Os09g0458100
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Xyloglucan fucosyltransferase family protein.
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Os09g0458100 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Xyloglucan fucosyltransferase family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = atmosphere,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 280.85 | 0.787 | 2.94 | 0.373 | 0.101 | 2.13 | -0.599 | 2.26 | 0.163 | 2.14 | 1016 | 4198 | -- | -- |
| 283.59 | 0.784 | 2.92 | 0.455 | 0.113 | 1.4 | -0.635 | -- | 0.166 | 2.44 | 1016 | 4149 | -- | -- |
| 281.73 | 0.782 | 2.94 | 0.371 | 0.136 | 2.21 | -- | 2.6 | 0.179 | 4.4 | 1016 | 4172 | -- | -- |
| 284.72 | 0.786 | 2.92 | 0.485 | 0.129 | 1.36 | -- | -- | 0.173 | 3.45 | 1016 | 4133 | -- | -- |
| 282.75 | 0.783 | 2.94 | 0.38 | -- | 2.07 | -- | 2.32 | 0.165 | -- | 1016 | 4193 | -- | -- |
| 298.21 | 0.81 | 2.94 | 0.279 | 0.0706 | -- | -0.405 | -- | 0.0792 | 2.01 | -- | -- | -- | -- |
| 298.5 | 0.809 | 2.94 | 0.29 | 0.109 | -- | -- | -- | 0.0804 | 5.05 | -- | -- | -- | -- |
| 285.64 | 0.787 | 2.91 | 0.434 | -- | 0.941 | -- | -- | 0.182 | -- | 1015 | 4415 | -- | -- |
| 290.09 | 0.793 | 2.93 | -- | 0.138 | 1.15 | -- | -- | 0.0996 | 4.55 | 1016 | 4109 | -- | -- |
| 299.13 | 0.808 | 2.94 | 0.294 | -- | -- | -- | -- | 0.0832 | -- | -- | -- | -- | -- |
| 300.72 | 0.811 | 2.94 | -- | 0.115 | -- | -- | -- | 0.0481 | 4.96 | -- | -- | -- | -- |
| 289.61 | 0.793 | 2.93 | -- | -- | 0.773 | -- | -- | 0.135 | -- | 1014 | 4410 | -- | -- |
| 301.41 | 0.81 | 2.95 | -- | -- | -- | -- | -- | 0.0506 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 273.06 | wind | 5 | 90 | > th | dose dependent | rect. | 1 | 8 |
| 2 | 274.38 | wind | 7 | 90 | > th | dose independent | rect. | 1 | 8 |
| 10 | 274.60 | wind | 7 | 90 | > th | dose independent | rect. | 7 | 2 |
| 13 | 274.60 | wind | 7 | 90 | > th | dose dependent | rect. | 7 | 2 |
| 25 | 278.31 | radiation | 20 | 270 | > th | dose independent | rect. | 6 | 1 |
| 39 | 278.54 | radiation | 20 | 270 | > th | dose dependent | rect. | 6 | 1 |
| 58 | 279.45 | wind | 5 | 90 | > th | dose independent | rect. | 24 | 10 |
| 59 | 279.82 | temperature | 15 | 1440 | > th | dose independent | rect. | 13 | 1 |
| 63 | 280.89 | wind | 5 | 90 | > th | dose dependent | rect. | 24 | 10 |
| 64 | 280.90 | atmosphere | 1015 | 4320 | > th | dose dependent | rect. | 7 | 13 |
| 70 | 281.12 | atmosphere | 1015 | 4320 | > th | dose dependent | rect. | 9 | 9 |
| 83 | 281.38 | atmosphere | 1015 | 4320 | > th | dose dependent | sin | 23 | NA |
| 91 | 281.56 | atmosphere | 1015 | 4320 | > th | dose independent | rect. | 9 | 11 |
| 95 | 281.60 | atmosphere | 1015 | 4320 | < th | dose independent | rect. | 9 | 11 |
| 97 | 281.63 | atmosphere | 1015 | 4320 | > th | dose independent | rect. | 7 | 13 |
| 100 | 281.65 | temperature | 15 | 10 | > th | dose independent | rect. | 13 | 23 |
| 105 | 281.73 | atmosphere | 1015 | 4320 | > th | dose dependent | rect. | 11 | 1 |
| 110 | 281.75 | wind | 5 | 90 | > th | dose dependent | rect. | 21 | 13 |
| 135 | 281.85 | atmosphere | 1015 | 4320 | < th | dose independent | rect. | 11 | 6 |
| 167 | 282.05 | atmosphere | 1015 | 4320 | > th | dose dependent | rect. | 10 | 3 |
| 199 | 282.33 | temperature | 10 | 10 | > th | dose dependent | rect. | 13 | 23 |
| 203 | 282.35 | atmosphere | 1015 | 4320 | < th | dose independent | rect. | 14 | 2 |
| 232 | 282.52 | atmosphere | 1015 | 4320 | > th | dose independent | rect. | 14 | 1 |
| 239 | 282.56 | temperature | 20 | 1440 | < th | dose independent | rect. | 4 | 2 |
| 247 | 282.61 | atmosphere | 1015 | 4320 | > th | dose independent | sin | 23 | NA |
| 271 | 282.74 | atmosphere | 1015 | 4320 | > th | dose dependent | rect. | 13 | 3 |
| 272 | 282.75 | atmosphere | 1015 | 4320 | < th | dose independent | sin | 23 | NA |
| 282 | 282.77 | temperature | 20 | 1440 | > th | dose independent | rect. | 4 | 2 |
| 320 | 282.89 | temperature | 10 | 720 | > th | dose dependent | rect. | 13 | 17 |
| 419 | 283.35 | atmosphere | 1015 | 4320 | > th | dose dependent | no | NA | NA |
| 427 | 283.40 | atmosphere | 1015 | 4320 | > th | dose dependent | rect. | 9 | 23 |
| 439 | 283.44 | temperature | 25 | 720 | < th | dose dependent | rect. | 11 | 18 |
| 440 | 283.44 | temperature | 25 | 720 | < th | dose dependent | rect. | 9 | 20 |
| 448 | 283.46 | atmosphere | 1015 | 4320 | > th | dose dependent | rect. | 19 | 23 |
| 455 | 283.47 | atmosphere | 1015 | 4320 | > th | dose dependent | rect. | 17 | 23 |
| 459 | 283.49 | atmosphere | 1015 | 4320 | > th | dose dependent | rect. | 13 | 23 |
| 495 | 283.62 | radiation | 1 | 1440 | < th | dose independent | rect. | 8 | 20 |
| 503 | 283.63 | radiation | 1 | 1440 | < th | dose independent | rect. | 8 | 17 |
| 514 | 283.65 | temperature | 10 | 720 | > th | dose dependent | rect. | 13 | 22 |
| 527 | 283.69 | radiation | 1 | 1440 | < th | dose independent | rect. | 8 | 11 |
| 589 | 283.84 | wind | 9 | 43200 | < th | dose independent | rect. | 17 | 5 |
| 605 | 283.87 | radiation | 1 | 720 | < th | dose dependent | rect. | 8 | 19 |
| 647 | 284.01 | wind | 5 | 90 | > th | dose independent | rect. | 21 | 13 |
| 658 | 284.03 | temperature | 25 | 720 | < th | dose dependent | rect. | 5 | 21 |
| 661 | 284.06 | wind | 9 | 43200 | > th | dose independent | rect. | 17 | 5 |
| 675 | 284.09 | radiation | 1 | 1440 | > th | dose independent | rect. | 10 | 3 |
| 681 | 284.11 | radiation | 1 | 43200 | < th | dose dependent | rect. | 22 | 3 |
| 699 | 284.15 | wind | 9 | 43200 | > th | dose dependent | rect. | 17 | 5 |
| 706 | 284.16 | radiation | 1 | 1440 | > th | dose independent | rect. | 8 | 11 |
| 722 | 284.17 | radiation | 1 | 720 | < th | dose dependent | rect. | 14 | 13 |
| 755 | 284.22 | radiation | 1 | 720 | < th | dose dependent | rect. | 12 | 15 |
| 775 | 284.27 | temperature | 25 | 720 | < th | dose dependent | rect. | 1 | 23 |
| 777 | 284.28 | radiation | 1 | 43200 | < th | dose dependent | rect. | 22 | 6 |
| 785 | 284.29 | temperature | 10 | 720 | > th | dose dependent | rect. | 13 | 12 |
| 822 | 284.37 | radiation | 1 | 1440 | < th | dose dependent | rect. | 7 | 8 |
| 829 | 284.38 | temperature | 10 | 1440 | > th | dose dependent | rect. | 4 | 2 |
| 853 | 284.44 | temperature | 25 | 1440 | < th | dose dependent | rect. | 4 | 2 |
| 856 | 284.45 | radiation | 1 | 720 | < th | dose independent | rect. | 12 | 15 |
| 858 | 284.45 | temperature | 15 | 270 | > th | dose independent | rect. | 10 | 23 |
| 862 | 284.45 | radiation | 1 | 1440 | < th | dose dependent | rect. | 8 | 10 |
| 886 | 284.49 | wind | 5 | 30 | < th | dose independent | rect. | 12 | 1 |
| 917 | 284.54 | radiation | 1 | 720 | < th | dose independent | rect. | 14 | 13 |
| 918 | 284.54 | temperature | 15 | 720 | > th | dose independent | rect. | 9 | 16 |
| 937 | 284.57 | temperature | 25 | 720 | < th | dose dependent | no | NA | NA |
| 951 | 284.59 | temperature | 25 | 720 | < th | dose dependent | sin | 16 | NA |
| 963 | 284.61 | radiation | 1 | 1440 | > th | dose independent | rect. | 7 | 7 |
| 969 | 284.61 | temperature | 10 | 720 | > th | dose dependent | rect. | 10 | 22 |
| 974 | 284.63 | temperature | 30 | 10 | > th | dose independent | rect. | 12 | 1 |
| 977 | 284.63 | radiation | 1 | 1440 | < th | dose independent | rect. | 7 | 7 |
| 986 | 284.65 | temperature | 15 | 720 | > th | dose independent | rect. | 11 | 16 |
| 992 | 284.65 | temperature | 10 | 720 | > th | dose dependent | rect. | 3 | 22 |