Os09g0457100
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Cytochrome P450 family protein.
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Os09g0457100 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Cytochrome P450 family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = sin)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 233.28 | 0.718 | 10.3 | -0.584 | 4.89 | 3.19 | 0.0702 | -1.91 | -0.36 | 10.6 | 26.58 | 236 | 8.3 | -- |
| 235.34 | 0.714 | 10.4 | -0.766 | 4.76 | 3.29 | 0.825 | -- | -0.438 | 10.4 | 25.03 | 243 | 8.92 | -- |
| 233.29 | 0.711 | 10.3 | -0.58 | 4.89 | 3.18 | -- | -1.95 | -0.36 | 10.5 | 26.59 | 235 | 8.32 | -- |
| 238 | 0.719 | 10.4 | -0.723 | 4.74 | 3.43 | -- | -- | -0.447 | 10.3 | 24.61 | 244 | 9.09 | -- |
| 356.09 | 0.879 | 10.5 | -0.843 | -- | 5.21 | -- | 0.143 | -0.586 | -- | 60 | 664 | 1.48 | -- |
| 317.48 | 0.835 | 10.5 | -1.22 | 4.2 | -- | 1.56 | -- | -0.813 | 10 | -- | -- | -- | -- |
| 326.99 | 0.847 | 10.5 | -1.16 | 4.19 | -- | -- | -- | -0.81 | 10 | -- | -- | -- | -- |
| 322.55 | 0.836 | 10.5 | -1.01 | -- | 4.7 | -- | -- | -0.678 | -- | 215 | 1122 | 5.39 | -- |
| 250.22 | 0.737 | 10.4 | -- | 4.73 | 4.01 | -- | -- | -0.389 | 10.3 | 23.44 | 234 | 9.29 | -- |
| 1387.56 | 1.74 | 10.6 | -1.21 | -- | -- | -- | -- | -0.814 | -- | -- | -- | -- | -- |
| 362.56 | 0.891 | 10.4 | -- | 4.2 | -- | -- | -- | -0.681 | 10.1 | -- | -- | -- | -- |
| 344.59 | 0.865 | 10.5 | -- | -- | 5.06 | -- | -- | -0.522 | -- | 152.4 | 1160 | 5.75 | -- |
| 1426.46 | 1.76 | 10.5 | -- | -- | -- | -- | -- | -0.679 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 225.26 | temperature | 20 | 270 | > th | dose independent | rect. | 15 | 13 |
| 3 | 226.60 | temperature | 30 | 270 | < th | dose dependent | rect. | 19 | 8 |
| 48 | 234.07 | temperature | 20 | 10 | < th | dose independent | rect. | 20 | 8 |
| 51 | 234.43 | temperature | 25 | 270 | < th | dose dependent | sin | 15 | NA |
| 54 | 234.49 | temperature | 25 | 10 | < th | dose dependent | rect. | 20 | 8 |
| 57 | 234.87 | temperature | 25 | 90 | < th | dose dependent | sin | 13 | NA |
| 62 | 235.21 | temperature | 20 | 10 | < th | dose independent | rect. | 18 | 10 |
| 63 | 235.25 | temperature | 20 | 10 | < th | dose independent | sin | 12 | NA |
| 68 | 235.41 | temperature | 20 | 270 | < th | dose independent | rect. | 16 | 10 |
| 71 | 235.45 | temperature | 25 | 10 | < th | dose dependent | rect. | 18 | 10 |
| 87 | 235.77 | temperature | 20 | 90 | > th | dose independent | sin | 13 | NA |
| 107 | 236.29 | temperature | 15 | 270 | > th | dose dependent | rect. | 16 | 12 |
| 251 | 240.77 | temperature | 20 | 10 | > th | dose independent | rect. | 18 | 12 |
| 254 | 240.81 | temperature | 20 | 270 | < th | dose independent | rect. | 21 | 4 |
| 295 | 241.49 | temperature | 20 | 90 | > th | dose dependent | rect. | 18 | 11 |
| 330 | 242.66 | temperature | 25 | 270 | < th | dose dependent | rect. | 23 | 1 |
| 490 | 245.78 | temperature | 20 | 270 | < th | dose independent | rect. | 23 | 1 |
| 575 | 247.38 | radiation | 1 | 90 | < th | dose independent | sin | 23 | NA |
| 596 | 247.73 | radiation | 1 | 90 | > th | dose independent | sin | 23 | NA |
| 628 | 248.29 | temperature | 20 | 10 | > th | dose independent | rect. | 18 | 16 |
| 659 | 248.82 | radiation | 10 | 90 | < th | dose dependent | rect. | 7 | 14 |
| 701 | 249.43 | radiation | 10 | 30 | < th | dose dependent | rect. | 7 | 16 |
| 715 | 249.64 | temperature | 20 | 10 | > th | dose independent | rect. | 16 | 20 |
| 768 | 250.34 | radiation | 1 | 30 | < th | dose independent | rect. | 5 | 18 |
| 872 | 251.82 | temperature | 25 | 10 | < th | dose dependent | rect. | 12 | 16 |
| 876 | 251.87 | radiation | 10 | 90 | < th | dose dependent | sin | 22 | NA |
| 885 | 251.98 | temperature | 20 | 270 | > th | dose independent | rect. | 15 | 6 |
| 917 | 252.52 | radiation | 10 | 90 | < th | dose dependent | rect. | 24 | 23 |
| 976 | 253.29 | radiation | 1 | 90 | < th | dose independent | rect. | 5 | 16 |