Os09g0454900
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Curculin-like (mannose-binding) lectin domain containing protein.
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Os09g0454900 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Curculin-like (mannose-binding) lectin domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = radiation,
response mode = < th, dose dependency = dose independent, type of G = sin)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 286.91 | 0.796 | 6 | 2.44 | 1.7 | 6.9 | 3.9 | 4.3 | 0.964 | 15 | 0.8325 | 756 | 16.2 | -- |
| 291.62 | 0.795 | 5.97 | 2.59 | 1.75 | 6.83 | 2.11 | -- | 1.02 | 14.9 | 1.15 | 759 | 16.1 | -- |
| 310.28 | 0.82 | 5.89 | 2.74 | 0.996 | 6.01 | -- | -0.309 | 1.03 | 14.7 | 0.9489 | 759 | 16.7 | -- |
| 301.46 | 0.809 | 5.98 | 2.6 | 1.93 | 6.48 | -- | -- | 1.02 | 15 | 1.16 | 765 | 15.6 | -- |
| 324.79 | 0.839 | 5.85 | 2.94 | -- | 4.92 | -- | -1.64 | 1.19 | -- | 1.145 | 808 | 17.1 | -- |
| 446.84 | 0.991 | 6.04 | 1.93 | 1.24 | -- | -1.8 | -- | 0.704 | 1.33 | -- | -- | -- | -- |
| 460.13 | 1 | 6.03 | 2 | 1.24 | -- | -- | -- | 0.715 | 1.3 | -- | -- | -- | -- |
| 322.29 | 0.836 | 5.94 | 2.54 | -- | 4.72 | -- | -- | 1.05 | -- | 1.52 | 767 | 17.1 | -- |
| 455.83 | 0.994 | 6.04 | -- | 1.41 | 5.14 | -- | -- | 0.743 | 14.7 | 1.81 | 761 | 15.2 | -- |
| 555.52 | 1.1 | 6.02 | 2.05 | -- | -- | -- | -- | 0.74 | -- | -- | -- | -- | -- |
| 565.25 | 1.11 | 6.08 | -- | 1.28 | -- | -- | -- | 0.492 | 1.36 | -- | -- | -- | -- |
| 473.17 | 1.01 | 6.03 | -- | -- | 3.9 | -- | -- | 0.669 | -- | 1.62 | 758 | 16.9 | -- |
| 665.9 | 1.2 | 6.07 | -- | -- | -- | -- | -- | 0.513 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 293.64 | radiation | 1 | 1440 | < th | dose independent | rect. | 9 | 21 |
| 4 | 293.99 | radiation | 1 | 1440 | > th | dose independent | rect. | 9 | 21 |
| 9 | 294.53 | radiation | 1 | 720 | < th | dose independent | sin | 22 | NA |
| 11 | 294.80 | radiation | 1 | 720 | < th | dose dependent | rect. | 5 | 14 |
| 15 | 297.10 | radiation | 1 | 720 | < th | dose independent | rect. | 5 | 14 |
| 18 | 298.57 | radiation | 1 | 720 | < th | dose dependent | sin | 22 | NA |
| 25 | 302.00 | radiation | 1 | 1440 | > th | dose independent | rect. | 9 | 10 |
| 68 | 302.46 | radiation | 1 | 1440 | < th | dose independent | rect. | 9 | 16 |
| 69 | 302.47 | radiation | 1 | 1440 | < th | dose independent | rect. | 9 | 14 |
| 74 | 302.50 | radiation | 1 | 1440 | < th | dose dependent | rect. | 8 | 22 |
| 75 | 302.51 | radiation | 1 | 1440 | < th | dose independent | rect. | 9 | 12 |
| 80 | 302.57 | radiation | 1 | 1440 | > th | dose independent | sin | 21 | NA |
| 173 | 304.65 | radiation | 1 | 720 | < th | dose independent | sin | 15 | NA |
| 185 | 304.90 | radiation | 1 | 1440 | < th | dose dependent | rect. | 8 | 17 |
| 191 | 304.96 | radiation | 1 | 1440 | < th | dose dependent | rect. | 8 | 15 |
| 193 | 305.00 | radiation | 1 | 1440 | < th | dose dependent | rect. | 8 | 13 |
| 203 | 305.12 | radiation | 1 | 720 | < th | dose independent | rect. | 5 | 22 |
| 204 | 305.12 | radiation | 1 | 1440 | < th | dose dependent | rect. | 8 | 11 |
| 272 | 308.47 | radiation | 1 | 720 | < th | dose dependent | rect. | 5 | 22 |
| 385 | 312.19 | radiation | 1 | 1440 | < th | dose independent | rect. | 5 | 18 |
| 413 | 312.99 | radiation | 1 | 1440 | < th | dose independent | rect. | 20 | 23 |
| 428 | 313.05 | radiation | 1 | 1440 | < th | dose independent | rect. | 22 | 23 |
| 429 | 313.06 | radiation | 1 | 1440 | < th | dose independent | no | NA | NA |
| 436 | 313.08 | radiation | 1 | 1440 | < th | dose dependent | rect. | 5 | 18 |
| 444 | 313.12 | radiation | 1 | 1440 | > th | dose independent | rect. | 5 | 14 |
| 461 | 313.15 | radiation | 1 | 1440 | < th | dose independent | rect. | 11 | 23 |
| 502 | 313.77 | radiation | 1 | 1440 | > th | dose independent | no | NA | NA |
| 552 | 313.93 | radiation | 1 | 1440 | > th | dose independent | rect. | 11 | 23 |
| 554 | 313.97 | humidity | 70 | 14400 | > th | dose independent | rect. | 19 | 5 |
| 570 | 314.22 | humidity | 70 | 14400 | > th | dose independent | rect. | 19 | 11 |
| 597 | 314.69 | radiation | 1 | 1440 | < th | dose dependent | rect. | 20 | 23 |
| 612 | 314.75 | radiation | 1 | 1440 | < th | dose dependent | rect. | 22 | 23 |
| 618 | 314.77 | radiation | 1 | 1440 | < th | dose dependent | no | NA | NA |
| 657 | 315.03 | radiation | 1 | 1440 | < th | dose dependent | rect. | 11 | 23 |
| 694 | 316.29 | humidity | 80 | 1440 | < th | dose independent | rect. | 6 | 9 |
| 697 | 316.31 | radiation | 1 | 1440 | < th | dose dependent | rect. | 18 | 23 |
| 811 | 317.71 | radiation | 1 | 1440 | < th | dose independent | rect. | 15 | 23 |
| 859 | 318.44 | radiation | 1 | 1440 | > th | dose independent | rect. | 15 | 23 |
| 875 | 318.61 | radiation | 1 | 1440 | < th | dose dependent | rect. | 15 | 23 |
| 903 | 319.15 | humidity | 70 | 14400 | < th | dose independent | rect. | 19 | 12 |
| 908 | 319.32 | humidity | 80 | 1440 | < th | dose independent | sin | 3 | NA |
| 932 | 319.78 | humidity | 70 | 14400 | < th | dose independent | rect. | 19 | 3 |
| 954 | 319.89 | temperature | 25 | 1440 | > th | dose dependent | rect. | 15 | 1 |