | 55.48 | temperature | 20 | 1440 | > th | dose independent | rect. | 21 | 10 |
| 753 | 55.60 | temperature | 20 | 4320 | > th | dose dependent | rect. | 9 | 1 |
| 808 | 55.82 | temperature | 20 | 1440 | > th | dose independent | rect. | 21 | 13 |
| 814 | 55.85 | temperature | 25 | 4320 | < th | dose independent | rect. | 10 | 4 |
| 850 | 55.96 | temperature | 20 | 1440 | < th | dose independent | rect. | 21 | 13 |
| 874 | 56.01 | temperature | 20 | 1440 | > th | dose independent | sin | 9 | NA |
| 887 | 56.05 | temperature | 20 | 4320 | > th | dose dependent | rect. | 6 | 17 |
| 890 | 56.07 | temperature | 25 | 4320 | > th | dose independent | rect. | 11 | 3 |
| 932 | 56.15 | temperature | 20 | 1440 | < th | dose independent | sin | 9 | NA |
| 934 | 56.15 | temperature | 20 | 4320 | > th | dose dependent | rect. | 15 | 7 |
| 978 | 56.22 | temperature | 20 | 4320 | > th | dose dependent | rect. | 17 | 2 |