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Os09g0458400

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Conserved hypothetical protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 12.9 (0.0157) R2 : 0.796
β1 : -0.957 (0.0575) R2dD : 0.129 R2D : 0.0296
β2 : 1.45 (0.041) R2dC : 0.566 R2C : 0.548
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : -0.561 (0.0335) R2dN8 : 0.168 R2N8 : 0.0921
σ : 0.295
deviance : 39.71
__
_____
C
peak time of C : 17.9
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = humidity, response mode = > th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
31.85 0.265 12.9 -0.898 1.17 -0.6 -0.756 0.162 -0.653 18 88.58 286 -- --
31.89 0.263 12.9 -0.894 1.17 -0.602 -0.833 -- -0.652 18 88.64 285 -- --
32.74 0.266 12.9 -0.911 1.17 -0.549 -- 0.551 -0.647 18 86.71 304 -- --
33.47 0.269 12.9 -0.886 1.17 -0.534 -- -- -0.645 18.1 86.9 287 -- --
64.83 0.375 12.9 -0.941 -- -1.38 -- 0.831 -0.708 -- 72.04 366 -- --
38.85 0.292 12.9 -0.961 1.46 -- -0.592 -- -0.558 17.9 -- -- -- --
39.71 0.295 12.9 -0.957 1.45 -- -- -- -0.561 17.9 -- -- -- --
66.38 0.379 12.9 -0.894 -- -1.37 -- -- -0.704 -- 71.93 375 -- --
53.67 0.341 12.9 -- 1.11 -0.68 -- -- -0.572 18 86.13 321 -- --
149.09 0.571 12.9 -1 -- -- -- -- -0.594 -- -- -- -- --
63.85 0.374 12.9 -- 1.47 -- -- -- -0.454 17.8 -- -- -- --
86.04 0.432 12.9 -- -- -1.43 -- -- -0.648 -- 79.33 362 -- --
175.51 0.618 12.9 -- -- -- -- -- -0.483 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 25.45 temperature 10.0 270 > th dose dependent rect. 3 4
2 25.64 humidity 60.0 270 > th dose dependent rect. 2 6
5 25.72 precipitation 0.1 270 < th dose independent rect. 6 21
6 25.72 precipitation 0.1 270 < th dose dependent rect. 6 21
8 25.77 humidity 60.0 270 > th dose dependent rect. 3 4
21 25.95 radiation 10.0 270 < th dose independent rect. 3 4
27 26.10 wind 9.0 270 < th dose dependent rect. 3 4
28 26.10 radiation 20.0 270 < th dose dependent rect. 3 4
33 26.13 atmosphere 1010.0 270 < th dose independent rect. 3 4
40 26.26 radiation 20.0 270 < th dose independent rect. 2 6
42 26.30 radiation 40.0 270 < th dose dependent rect. 16 15
43 26.31 radiation 40.0 270 < th dose dependent rect. 2 6
59 26.47 humidity 70.0 270 > th dose independent rect. 3 4
60 26.48 wind 9.0 270 < th dose independent rect. 7 20
68 26.56 wind 9.0 270 < th dose independent rect. 3 4
69 26.56 temperature 10.0 270 > th dose independent rect. 3 4
72 26.56 temperature 30.0 270 < th dose independent rect. 3 4
73 26.56 humidity 50.0 270 > th dose independent rect. 3 4
75 26.56 atmosphere 995.0 270 > th dose independent rect. 3 4
78 26.56 temperature 10.0 270 > th dose independent rect. 7 20
104 26.66 precipitation 0.1 270 < th dose independent rect. 3 4
105 26.66 wind 7.0 270 < th dose independent rect. 21 5
107 26.66 precipitation 0.1 270 < th dose dependent rect. 3 4
121 26.67 precipitation 0.1 270 < th dose independent rect. 21 5
122 26.67 radiation 1.0 270 < th dose independent rect. 3 16
127 26.67 precipitation 0.1 270 < th dose dependent rect. 21 5
128 26.70 radiation 20.0 270 < th dose independent rect. 16 15
130 26.71 atmosphere 1015.0 270 < th dose independent rect. 2 19
140 26.74 temperature 10.0 270 > th dose independent rect. 21 5
141 26.74 temperature 30.0 270 < th dose independent rect. 21 5
142 26.74 humidity 50.0 270 > th dose independent rect. 21 5
145 26.74 atmosphere 995.0 270 > th dose independent rect. 21 5
147 26.74 radiation 1.0 270 < th dose independent rect. 21 5
152 26.74 temperature 10.0 270 > th dose independent rect. 2 19
153 26.74 radiation 1.0 270 < th dose dependent rect. 21 5
187 26.92 atmosphere 995.0 270 > th dose independent rect. 2 19
205 26.95 radiation 1.0 270 < th dose dependent rect. 3 16
209 26.99 atmosphere 995.0 270 > th dose independent rect. 16 15
214 27.04 precipitation 0.1 270 < th dose independent rect. 20 7
215 27.04 radiation 1.0 270 > th dose independent rect. 7 9
218 27.04 precipitation 0.1 270 < th dose dependent rect. 20 7
220 27.05 wind 9.0 270 < th dose independent rect. 20 7
224 27.07 temperature 10.0 270 > th dose independent rect. 20 7
225 27.07 temperature 30.0 270 < th dose independent rect. 20 7
226 27.07 humidity 50.0 270 > th dose independent rect. 20 7
229 27.07 atmosphere 995.0 270 > th dose independent rect. 20 7
230 27.07 radiation 1.0 270 < th dose independent rect. 20 7
235 27.07 wind 9.0 270 < th dose independent rect. 7 9
236 27.07 precipitation 0.1 270 < th dose independent rect. 7 9
237 27.07 temperature 10.0 270 > th dose independent rect. 3 17
238 27.07 atmosphere 1015.0 270 < th dose independent rect. 3 17
239 27.07 radiation 1.0 270 < th dose dependent rect. 20 7
244 27.07 precipitation 0.1 270 < th dose dependent rect. 7 9
245 27.07 radiation 40.0 90 < th dose dependent rect. 4 19
249 27.08 wind 9.0 270 < th dose independent rect. 2 19
255 27.11 humidity 60.0 90 > th dose dependent rect. 4 7
259 27.14 radiation 1.0 10 < th dose dependent rect. 23 6
274 27.18 atmosphere 995.0 270 > th dose independent rect. 3 17
280 27.21 temperature 10.0 270 > th dose independent rect. 7 9
281 27.21 atmosphere 1015.0 270 < th dose independent rect. 7 9
282 27.21 temperature 10.0 270 > th dose independent rect. 16 15
283 27.21 radiation 40.0 270 < th dose independent rect. 16 15
287 27.22 wind 9.0 10 < th dose independent rect. 23 6
288 27.22 temperature 10.0 10 > th dose independent rect. 23 6
289 27.22 temperature 30.0 10 < th dose independent rect. 23 6
290 27.22 humidity 50.0 10 > th dose independent rect. 23 6
293 27.22 atmosphere 995.0 10 > th dose independent rect. 23 6
294 27.22 radiation 1.0 10 < th dose independent rect. 23 6
299 27.22 temperature 10.0 10 > th dose independent rect. 5 18
301 27.22 atmosphere 1015.0 10 < th dose independent rect. 5 18
318 27.27 wind 9.0 270 < th dose independent rect. 16 15
338 27.30 precipitation 0.1 10 < th dose independent rect. 5 18
340 27.30 precipitation 0.1 10 < th dose dependent rect. 5 18
349 27.35 precipitation 0.1 10 < th dose independent rect. 23 6
352 27.35 precipitation 0.1 10 < th dose dependent rect. 23 6
353 27.35 humidity 70.0 90 > th dose dependent rect. 4 18
387 27.41 wind 9.0 270 < th dose independent rect. 3 17
395 27.42 humidity 50.0 10 > th dose dependent rect. 5 4
400 27.44 radiation 1.0 10 < th dose dependent rect. 23 13
404 27.44 humidity 50.0 10 > th dose dependent rect. 5 18
413 27.47 temperature 10.0 10 > th dose dependent rect. 5 4
422 27.51 precipitation 0.1 90 < th dose independent rect. 23 5
423 27.51 precipitation 0.1 90 < th dose dependent rect. 23 5
429 27.53 atmosphere 1015.0 90 < th dose independent rect. 4 19
435 27.55 wind 7.0 90 < th dose independent rect. 23 5
440 27.56 wind 9.0 10 < th dose dependent rect. 5 4
447 27.60 wind 7.0 270 < th dose independent rect. 22 3
449 27.60 temperature 10.0 90 > th dose independent rect. 23 5
450 27.60 temperature 30.0 90 < th dose independent rect. 23 5
451 27.60 humidity 50.0 90 > th dose independent rect. 23 5
454 27.60 atmosphere 995.0 90 > th dose independent rect. 23 5
455 27.60 radiation 1.0 90 < th dose independent rect. 23 5
461 27.60 temperature 10.0 90 > th dose independent rect. 4 19
472 27.61 atmosphere 995.0 10 > th dose independent rect. 5 18
477 27.62 wind 1.0 270 > th dose independent rect. 21 5
478 27.63 precipitation 0.1 270 < th dose independent rect. 22 3
480 27.63 precipitation 0.1 270 < th dose dependent rect. 22 3
494 27.64 wind 9.0 10 < th dose independent rect. 5 18
523 27.67 humidity 90.0 270 < th dose independent rect. 23 15
534 27.68 wind 1.0 270 > th dose independent rect. 8 18
539 27.69 wind 9.0 10 < th dose independent rect. 9 20
542 27.70 temperature 10.0 270 > th dose independent rect. 22 3
543 27.70 temperature 30.0 270 < th dose independent rect. 22 3
544 27.70 humidity 50.0 270 > th dose independent rect. 22 3
547 27.70 atmosphere 995.0 270 > th dose independent rect. 22 3
548 27.70 radiation 1.0 270 < th dose independent rect. 22 3
553 27.70 radiation 40.0 10 < th dose independent rect. 5 4
555 27.70 temperature 10.0 270 > th dose independent rect. 1 21
556 27.70 radiation 1.0 270 < th dose dependent rect. 22 3
601 27.72 humidity 50.0 270 > th dose dependent rect. 17 14
611 27.75 wind 9.0 270 < th dose dependent rect. 21 5
635 27.79 humidity 50.0 270 > th dose independent rect. 17 14
638 27.79 radiation 40.0 90 < th dose independent rect. 4 19
645 27.80 wind 7.0 10 < th dose independent rect. 5 4
647 27.80 temperature 10.0 10 > th dose independent rect. 5 4
649 27.80 temperature 30.0 10 < th dose independent rect. 5 4
650 27.80 humidity 50.0 10 > th dose independent rect. 5 4
652 27.80 atmosphere 995.0 10 > th dose independent rect. 5 4
653 27.80 atmosphere 1015.0 10 < th dose independent rect. 5 4
657 27.80 temperature 10.0 10 > th dose independent rect. 9 20
663 27.82 precipitation 0.1 10 < th dose independent rect. 5 4
665 27.82 precipitation 0.1 10 < th dose dependent rect. 5 4
673 27.84 humidity 80.0 270 > th dose dependent rect. 2 18
678 27.85 atmosphere 995.0 270 > th dose independent rect. 7 9
689 27.86 precipitation 0.1 10 < th dose independent rect. 9 20
691 27.86 precipitation 0.1 10 < th dose dependent rect. 9 20
692 27.87 wind 1.0 270 > th dose independent rect. 23 2
698 27.88 radiation 40.0 10 < th dose dependent rect. 5 4
721 27.90 wind 9.0 90 < th dose independent rect. 4 19
722 27.90 precipitation 0.1 270 < th dose independent rect. 2 19
725 27.90 precipitation 0.1 270 < th dose dependent rect. 2 19
730 27.91 radiation 20.0 90 < th dose independent rect. 4 19
737 27.93 wind 9.0 90 < th dose dependent rect. 21 7
801 28.04 humidity 80.0 90 > th dose independent rect. 4 7
824 28.08 wind 1.0 270 > th dose independent rect. 7 9
841 28.11 radiation 40.0 10 < th dose independent rect. 5 18
853 28.13 atmosphere 1015.0 270 < th dose independent rect. 1 21
886 28.15 wind 9.0 270 < th dose independent rect. 1 21
932 28.18 wind 9.0 270 < th dose dependent rect. 22 3
956 28.21 wind 1.0 90 > th dose independent rect. 23 6
964 28.22 precipitation 0.1 270 < th dose independent rect. 3 17
967 28.22 atmosphere 995.0 270 > th dose independent rect. 1 21
970 28.22 precipitation 0.1 270 < th dose dependent rect. 3 17