Os09g0456800
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Heat stress transcription factor Spl7 (Heat shock transcription factor) (Heat shock factor RHSF10).
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Os09g0456800 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Heat stress transcription factor Spl7 (Heat shock transcription factor) (Heat shock factor RHSF10).
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = radiation,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 134.56 | 0.545 | 11.4 | 2.13 | 0.376 | -1.09 | 0.615 | 0.384 | 0.465 | 18.5 | 10 | 270 | -- | -- |
| 135.05 | 0.541 | 11.4 | 2.13 | 0.374 | -1.08 | 0.608 | -- | 0.462 | 18.1 | 10 | 268 | -- | -- |
| 135.48 | 0.542 | 11.4 | 2.12 | 0.376 | -1.09 | -- | 0.465 | 0.464 | 18.6 | 10 | 269 | -- | -- |
| 136.26 | 0.544 | 11.4 | 2.12 | 0.366 | -1.08 | -- | -- | 0.46 | 18.4 | 10 | 263 | -- | -- |
| 139.82 | 0.551 | 11.4 | 2.07 | -- | -0.972 | -- | 0.54 | 0.424 | -- | 10.75 | 218 | -- | -- |
| 156.07 | 0.586 | 11.4 | 1.94 | 0.893 | -- | -0.0797 | -- | 0.353 | 0.842 | -- | -- | -- | -- |
| 156.1 | 0.585 | 11.4 | 1.94 | 0.893 | -- | -- | -- | 0.353 | 0.829 | -- | -- | -- | -- |
| 140.14 | 0.551 | 11.4 | 2.1 | -- | -0.924 | -- | -- | 0.409 | -- | 10.07 | 199 | -- | -- |
| 234.81 | 0.714 | 11.5 | -- | 0.319 | -1.08 | -- | -- | 0.156 | 17.9 | 8.29 | 258 | -- | -- |
| 205.9 | 0.67 | 11.4 | 1.97 | -- | -- | -- | -- | 0.37 | -- | -- | -- | -- | -- |
| 255.09 | 0.747 | 11.5 | -- | 0.924 | -- | -- | -- | 0.138 | 0.923 | -- | -- | -- | -- |
| 238.05 | 0.719 | 11.5 | -- | -- | -0.916 | -- | -- | 0.16 | -- | 8.43 | 206 | -- | -- |
| 308.35 | 0.82 | 11.5 | -- | -- | -- | -- | -- | 0.151 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 126.47 | temperature | 25 | 4320 | < th | dose independent | rect. | 3 | 3 |
| 2 | 126.87 | temperature | 25 | 4320 | < th | dose independent | rect. | 5 | 1 |
| 3 | 127.05 | temperature | 25 | 4320 | > th | dose independent | rect. | 1 | 5 |
| 8 | 127.76 | temperature | 25 | 4320 | > th | dose independent | rect. | 5 | 1 |
| 11 | 128.03 | temperature | 25 | 4320 | < th | dose independent | rect. | 1 | 6 |
| 17 | 128.41 | temperature | 25 | 4320 | > th | dose independent | rect. | 1 | 1 |
| 44 | 129.88 | temperature | 25 | 4320 | > th | dose dependent | rect. | 5 | 1 |
| 69 | 130.96 | radiation | 30 | 270 | < th | dose dependent | rect. | 12 | 21 |
| 72 | 131.05 | temperature | 25 | 4320 | < th | dose independent | rect. | 1 | 1 |
| 78 | 131.29 | humidity | 70 | 270 | > th | dose independent | rect. | 13 | 18 |
| 80 | 131.35 | radiation | 10 | 270 | > th | dose independent | rect. | 15 | 23 |
| 109 | 131.98 | temperature | 25 | 4320 | > th | dose independent | sin | 8 | NA |
| 116 | 132.12 | humidity | 50 | 270 | > th | dose dependent | rect. | 13 | 19 |
| 124 | 132.22 | temperature | 25 | 4320 | < th | dose independent | sin | 8 | NA |
| 125 | 132.23 | temperature | 30 | 270 | < th | dose dependent | rect. | 13 | 6 |
| 126 | 132.24 | temperature | 25 | 4320 | > th | dose dependent | rect. | 23 | 2 |
| 128 | 132.28 | radiation | 20 | 270 | < th | dose dependent | rect. | 4 | 14 |
| 133 | 132.34 | atmosphere | 1000 | 270 | > th | dose independent | rect. | 12 | 22 |
| 135 | 132.35 | radiation | 20 | 270 | < th | dose independent | rect. | 11 | 21 |
| 142 | 132.44 | atmosphere | 1000 | 270 | > th | dose independent | rect. | 13 | 20 |
| 145 | 132.50 | radiation | 20 | 270 | < th | dose dependent | rect. | 12 | 6 |
| 149 | 132.54 | temperature | 25 | 4320 | > th | dose dependent | rect. | 23 | 8 |
| 165 | 132.70 | radiation | 10 | 270 | < th | dose dependent | rect. | 9 | 9 |
| 169 | 132.75 | atmosphere | 1000 | 270 | > th | dose independent | rect. | 14 | 18 |
| 221 | 133.16 | wind | 1 | 14400 | < th | dose independent | rect. | 2 | 1 |
| 234 | 133.25 | wind | 1 | 14400 | > th | dose independent | rect. | 2 | 1 |
| 261 | 133.47 | humidity | 60 | 270 | > th | dose dependent | rect. | 13 | 7 |
| 282 | 133.58 | atmosphere | 1000 | 270 | < th | dose independent | rect. | 7 | 20 |
| 286 | 133.61 | radiation | 20 | 270 | < th | dose independent | rect. | 13 | 4 |
| 334 | 133.86 | radiation | 10 | 270 | > th | dose independent | rect. | 8 | 23 |
| 345 | 133.91 | radiation | 10 | 270 | > th | dose independent | sin | 1 | NA |
| 358 | 133.99 | atmosphere | 1000 | 30 | > th | dose independent | rect. | 15 | 17 |
| 362 | 134.00 | temperature | 25 | 4320 | > th | dose dependent | rect. | 3 | 4 |
| 392 | 134.13 | temperature | 30 | 1440 | > th | dose independent | rect. | 10 | 1 |
| 411 | 134.21 | atmosphere | 1000 | 270 | < th | dose independent | rect. | 16 | 22 |
| 435 | 134.33 | radiation | 20 | 270 | < th | dose dependent | rect. | 20 | 23 |
| 479 | 134.52 | atmosphere | 1000 | 10 | > th | dose independent | rect. | 15 | 19 |
| 489 | 134.57 | radiation | 10 | 270 | > th | dose independent | no | NA | NA |
| 492 | 134.57 | radiation | 10 | 270 | > th | dose independent | rect. | 6 | 12 |
| 572 | 134.58 | radiation | 10 | 270 | < th | dose independent | rect. | 12 | 6 |
| 663 | 134.88 | atmosphere | 1000 | 270 | > th | dose independent | sin | 14 | NA |
| 689 | 134.94 | temperature | 25 | 270 | > th | dose dependent | rect. | 17 | 21 |
| 690 | 134.95 | radiation | 10 | 720 | > th | dose independent | rect. | 8 | 6 |
| 693 | 134.95 | wind | 1 | 14400 | < th | dose dependent | rect. | 2 | 1 |
| 694 | 134.96 | wind | 1 | 14400 | < th | dose independent | rect. | 10 | 1 |
| 718 | 135.05 | temperature | 30 | 1440 | < th | dose independent | rect. | 9 | 2 |
| 719 | 135.05 | humidity | 70 | 270 | > th | dose independent | rect. | 13 | 6 |
| 736 | 135.11 | humidity | 80 | 270 | > th | dose independent | rect. | 2 | 18 |
| 801 | 135.25 | atmosphere | 1000 | 270 | < th | dose independent | sin | 16 | NA |
| 813 | 135.30 | radiation | 1 | 270 | < th | dose independent | rect. | 9 | 9 |
| 862 | 135.42 | temperature | 25 | 4320 | > th | dose independent | rect. | 23 | 22 |
| 865 | 135.43 | radiation | 1 | 270 | < th | dose independent | rect. | 5 | 13 |
| 867 | 135.44 | temperature | 25 | 4320 | < th | dose independent | rect. | 23 | 22 |
| 878 | 135.47 | humidity | 70 | 90 | > th | dose independent | rect. | 13 | 22 |
| 904 | 135.54 | temperature | 25 | 30 | < th | dose independent | sin | 20 | NA |
| 908 | 135.54 | temperature | 30 | 1440 | > th | dose dependent | rect. | 13 | 1 |
| 911 | 135.55 | atmosphere | 1000 | 270 | > th | dose independent | no | NA | NA |
| 929 | 135.59 | humidity | 80 | 270 | > th | dose independent | rect. | 1 | 20 |
| 936 | 135.60 | temperature | 30 | 90 | < th | dose dependent | rect. | 5 | 16 |
| 942 | 135.61 | humidity | 70 | 90 | > th | dose dependent | rect. | 5 | 16 |
| 947 | 135.63 | atmosphere | 1000 | 1440 | < th | dose independent | rect. | 17 | 1 |
| 967 | 135.67 | temperature | 25 | 4320 | > th | dose dependent | sin | 9 | NA |
| 994 | 135.71 | atmosphere | 1000 | 270 | < th | dose independent | no | NA | NA |
| 997 | 135.71 | atmosphere | 1000 | 270 | > th | dose independent | rect. | 24 | 23 |