Os09g0453200
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : emp24/gp25L/p24 family protein.
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Os09g0453200 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : emp24/gp25L/p24 family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = precipitation,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 31.61 | 0.262 | 3.24 | 0.104 | 0.165 | 3.96 | -0.139 | 0.39 | -0.0539 | 7.16 | 0.8365 | 10 | -- | -- |
| 31.61 | 0.264 | 3.24 | 0.103 | 0.165 | 4.07 | -0.139 | -- | -0.0539 | 7.16 | 0.831 | 9 | -- | -- |
| 31.66 | 0.262 | 3.24 | 0.102 | 0.165 | 3.88 | -- | 0.617 | -0.0535 | 7.34 | 0.8316 | 9 | -- | -- |
| 31.66 | 0.264 | 3.24 | 0.1 | 0.165 | 4.06 | -- | -- | -0.0535 | 7.34 | 0.8316 | 9 | -- | -- |
| 33.1 | 0.268 | 3.24 | 0.104 | -- | 3.87 | -- | 0.831 | -0.0507 | -- | 0.8117 | 9 | -- | -- |
| 47.97 | 0.325 | 3.24 | 0.139 | 0.191 | -- | -0.00355 | -- | -0.0613 | 6.8 | -- | -- | -- | -- |
| 47.97 | 0.324 | 3.24 | 0.139 | 0.191 | -- | -- | -- | -0.0613 | 6.8 | -- | -- | -- | -- |
| 33.1 | 0.269 | 3.24 | 0.103 | -- | 4.11 | -- | -- | -0.0507 | -- | 0.8143 | 10 | -- | -- |
| 31.92 | 0.265 | 3.24 | -- | 0.165 | 4.08 | -- | -- | -0.0646 | 7.31 | 0.8316 | 9 | -- | -- |
| 49.88 | 0.33 | 3.25 | 0.144 | -- | -- | -- | -- | -0.0576 | -- | -- | -- | -- | -- |
| 48.48 | 0.326 | 3.25 | -- | 0.192 | -- | -- | -- | -0.0769 | 6.76 | -- | -- | -- | -- |
| 33.37 | 0.27 | 3.25 | -- | -- | 4.13 | -- | -- | -0.062 | -- | 0.8143 | 10 | -- | -- |
| 50.42 | 0.331 | 3.25 | -- | -- | -- | -- | -- | -0.0736 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 29.91 | wind | 3.0 | 10 | > th | dose independent | rect. | 4 | 1 |
| 3 | 29.91 | wind | 3.0 | 10 | > th | dose dependent | rect. | 4 | 1 |
| 5 | 30.37 | precipitation | 0.1 | 30 | > th | dose dependent | rect. | 3 | 1 |
| 10 | 30.41 | precipitation | 0.1 | 30 | > th | dose independent | rect. | 3 | 1 |
| 31 | 30.83 | precipitation | 0.1 | 30 | > th | dose dependent | rect. | 22 | 7 |
| 134 | 31.28 | precipitation | 0.1 | 30 | > th | dose dependent | sin | 5 | NA |
| 235 | 31.64 | precipitation | 0.1 | 30 | > th | dose independent | sin | 5 | NA |
| 236 | 31.64 | precipitation | 0.1 | 30 | < th | dose independent | sin | 5 | NA |
| 237 | 31.64 | precipitation | 0.1 | 30 | < th | dose dependent | sin | 5 | NA |
| 603 | 32.86 | wind | 5.0 | 90 | > th | dose independent | rect. | 3 | 4 |
| 771 | 33.50 | precipitation | 0.1 | 10 | > th | dose dependent | no | NA | NA |