Os09g0454200
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os09g0454200 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 16.1 | 0.189 | 10.3 | 0.262 | 0.639 | -0.101 | -0.00215 | 1.02 | -0.0325 | 6.31 | 20.2 | 2611 | -- | -- |
| 17.68 | 0.196 | 10.4 | 0.157 | 0.62 | -0.33 | -0.0405 | -- | -0.077 | 6.44 | 15.73 | 22765 | -- | -- |
| 16.09 | 0.187 | 10.3 | 0.278 | 0.64 | -0.101 | -- | 1.05 | -0.0264 | 6.31 | 20.5 | 2630 | -- | -- |
| 17.63 | 0.196 | 10.4 | 0.199 | 0.623 | -0.346 | -- | -- | -0.0665 | 6.39 | 15.66 | 22834 | -- | -- |
| 37.17 | 0.284 | 10.3 | 0.26 | -- | -0.113 | -- | 0.97 | -0.0256 | -- | 20.6 | 2431 | -- | -- |
| 19.42 | 0.207 | 10.4 | -0.0632 | 0.631 | -- | 0.0699 | -- | -0.141 | 6.37 | -- | -- | -- | -- |
| 19.43 | 0.206 | 10.4 | -0.0622 | 0.632 | -- | -- | -- | -0.142 | 6.39 | -- | -- | -- | -- |
| 38.37 | 0.289 | 10.4 | 0.215 | -- | -0.351 | -- | -- | -0.0739 | -- | 15.59 | 22328 | -- | -- |
| 18.11 | 0.198 | 10.4 | -- | 0.638 | -0.236 | -- | -- | -0.107 | 6.34 | 14.84 | 22758 | -- | -- |
| 40.16 | 0.296 | 10.4 | -0.0458 | -- | -- | -- | -- | -0.128 | -- | -- | -- | -- | -- |
| 19.53 | 0.207 | 10.4 | -- | 0.631 | -- | -- | -- | -0.135 | 6.39 | -- | -- | -- | -- |
| 38.87 | 0.29 | 10.4 | -- | -- | -0.216 | -- | -- | -0.1 | -- | 14.54 | 17420 | -- | -- |
| 40.21 | 0.296 | 10.4 | -- | -- | -- | -- | -- | -0.123 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 15.78 | humidity | 50 | 270 | > th | dose independent | rect. | 13 | 14 |
| 5 | 16.23 | temperature | 20 | 1440 | > th | dose independent | rect. | 19 | 10 |
| 6 | 16.24 | temperature | 20 | 1440 | < th | dose independent | rect. | 19 | 10 |
| 35 | 16.33 | temperature | 20 | 1440 | > th | dose independent | sin | 12 | NA |
| 43 | 16.34 | temperature | 20 | 1440 | < th | dose independent | sin | 12 | NA |
| 92 | 16.40 | temperature | 20 | 1440 | < th | dose independent | rect. | 21 | 5 |
| 157 | 16.46 | temperature | 20 | 1440 | > th | dose independent | rect. | 1 | 1 |
| 158 | 16.46 | temperature | 20 | 1440 | > th | dose independent | rect. | 23 | 3 |
| 170 | 16.47 | temperature | 20 | 1440 | < th | dose independent | rect. | 1 | 1 |
| 172 | 16.47 | temperature | 20 | 1440 | < th | dose independent | rect. | 23 | 3 |
| 223 | 16.49 | temperature | 25 | 1440 | < th | dose dependent | rect. | 20 | 5 |
| 225 | 16.50 | temperature | 20 | 4320 | < th | dose independent | rect. | 21 | 2 |
| 287 | 16.53 | temperature | 15 | 1440 | > th | dose dependent | rect. | 19 | 7 |
| 347 | 16.56 | temperature | 25 | 1440 | < th | dose dependent | rect. | 23 | 1 |
| 422 | 16.59 | temperature | 20 | 1440 | > th | dose independent | rect. | 3 | 1 |
| 425 | 16.59 | wind | 7 | 270 | < th | dose independent | rect. | 3 | 9 |
| 443 | 16.59 | temperature | 15 | 1440 | > th | dose dependent | rect. | 20 | 1 |
| 474 | 16.60 | temperature | 15 | 270 | > th | dose independent | rect. | 3 | 9 |
| 504 | 16.61 | temperature | 20 | 1440 | < th | dose independent | rect. | 3 | 1 |
| 527 | 16.61 | temperature | 15 | 1440 | > th | dose dependent | rect. | 23 | 1 |
| 543 | 16.61 | temperature | 15 | 90 | > th | dose dependent | rect. | 13 | 15 |
| 544 | 16.61 | temperature | 10 | 270 | > th | dose dependent | rect. | 11 | 17 |
| 726 | 16.67 | wind | 9 | 270 | < th | dose independent | rect. | 12 | 15 |
| 804 | 16.69 | temperature | 30 | 270 | < th | dose independent | rect. | 4 | 8 |
| 898 | 16.71 | temperature | 25 | 1440 | < th | dose dependent | sin | 13 | NA |
| 912 | 16.72 | temperature | 20 | 1440 | > th | dose independent | no | NA | NA |
| 997 | 16.74 | temperature | 20 | 1440 | < th | dose independent | no | NA | NA |
| 999 | 16.74 | temperature | 25 | 270 | < th | dose independent | rect. | 23 | 4 |