Os09g0458700
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Calcium-binding EF-hand domain containing protein.
FiT-DB / Search/ Help/ Sample detail
|
Os09g0458700 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Calcium-binding EF-hand domain containing protein.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 59.52 | 0.362 | 6.21 | 0.702 | 0.975 | 1.14 | -0.371 | 0.835 | 0.0126 | 11.3 | 22.56 | 37 | -- | -- |
| 60.18 | 0.364 | 6.2 | 0.781 | 0.969 | 0.998 | -0.571 | -- | 0.0255 | 11.2 | 22.56 | 37 | -- | -- |
| 60.03 | 0.361 | 6.21 | 0.674 | 0.976 | 1.15 | -- | 1.05 | 0.00556 | 11.3 | 22.66 | 37 | -- | -- |
| 61.56 | 0.368 | 6.2 | 0.756 | 0.971 | 0.979 | -- | -- | 0.0232 | 11.2 | 22.66 | 37 | -- | -- |
| 92.94 | 0.449 | 6.22 | 0.972 | -- | 1.27 | -- | 0.149 | 0.18 | -- | 31.26 | 848 | -- | -- |
| 71.61 | 0.397 | 6.23 | 0.587 | 0.844 | -- | -0.516 | -- | -0.0932 | 11 | -- | -- | -- | -- |
| 72.72 | 0.399 | 6.23 | 0.566 | 0.847 | -- | -- | -- | -0.0953 | 10.9 | -- | -- | -- | -- |
| 91.95 | 0.447 | 6.21 | 0.888 | -- | 1.26 | -- | -- | 0.107 | -- | 32.8 | 831 | -- | -- |
| 75.43 | 0.407 | 6.23 | -- | 0.926 | 0.673 | -- | -- | -0.0913 | 11.1 | 22.66 | 37 | -- | -- |
| 117.32 | 0.506 | 6.25 | 0.548 | -- | -- | -- | -- | -0.101 | -- | -- | -- | -- | -- |
| 81.16 | 0.421 | 6.25 | -- | 0.843 | -- | -- | -- | -0.158 | 10.9 | -- | -- | -- | -- |
| 110.4 | 0.489 | 6.24 | -- | -- | 0.915 | -- | -- | -0.0462 | -- | 36.19 | 806 | -- | -- |
| 125.23 | 0.522 | 6.27 | -- | -- | -- | -- | -- | -0.162 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 59.38 | temperature | 30 | 270 | < th | dose dependent | rect. | 10 | 21 |
| 2 | 59.44 | temperature | 30 | 270 | < th | dose dependent | rect. | 17 | 13 |
| 4 | 59.49 | temperature | 30 | 270 | < th | dose dependent | rect. | 11 | 19 |
| 6 | 59.57 | temperature | 30 | 30 | < th | dose dependent | rect. | 3 | 23 |
| 15 | 59.84 | temperature | 30 | 270 | < th | dose dependent | rect. | 13 | 17 |
| 33 | 60.17 | temperature | 25 | 90 | < th | dose dependent | rect. | 18 | 23 |
| 34 | 60.19 | temperature | 30 | 270 | < th | dose dependent | sin | 12 | NA |
| 83 | 60.55 | temperature | 25 | 90 | < th | dose dependent | rect. | 7 | 23 |
| 86 | 60.57 | temperature | 25 | 90 | < th | dose dependent | no | NA | NA |
| 91 | 60.60 | temperature | 20 | 90 | > th | dose independent | rect. | 6 | 23 |
| 92 | 60.60 | temperature | 25 | 90 | < th | dose dependent | rect. | 15 | 23 |
| 101 | 60.62 | temperature | 25 | 90 | < th | dose dependent | rect. | 21 | 23 |
| 124 | 60.70 | temperature | 10 | 270 | > th | dose dependent | rect. | 6 | 22 |
| 133 | 60.73 | temperature | 25 | 90 | < th | dose dependent | rect. | 1 | 23 |
| 155 | 60.82 | temperature | 25 | 90 | < th | dose dependent | rect. | 18 | 17 |
| 194 | 60.95 | temperature | 25 | 30 | < th | dose dependent | rect. | 23 | 23 |
| 232 | 61.06 | temperature | 10 | 270 | > th | dose dependent | sin | 11 | NA |
| 256 | 61.13 | temperature | 25 | 30 | < th | dose dependent | rect. | 5 | 23 |
| 334 | 61.35 | temperature | 25 | 720 | < th | dose dependent | rect. | 18 | 3 |
| 340 | 61.37 | temperature | 25 | 720 | < th | dose dependent | rect. | 19 | 1 |
| 349 | 61.39 | temperature | 20 | 10 | > th | dose independent | rect. | 1 | 23 |
| 367 | 61.44 | temperature | 10 | 720 | > th | dose dependent | rect. | 15 | 8 |
| 372 | 61.45 | temperature | 20 | 90 | < th | dose independent | rect. | 18 | 22 |
| 378 | 61.46 | temperature | 10 | 270 | > th | dose dependent | rect. | 16 | 23 |
| 392 | 61.50 | temperature | 20 | 10 | > th | dose independent | rect. | 7 | 22 |
| 397 | 61.51 | temperature | 10 | 720 | > th | dose dependent | rect. | 15 | 12 |
| 431 | 61.59 | temperature | 20 | 90 | < th | dose independent | rect. | 11 | 21 |
| 455 | 61.63 | temperature | 20 | 90 | > th | dose independent | rect. | 1 | 23 |
| 475 | 61.66 | temperature | 20 | 270 | > th | dose dependent | rect. | 17 | 10 |
| 494 | 61.68 | temperature | 10 | 720 | > th | dose dependent | rect. | 11 | 16 |
| 526 | 61.74 | temperature | 20 | 90 | > th | dose independent | no | NA | NA |
| 528 | 61.74 | temperature | 25 | 90 | < th | dose dependent | rect. | 21 | 10 |
| 534 | 61.75 | temperature | 20 | 90 | < th | dose independent | rect. | 21 | 23 |
| 567 | 61.79 | temperature | 15 | 10 | > th | dose dependent | rect. | 7 | 22 |
| 589 | 61.83 | temperature | 20 | 90 | < th | dose independent | rect. | 13 | 23 |
| 594 | 61.84 | temperature | 20 | 90 | < th | dose independent | no | NA | NA |
| 606 | 61.85 | radiation | 10 | 4320 | > th | dose dependent | rect. | 16 | 15 |
| 634 | 61.88 | temperature | 20 | 90 | < th | dose independent | rect. | 18 | 18 |
| 691 | 61.93 | temperature | 20 | 90 | < th | dose independent | rect. | 18 | 14 |
| 701 | 61.94 | temperature | 10 | 720 | > th | dose dependent | sin | 18 | NA |
| 734 | 61.97 | temperature | 20 | 90 | < th | dose independent | rect. | 1 | 23 |
| 761 | 61.99 | temperature | 20 | 10 | < th | dose independent | rect. | 19 | 22 |
| 762 | 61.99 | temperature | 20 | 90 | < th | dose independent | rect. | 7 | 23 |
| 821 | 62.04 | temperature | 20 | 90 | < th | dose independent | rect. | 3 | 23 |
| 889 | 62.10 | temperature | 20 | 90 | > th | dose independent | rect. | 17 | 23 |
| 890 | 62.10 | temperature | 20 | 90 | > th | dose independent | rect. | 21 | 23 |
| 907 | 62.11 | temperature | 15 | 90 | > th | dose dependent | rect. | 11 | 17 |
| 911 | 62.12 | temperature | 20 | 90 | < th | dose independent | sin | 9 | NA |
| 960 | 62.17 | temperature | 15 | 10 | > th | dose dependent | rect. | 1 | 23 |
| 992 | 62.21 | temperature | 20 | 10 | < th | dose independent | rect. | 11 | 22 |
| 994 | 62.21 | temperature | 20 | 10 | > th | dose independent | rect. | 17 | 23 |