Os09g0458600
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os09g0458600 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 204.61 | 0.672 | 5.4 | 0.652 | 0.606 | -0.228 | -0.144 | -2.62 | 0.487 | 8.19 | 51 | 9190 | -- | -- |
| 212.76 | 0.679 | 5.4 | 0.81 | 0.621 | -0.96 | 0.403 | -- | 0.427 | 7.56 | 46 | 7140 | -- | -- |
| 204.67 | 0.666 | 5.4 | 0.649 | 0.608 | -0.228 | -- | -2.61 | 0.488 | 8.11 | 51.3 | 9194 | -- | -- |
| 211.76 | 0.678 | 5.4 | 0.817 | 0.612 | -1.01 | -- | -- | 0.464 | 8.05 | 46 | 6697 | -- | -- |
| 224.84 | 0.698 | 5.42 | 0.658 | -- | -0.28 | -- | -2.56 | 0.498 | -- | 51.96 | 9203 | -- | -- |
| 227 | 0.706 | 5.38 | 0.511 | 0.606 | -- | -0.026 | -- | 0.497 | 8.25 | -- | -- | -- | -- |
| 227 | 0.706 | 5.38 | 0.51 | 0.606 | -- | -- | -- | 0.497 | 8.23 | -- | -- | -- | -- |
| 231.18 | 0.708 | 5.41 | 0.82 | -- | -1.03 | -- | -- | 0.462 | -- | 45.39 | 6710 | -- | -- |
| 217.15 | 0.686 | 5.4 | -- | 0.622 | -0.996 | -- | -- | 0.427 | 8.12 | 39 | 13810 | -- | -- |
| 247.27 | 0.735 | 5.4 | 0.515 | -- | -- | -- | -- | 0.503 | -- | -- | -- | -- | -- |
| 233.86 | 0.715 | 5.4 | -- | 0.609 | -- | -- | -- | 0.44 | 8.17 | -- | -- | -- | -- |
| 235.55 | 0.715 | 5.4 | -- | -- | -1.04 | -- | -- | 0.386 | -- | 39 | 13805 | -- | -- |
| 254.26 | 0.744 | 5.41 | -- | -- | -- | -- | -- | 0.446 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 200.11 | temperature | 20.0 | 720 | > th | dose independent | rect. | 3 | 12 |
| 2 | 200.18 | temperature | 25.0 | 720 | < th | dose dependent | rect. | 6 | 1 |
| 3 | 200.19 | temperature | 15.0 | 720 | > th | dose dependent | rect. | 4 | 2 |
| 6 | 200.72 | temperature | 20.0 | 720 | > th | dose independent | rect. | 3 | 8 |
| 8 | 201.00 | temperature | 15.0 | 720 | > th | dose dependent | rect. | 3 | 8 |
| 40 | 203.01 | temperature | 20.0 | 720 | > th | dose independent | rect. | 5 | 1 |
| 55 | 204.18 | temperature | 10.0 | 720 | > th | dose dependent | rect. | 3 | 12 |
| 67 | 204.58 | temperature | 20.0 | 720 | > th | dose dependent | rect. | 8 | 2 |
| 75 | 204.77 | atmosphere | 1015.0 | 4320 | < th | dose independent | rect. | 19 | 1 |
| 76 | 204.78 | temperature | 20.0 | 720 | > th | dose independent | rect. | 3 | 3 |
| 85 | 204.96 | atmosphere | 1015.0 | 4320 | > th | dose dependent | rect. | 12 | 8 |
| 88 | 205.03 | atmosphere | 1015.0 | 4320 | > th | dose independent | rect. | 12 | 8 |
| 96 | 205.10 | atmosphere | 1015.0 | 4320 | < th | dose independent | rect. | 13 | 7 |
| 97 | 205.10 | wind | 1.0 | 14400 | < th | dose dependent | rect. | 6 | 1 |
| 120 | 205.34 | atmosphere | 1015.0 | 4320 | > th | dose independent | rect. | 13 | 3 |
| 121 | 205.36 | atmosphere | 1015.0 | 4320 | > th | dose independent | rect. | 14 | 1 |
| 122 | 205.36 | atmosphere | 1015.0 | 4320 | > th | dose dependent | rect. | 13 | 3 |
| 124 | 205.42 | atmosphere | 1015.0 | 4320 | < th | dose independent | rect. | 13 | 3 |
| 169 | 205.78 | precipitation | 0.1 | 720 | < th | dose independent | rect. | 3 | 17 |
| 170 | 205.78 | precipitation | 0.1 | 720 | < th | dose dependent | rect. | 3 | 17 |
| 179 | 205.92 | temperature | 20.0 | 720 | > th | dose independent | sin | 3 | NA |
| 186 | 205.98 | temperature | 15.0 | 720 | > th | dose dependent | sin | 5 | NA |
| 201 | 206.22 | wind | 1.0 | 14400 | < th | dose independent | rect. | 6 | 1 |
| 214 | 206.40 | wind | 1.0 | 14400 | > th | dose independent | rect. | 6 | 1 |
| 216 | 206.42 | wind | 3.0 | 1440 | < th | dose independent | rect. | 5 | 1 |
| 232 | 206.59 | temperature | 20.0 | 720 | < th | dose independent | rect. | 5 | 8 |
| 235 | 206.61 | temperature | 25.0 | 720 | < th | dose dependent | rect. | 3 | 8 |
| 243 | 206.68 | temperature | 20.0 | 720 | < th | dose independent | rect. | 6 | 1 |
| 249 | 206.78 | temperature | 20.0 | 720 | < th | dose independent | rect. | 5 | 6 |
| 253 | 206.80 | temperature | 25.0 | 720 | < th | dose dependent | rect. | 3 | 6 |
| 261 | 206.87 | temperature | 20.0 | 720 | < th | dose dependent | rect. | 3 | 4 |
| 264 | 206.89 | wind | 3.0 | 1440 | > th | dose independent | rect. | 5 | 1 |
| 274 | 206.93 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 3 | 19 |
| 290 | 207.01 | humidity | 50.0 | 4320 | > th | dose independent | rect. | 12 | 1 |
| 314 | 207.17 | temperature | 20.0 | 720 | < th | dose dependent | rect. | 2 | 14 |
| 350 | 207.42 | temperature | 10.0 | 90 | > th | dose dependent | rect. | 3 | 22 |
| 371 | 207.53 | temperature | 25.0 | 720 | < th | dose dependent | sin | 4 | NA |
| 377 | 207.55 | wind | 1.0 | 14400 | > th | dose independent | rect. | 5 | 9 |
| 389 | 207.60 | radiation | 1.0 | 43200 | < th | dose dependent | rect. | 23 | 5 |
| 423 | 207.79 | atmosphere | 1010.0 | 90 | < th | dose independent | rect. | 4 | 7 |
| 427 | 207.81 | wind | 1.0 | 14400 | < th | dose independent | rect. | 5 | 9 |
| 461 | 207.96 | precipitation | 0.1 | 720 | < th | dose independent | rect. | 18 | 16 |
| 465 | 207.96 | precipitation | 0.1 | 720 | < th | dose dependent | rect. | 18 | 16 |
| 480 | 208.05 | atmosphere | 1015.0 | 4320 | > th | dose dependent | rect. | 3 | 1 |
| 525 | 208.24 | wind | 1.0 | 14400 | < th | dose dependent | rect. | 5 | 9 |
| 533 | 208.27 | wind | 9.0 | 4320 | < th | dose independent | rect. | 10 | 3 |
| 539 | 208.28 | wind | 1.0 | 720 | < th | dose dependent | rect. | 6 | 1 |
| 566 | 208.39 | temperature | 15.0 | 90 | > th | dose independent | rect. | 3 | 22 |
| 582 | 208.44 | wind | 1.0 | 14400 | < th | dose independent | rect. | 5 | 6 |
| 586 | 208.45 | humidity | 90.0 | 4320 | > th | dose independent | rect. | 8 | 1 |
| 599 | 208.49 | wind | 7.0 | 4320 | < th | dose independent | rect. | 22 | 3 |
| 619 | 208.55 | wind | 1.0 | 14400 | < th | dose dependent | rect. | 1 | 8 |
| 655 | 208.68 | temperature | 10.0 | 720 | > th | dose dependent | rect. | 8 | 7 |
| 667 | 208.72 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 3 | 1 |
| 668 | 208.72 | temperature | 20.0 | 10 | > th | dose dependent | rect. | 1 | 3 |
| 713 | 208.91 | atmosphere | 1000.0 | 14400 | < th | dose independent | rect. | 18 | 1 |
| 717 | 208.93 | wind | 9.0 | 4320 | > th | dose dependent | rect. | 11 | 2 |
| 758 | 209.05 | temperature | 20.0 | 720 | > th | dose independent | rect. | 8 | 1 |
| 762 | 209.06 | atmosphere | 1010.0 | 90 | < th | dose independent | rect. | 3 | 22 |
| 781 | 209.12 | precipitation | 0.1 | 4320 | > th | dose independent | rect. | 3 | 1 |
| 783 | 209.12 | wind | 1.0 | 14400 | > th | dose dependent | rect. | 6 | 2 |
| 793 | 209.15 | temperature | 20.0 | 720 | < th | dose independent | sin | 2 | NA |
| 795 | 209.15 | wind | 5.0 | 4320 | > th | dose dependent | rect. | 23 | 2 |
| 810 | 209.21 | wind | 1.0 | 10 | < th | dose independent | rect. | 11 | 17 |
| 816 | 209.24 | precipitation | 0.1 | 720 | < th | dose independent | rect. | 22 | 8 |
| 818 | 209.24 | precipitation | 0.1 | 720 | < th | dose dependent | rect. | 22 | 8 |
| 830 | 209.30 | wind | 7.0 | 4320 | > th | dose independent | rect. | 22 | 3 |
| 838 | 209.32 | wind | 1.0 | 10 | < th | dose independent | rect. | 13 | 15 |
| 840 | 209.33 | atmosphere | 1015.0 | 720 | < th | dose independent | rect. | 3 | 17 |
| 873 | 209.42 | wind | 1.0 | 14400 | < th | dose dependent | rect. | 1 | 1 |
| 876 | 209.44 | wind | 1.0 | 43200 | < th | dose independent | rect. | 12 | 1 |
| 904 | 209.49 | wind | 1.0 | 14400 | < th | dose dependent | rect. | 1 | 13 |
| 911 | 209.51 | wind | 1.0 | 10 | < th | dose independent | rect. | 24 | 4 |
| 935 | 209.57 | humidity | 90.0 | 4320 | < th | dose independent | rect. | 8 | 1 |
| 939 | 209.58 | atmosphere | 1010.0 | 90 | < th | dose independent | rect. | 4 | 17 |
| 948 | 209.62 | atmosphere | 1000.0 | 14400 | > th | dose independent | rect. | 18 | 1 |
| 964 | 209.66 | wind | 9.0 | 4320 | > th | dose independent | rect. | 10 | 3 |
| 985 | 209.71 | wind | 9.0 | 720 | < th | dose independent | rect. | 8 | 7 |